RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 DNAJC5Q9H3Z4 198 aa10.54□□□□□ -0.72
SKP1-210ENST00000522855 KIF3CO14782 793 aa10.53□□□□□ -0.72
SKP1-210ENST00000522855 PLCB2Q00722 1185 aa10.53□□□□□ -0.72
SKP1-210ENST00000522855 POTEB3A0JP26 581 aa10.52□□□□□ -0.73
SKP1-210ENST00000522855 DOK7Q18PE1 504 aa10.52□□□□□ -0.73
SKP1-210ENST00000522855 POTEBQ6S5H4 581 aa10.52□□□□□ -0.73
SKP1-210ENST00000522855 PPP1R37O75864 691 aa10.51□□□□□ -0.73
SKP1-210ENST00000522855 HOXB1P14653 301 aaPredicted RBP10.51□□□□□ -0.73
SKP1-210ENST00000522855 EMP3P54852 163 aa10.51□□□□□ -0.73
SKP1-210ENST00000522855 NKX1-1Q15270 411 aaPredicted RBP10.49□□□□□ -0.73
SKP1-210ENST00000522855 HS3ST6Q96QI5 342 aa10.47□□□□□ -0.73
SKP1-210ENST00000522855 CHGAP10645 457 aaKnown RBP10.46□□□□□ -0.73
SKP1-210ENST00000522855 ZSWIM6Q9HCJ5 1215 aa10.46□□□□□ -0.73
SKP1-210ENST00000522855 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.46□□□□□ -0.73
SKP1-210ENST00000522855 C2orf72A6NCS6 295 aa10.45□□□□□ -0.74
SKP1-210ENST00000522855 GPR153Q6NV75 609 aa10.45□□□□□ -0.74
SKP1-210ENST00000522855 ZNF710Q8N1W2 664 aa10.44□□□□□ -0.74
SKP1-210ENST00000522855 BBXQ8WY36 941 aaPredicted RBP10.44□□□□□ -0.74
SKP1-210ENST00000522855 FAM205CA6NFA0 338 aa10.43□□□□□ -0.74
SKP1-210ENST00000522855 KRTAP3-3Q9BYR6 98 aa10.43□□□□□ -0.74
SKP1-210ENST00000522855 KRTAP3-2Q9BYR7 98 aa10.43□□□□□ -0.74
SKP1-210ENST00000522855 RIMBP2O15034 1052 aa10.42□□□□□ -0.74
SKP1-210ENST00000522855 HAP1P54257 671 aaPredicted RBP10.37□□□□□ -0.75
SKP1-210ENST00000522855 SLC34A2O95436 690 aa10.36□□□□□ -0.75
SKP1-210ENST00000522855 ARSIQ5FYB1 569 aa10.34□□□□□ -0.75
SKP1-210ENST00000522855 SPNS2Q8IVW8 549 aa10.34□□□□□ -0.75
SKP1-210ENST00000522855 TMC2Q8TDI7 906 aa10.34□□□□□ -0.75
SKP1-210ENST00000522855 KHSRPQ92945 711 aaKnown RBP eCLIP10.34□□□□□ -0.752e-7■■■□□ 16.3
SKP1-210ENST00000522855 ERBB3P21860 1342 aa10.33□□□□□ -0.76
SKP1-210ENST00000522855 VARS2Q5ST30 1063 aaKnown RBP10.33□□□□□ -0.76
SKP1-210ENST00000522855 FOXK1P85037 733 aa10.31□□□□□ -0.76
SKP1-210ENST00000522855 GPHNQ9NQX3 736 aaPredicted RBP10.31□□□□□ -0.76
SKP1-210ENST00000522855 GTPBP6O43824 516 aaPredicted RBP10.3□□□□□ -0.76
SKP1-210ENST00000522855 PAXIP1Q6ZW49 1069 aaPredicted RBP10.3□□□□□ -0.76
SKP1-210ENST00000522855 RYDENQ9NUL5 291 aaKnown RBP10.3□□□□□ -0.76
SKP1-210ENST00000522855 MMRN1Q13201 1228 aa10.29□□□□□ -0.76
SKP1-210ENST00000522855 PCDHGA4Q9Y5G9 962 aa10.29□□□□□ -0.76
SKP1-210ENST00000522855 KDM4FA0A1W2PPD8 638 aa10.28□□□□□ -0.76
SKP1-210ENST00000522855 ZNF316A6NFI3 1004 aaPredicted RBP10.28□□□□□ -0.76
SKP1-210ENST00000522855 SPRYD3Q8NCJ5 442 aa10.28□□□□□ -0.76
SKP1-210ENST00000522855 CFAP44Q96MT7 982 aa10.28□□□□□ -0.76
SKP1-210ENST00000522855 ZNF687Q8N1G0 1237 aa10.27□□□□□ -0.77
SKP1-210ENST00000522855 CRISPLD2Q9H0B8 497 aa10.27□□□□□ -0.77
SKP1-210ENST00000522855 DSG2Q14126 1118 aa10.26□□□□□ -0.77
SKP1-210ENST00000522855 NUDT7P0C024 238 aa10.25□□□□□ -0.77
SKP1-210ENST00000522855 PTCD2Q8WV60 388 aaKnown RBP10.25□□□□□ -0.77
SKP1-210ENST00000522855 PLPP6Q8IY26 295 aa10.24□□□□□ -0.77
SKP1-210ENST00000522855 VSIG10Q8N0Z9 540 aa10.24□□□□□ -0.77
SKP1-210ENST00000522855 NCKAP5LQ9HCH0 1330 aa10.24□□□□□ -0.77
SKP1-210ENST00000522855 LHX6Q9UPM6 363 aa10.21□□□□□ -0.77
SKP1-210ENST00000522855 POTEEQ6S8J3 1075 aa10.18□□□□□ -0.78
SKP1-210ENST00000522855 PPP1R15BQ5SWA1 713 aa10.16□□□□□ -0.78
SKP1-210ENST00000522855 OXER1Q8TDS5 423 aa10.16□□□□□ -0.78
SKP1-210ENST00000522855 MFSD10Q14728 455 aa10.14□□□□□ -0.79
SKP1-210ENST00000522855 CADPS2Q86UW7 1296 aa10.13□□□□□ -0.79
SKP1-210ENST00000522855 PBX2P40425 430 aa10.12□□□□□ -0.79
SKP1-210ENST00000522855 PDE4AP27815 886 aa10.11□□□□□ -0.79
SKP1-210ENST00000522855 LSM11P83369 360 aaKnown RBP eCLIP10.11□□□□□ -0.79
SKP1-210ENST00000522855 PSDA5PKW4 1024 aaPredicted RBP10.09□□□□□ -0.79
SKP1-210ENST00000522855 TSHZ2Q9NRE2 1034 aa10.08□□□□□ -0.8
SKP1-210ENST00000522855 DDX27Q96GQ7 796 aaKnown RBP10.07□□□□□ -0.8
SKP1-210ENST00000522855 TBC1D12O60347 775 aa10.06□□□□□ -0.8
SKP1-210ENST00000522855 UPF1Q92900 1129 aaKnown RBP eCLIP10.06□□□□□ -0.8
SKP1-210ENST00000522855 BCANQ96GW7 911 aa10.06□□□□□ -0.8
SKP1-210ENST00000522855 LARP6Q9BRS8 491 aaKnown RBP10.06□□□□□ -0.8
SKP1-210ENST00000522855 AXIN2Q9Y2T1 843 aa10.06□□□□□ -0.8
SKP1-210ENST00000522855 PTGER2P43116 358 aa10.05□□□□□ -0.8
SKP1-210ENST00000522855 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
SKP1-210ENST00000522855 KDM2AQ9Y2K7 1162 aa10.04□□□□□ -0.8
SKP1-210ENST00000522855 RNF166Q96A37 237 aaPredicted RBP10.03□□□□□ -0.8
SKP1-210ENST00000522855 MYT1LQ9UL68 1186 aa10.03□□□□□ -0.8
SKP1-210ENST00000522855 ARHGAP33O14559 1287 aa10.02□□□□□ -0.81
SKP1-210ENST00000522855 ANKRD13DQ6ZTN6 518 aa10.02□□□□□ -0.81
SKP1-210ENST00000522855 ANO8Q9HCE9 1232 aaPredicted RBP10.02□□□□□ -0.81
SKP1-210ENST00000522855 PPP4R3BQ5MIZ7 849 aa10.01□□□□□ -0.81
SKP1-210ENST00000522855 CAMK2BQ13554 666 aa10□□□□□ -0.81
SKP1-210ENST00000522855 DMRTA1Q5VZB9 504 aa9.99□□□□□ -0.81
SKP1-210ENST00000522855 PSEN2P49810 448 aa9.98□□□□□ -0.81
SKP1-210ENST00000522855 FOSBP53539 338 aa9.98□□□□□ -0.81
SKP1-210ENST00000522855 EVI5O60447 810 aa9.97□□□□□ -0.81
SKP1-210ENST00000522855 ADGRD1Q6QNK2 874 aa9.97□□□□□ -0.81
SKP1-210ENST00000522855 TK2O00142 265 aa9.96□□□□□ -0.82
SKP1-210ENST00000522855 HRO43593 1189 aa9.96□□□□□ -0.82
SKP1-210ENST00000522855 JPH4Q96JJ6 628 aa9.95□□□□□ -0.82
SKP1-210ENST00000522855 BCL2L12Q9HB09 334 aa9.95□□□□□ -0.82
SKP1-210ENST00000522855 ZNF454Q8N9F8 522 aa9.94□□□□□ -0.82
SKP1-210ENST00000522855 KCNK17Q96T54 332 aa9.92□□□□□ -0.82
SKP1-210ENST00000522855 MAP3K9P80192 1104 aa9.9□□□□□ -0.82
SKP1-210ENST00000522855 ADAM33Q9BZ11 813 aa9.89□□□□□ -0.83
SKP1-210ENST00000522855 SLC4A5Q9BY07 1137 aa9.88□□□□□ -0.83
SKP1-210ENST00000522855 ZDHHC16Q969W1 377 aa9.87□□□□□ -0.83
SKP1-210ENST00000522855 VPS9D1Q9Y2B5 631 aa9.87□□□□□ -0.83
SKP1-210ENST00000522855 PCDHGA10Q9Y5H3 936 aa9.87□□□□□ -0.83
SKP1-210ENST00000522855 DPYSL4O14531 572 aa9.85□□□□□ -0.83
SKP1-210ENST00000522855 NBR1Q14596 966 aa9.85□□□□□ -0.83
SKP1-210ENST00000522855 ZBED2Q9BTP6 218 aa9.85□□□□□ -0.83
SKP1-210ENST00000522855 PTPREP23469 700 aa9.84□□□□□ -0.83
SKP1-210ENST00000522855 PHF14O94880 888 aa9.83□□□□□ -0.84
SKP1-210ENST00000522855 KCNH8Q96L42 1107 aa9.83□□□□□ -0.84
SKP1-210ENST00000522855 BHMG1C9JSJ3 638 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms