RNA–Protein interactions for RNA: ENST00000522651.6

GABRA1-208, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-208ENST00000522651 RIMBP2O15034 1052 aa12.8□□□□□ -0.36
GABRA1-208ENST00000522651 HOXB1P14653 301 aaPredicted RBP12.8□□□□□ -0.36
GABRA1-208ENST00000522651 RNF166Q96A37 237 aaPredicted RBP12.74□□□□□ -0.37
GABRA1-208ENST00000522651 VARS2Q5ST30 1063 aaKnown RBP12.73□□□□□ -0.37
GABRA1-208ENST00000522651 EFCAB3Q8N7B9 438 aa12.7□□□□□ -0.38
GABRA1-208ENST00000522651 IFNLR1Q8IU57 520 aaPredicted RBP12.69□□□□□ -0.38
GABRA1-208ENST00000522651 MYT1LQ9UL68 1186 aa12.67□□□□□ -0.38
GABRA1-208ENST00000522651 NCAPD3P42695 1498 aa12.64□□□□□ -0.39
GABRA1-208ENST00000522651 MICALL2Q8IY33 904 aa12.61□□□□□ -0.39
GABRA1-208ENST00000522651 DNAJC5Q9H3Z4 198 aa12.61□□□□□ -0.39
GABRA1-208ENST00000522651 ZSWIM6Q9HCJ5 1215 aa12.61□□□□□ -0.39
GABRA1-208ENST00000522651 ZNF687Q8N1G0 1237 aa12.6□□□□□ -0.39
GABRA1-208ENST00000522651 TRIM41Q8WV44 630 aa12.6□□□□□ -0.39
GABRA1-208ENST00000522651 SMARCA4P51532 1647 aa12.58□□□□□ -0.4
GABRA1-208ENST00000522651 ATAD2BQ9ULI0 1458 aa12.58□□□□□ -0.4
GABRA1-208ENST00000522651 SMARCA2P51531 1590 aa12.57□□□□□ -0.4
GABRA1-208ENST00000522651 CUX2O14529 1486 aa12.57□□□□□ -0.4
GABRA1-208ENST00000522651 HMGXB3Q12766 1538 aa12.56□□□□□ -0.4
GABRA1-208ENST00000522651 TMEM92Q6UXU6 159 aa12.55□□□□□ -0.4
GABRA1-208ENST00000522651 ANKRD13DQ6ZTN6 518 aa12.55□□□□□ -0.4
GABRA1-208ENST00000522651 ERCC6Q03468 1493 aa12.54□□□□□ -0.4
GABRA1-208ENST00000522651 SOX12O15370 315 aa12.54□□□□□ -0.4
GABRA1-208ENST00000522651 PTGER2P43116 358 aa12.53□□□□□ -0.4
GABRA1-208ENST00000522651 GPR153Q6NV75 609 aa12.53□□□□□ -0.4
GABRA1-208ENST00000522651 ARSIQ5FYB1 569 aa12.51□□□□□ -0.41
GABRA1-208ENST00000522651 BAZ1AQ9NRL2 1556 aaPredicted RBP12.5□□□□□ -0.41
GABRA1-208ENST00000522651 PHF8Q9UPP1 1060 aa12.48□□□□□ -0.41
GABRA1-208ENST00000522651 RIOK3O14730 519 aaKnown RBP12.47□□□□□ -0.41
GABRA1-208ENST00000522651 PEG3Q9GZU2 1588 aa12.47□□□□□ -0.41
GABRA1-208ENST00000522651 BAZ1BQ9UIG0 1483 aaKnown RBP12.46□□□□□ -0.41
GABRA1-208ENST00000522651 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.45□□□□□ -0.42
GABRA1-208ENST00000522651 ZFP91Q96JP5 570 aaPredicted RBP12.45□□□□□ -0.42
GABRA1-208ENST00000522651 NESP48681 1621 aa12.44□□□□□ -0.42
GABRA1-208ENST00000522651 MS4A4AQ96JQ5 239 aa12.44□□□□□ -0.42
GABRA1-208ENST00000522651 ZNF316A6NFI3 1004 aaPredicted RBP12.43□□□□□ -0.42
GABRA1-208ENST00000522651 VGFO15240 615 aaPredicted RBP12.42□□□□□ -0.42
GABRA1-208ENST00000522651 KHSRPQ92945 711 aaKnown RBP eCLIP12.42□□□□□ -0.42
GABRA1-208ENST00000522651 LAMC3Q9Y6N6 1575 aa12.39□□□□□ -0.43
GABRA1-208ENST00000522651 LSM11P83369 360 aaKnown RBP eCLIP12.39□□□□□ -0.43
GABRA1-208ENST00000522651 THOC2Q8NI27 1593 aaKnown RBP12.39□□□□□ -0.43
GABRA1-208ENST00000522651 NLRP6P59044 892 aa12.37□□□□□ -0.43
GABRA1-208ENST00000522651 MROH2BQ7Z745 1585 aa12.37□□□□□ -0.43
GABRA1-208ENST00000522651 RNF25Q96BH1 459 aaPredicted RBP12.35□□□□□ -0.43
GABRA1-208ENST00000522651 KIF21AQ7Z4S6 1674 aa12.35□□□□□ -0.43
GABRA1-208ENST00000522651 NUDT7P0C024 238 aa12.32□□□□□ -0.44
GABRA1-208ENST00000522651 TAOK2Q9UL54 1235 aa12.31□□□□□ -0.44
GABRA1-208ENST00000522651 PDS5BQ9NTI5 1447 aa12.29□□□□□ -0.44
GABRA1-208ENST00000522651 PBX2P40425 430 aa12.29□□□□□ -0.44
GABRA1-208ENST00000522651 BCL11BQ9C0K0 894 aaPredicted RBP12.28□□□□□ -0.44
GABRA1-208ENST00000522651 STK24Q9Y6E0 443 aa12.28□□□□□ -0.44
GABRA1-208ENST00000522651 PLA2G2EQ9NZK7 142 aa12.27□□□□□ -0.45
GABRA1-208ENST00000522651 AXIN2Q9Y2T1 843 aa12.27□□□□□ -0.45
GABRA1-208ENST00000522651 WIZO95785 1651 aa12.26□□□□□ -0.45
GABRA1-208ENST00000522651 C2orf72A6NCS6 295 aa12.25□□□□□ -0.45
GABRA1-208ENST00000522651 LHX6Q9UPM6 363 aa12.25□□□□□ -0.45
GABRA1-208ENST00000522651 FBXO22Q8NEZ5 403 aa12.24□□□□□ -0.45
GABRA1-208ENST00000522651 HCSTQ9UBK5 93 aa12.24□□□□□ -0.45
GABRA1-208ENST00000522651 CADPSQ9ULU8 1353 aa12.23□□□□□ -0.45
GABRA1-208ENST00000522651 PCDHGA4Q9Y5G9 962 aa12.21□□□□□ -0.45
GABRA1-208ENST00000522651 TMC2Q8TDI7 906 aa12.2□□□□□ -0.46
GABRA1-208ENST00000522651 MRC2Q9UBG0 1479 aa12.2□□□□□ -0.46
GABRA1-208ENST00000522651 STK25O00506 426 aa12.19□□□□□ -0.46
GABRA1-208ENST00000522651 WDR62O43379 1518 aa12.19□□□□□ -0.46
GABRA1-208ENST00000522651 MFRPQ9BY79 579 aa12.18□□□□□ -0.46
GABRA1-208ENST00000522651 KIF3CO14782 793 aa12.17□□□□□ -0.46
GABRA1-208ENST00000522651 POTEEQ6S8J3 1075 aa12.16□□□□□ -0.46
GABRA1-208ENST00000522651 ADGRD1Q6QNK2 874 aa12.15□□□□□ -0.46
GABRA1-208ENST00000522651 ARHGAP33O14559 1287 aa12.14□□□□□ -0.47
GABRA1-208ENST00000522651 SLC34A2O95436 690 aa12.14□□□□□ -0.47
GABRA1-208ENST00000522651 STAC3Q96MF2 364 aa12.13□□□□□ -0.47
GABRA1-208ENST00000522651 CEP164Q9UPV0 1460 aa12.13□□□□□ -0.47
GABRA1-208ENST00000522651 PSDA5PKW4 1024 aaPredicted RBP12.12□□□□□ -0.47
GABRA1-208ENST00000522651 FANCD2Q9BXW9 1451 aa12.1□□□□□ -0.47
GABRA1-208ENST00000522651 CFTRP13569 1480 aa12.09□□□□□ -0.47
GABRA1-208ENST00000522651 TOP2AP11388 1531 aaKnown RBP12.09□□□□□ -0.47
GABRA1-208ENST00000522651 PRDM2Q13029 1718 aa12.07□□□□□ -0.48
GABRA1-208ENST00000522651 RSF1Q96T23 1441 aaPredicted RBP12.07□□□□□ -0.48
GABRA1-208ENST00000522651 KCTD12Q96CX2 325 aaKnown RBP12.05□□□□□ -0.48
GABRA1-208ENST00000522651 ECM2O94769 699 aaPredicted RBP12.04□□□□□ -0.48
GABRA1-208ENST00000522651 TK2O00142 265 aa12.03□□□□□ -0.48
GABRA1-208ENST00000522651 PSEN2P49810 448 aa12.03□□□□□ -0.48
GABRA1-208ENST00000522651 KCNH8Q96L42 1107 aa12.02□□□□□ -0.49
GABRA1-208ENST00000522651 DMRTA1Q5VZB9 504 aa12.01□□□□□ -0.49
GABRA1-208ENST00000522651 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
GABRA1-208ENST00000522651 PPP4R3BQ5MIZ7 849 aa12□□□□□ -0.49
GABRA1-208ENST00000522651 HRO43593 1189 aa11.97□□□□□ -0.49
GABRA1-208ENST00000522651 TBC1D12O60347 775 aa11.96□□□□□ -0.49
GABRA1-208ENST00000522651 PTPN5P54829 565 aa11.95□□□□□ -0.5
GABRA1-208ENST00000522651 PTCD2Q8WV60 388 aaKnown RBP11.95□□□□□ -0.5
GABRA1-208ENST00000522651 PPP1R37O75864 691 aa11.94□□□□□ -0.5
GABRA1-208ENST00000522651 PLPP6Q8IY26 295 aa11.93□□□□□ -0.5
GABRA1-208ENST00000522651 KCNK17Q96T54 332 aa11.93□□□□□ -0.5
GABRA1-208ENST00000522651 CCDC88BA6NC98 1476 aa11.93□□□□□ -0.5
GABRA1-208ENST00000522651 IFT140Q96RY7 1462 aa11.89□□□□□ -0.51
GABRA1-208ENST00000522651 KDM4FA0A1W2PPD8 638 aa11.89□□□□□ -0.51
GABRA1-208ENST00000522651 RGL2O15211 777 aa11.88□□□□□ -0.51
GABRA1-208ENST00000522651 FOXK1P85037 733 aa11.88□□□□□ -0.51
GABRA1-208ENST00000522651 TOPBP1Q92547 1522 aa11.87□□□□□ -0.51
GABRA1-208ENST00000522651 ZNF608Q9ULD9 1512 aaPredicted RBP11.86□□□□□ -0.51
GABRA1-208ENST00000522651 ABCC8Q09428 1581 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms