RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 SCAPERQ9BY12 1400 aa23.18■■□□□ 1.3
HMBOX1-209ENST00000522468 ATP1B4Q9UN42 357 aaPredicted RBP23.17■■□□□ 1.3
HMBOX1-209ENST00000522468 CDK11AQ9UQ88 783 aaPredicted RBP23.17■■□□□ 1.3
HMBOX1-209ENST00000522468 PCF11O94913 1555 aaKnown RBP23.17■■□□□ 1.3
HMBOX1-209ENST00000522468 RIMS1Q86UR5 1692 aaKnown RBP23.16■■□□□ 1.3
HMBOX1-209ENST00000522468 ARID4BQ4LE39 1312 aaPredicted RBP23.15■■□□□ 1.3
HMBOX1-209ENST00000522468 CASKIN1Q8WXD9 1431 aa23.15■■□□□ 1.3
HMBOX1-209ENST00000522468 CDC42BPBQ9Y5S2 1711 aa23.13■■□□□ 1.29
HMBOX1-209ENST00000522468 EFCAB2Q5VUJ9 269 aa23.12■■□□□ 1.29
HMBOX1-209ENST00000522468 ILDR1Q86SU0 546 aaPredicted RBP23.11■■□□□ 1.29
HMBOX1-209ENST00000522468 CCDC18Q5T9S5 1454 aa23.11■■□□□ 1.29
HMBOX1-209ENST00000522468 KDM5CP41229 1560 aa23.1■■□□□ 1.29
HMBOX1-209ENST00000522468 CLIP1P30622 1438 aa23.1■■□□□ 1.29
HMBOX1-209ENST00000522468 ARHGAP5Q13017 1502 aa23.08■■□□□ 1.29
HMBOX1-209ENST00000522468 LMTK3Q96Q04 1460 aa23.08■■□□□ 1.29
HMBOX1-209ENST00000522468 PREX2Q70Z35 1606 aa23.08■■□□□ 1.28
HMBOX1-209ENST00000522468 ZNF518AQ6AHZ1 1483 aa23.07■■□□□ 1.28
HMBOX1-209ENST00000522468 ATP10AO60312 1499 aa23.06■■□□□ 1.28
HMBOX1-209ENST00000522468 FER1L4A9Z1Z3 1794 aa23.06■■□□□ 1.28
HMBOX1-209ENST00000522468 FYCO1Q9BQS8 1478 aa23.05■■□□□ 1.28
HMBOX1-209ENST00000522468 C9orf84Q5VXU9 1444 aa23.04■■□□□ 1.28
HMBOX1-209ENST00000522468 ARHGEF12Q9NZN5 1544 aa23.03■■□□□ 1.28
HMBOX1-209ENST00000522468 CDC42BPAQ5VT25 1732 aa23.03■■□□□ 1.28
HMBOX1-209ENST00000522468 ABCC1P33527 1531 aa23.01■■□□□ 1.27
HMBOX1-209ENST00000522468 AFAP1Q8N556 730 aa23■■□□□ 1.27
HMBOX1-209ENST00000522468 DIP2CQ9Y2E4 1556 aa23■■□□□ 1.27
HMBOX1-209ENST00000522468 ITSN2Q9NZM3 1697 aa23■■□□□ 1.27
HMBOX1-209ENST00000522468 REREQ9P2R6 1566 aa22.99■■□□□ 1.27
HMBOX1-209ENST00000522468 MLH3Q9UHC1 1453 aa22.98■■□□□ 1.27
HMBOX1-209ENST00000522468 ABCA6Q8N139 1617 aa22.97■■□□□ 1.27
HMBOX1-209ENST00000522468 MLECQ14165 292 aa22.95■■□□□ 1.26
HMBOX1-209ENST00000522468 TRAPPC8Q9Y2L5 1435 aa22.95■■□□□ 1.26
HMBOX1-209ENST00000522468 KIDINS220Q9ULH0 1771 aa22.92■■□□□ 1.26
HMBOX1-209ENST00000522468 SAMD9LQ8IVG5 1584 aa22.9■■□□□ 1.26
HMBOX1-209ENST00000522468 GPATCH8Q9UKJ3 1502 aaKnown RBP22.9■■□□□ 1.26
HMBOX1-209ENST00000522468 AGLP35573 1532 aa22.88■■□□□ 1.25
HMBOX1-209ENST00000522468 PREX1Q8TCU6 1659 aa22.87■■□□□ 1.25
HMBOX1-209ENST00000522468 HSPA2P54652 639 aa22.86■■□□□ 1.25
HMBOX1-209ENST00000522468 PLPPR3Q6T4P5 718 aa22.85■■□□□ 1.25
HMBOX1-209ENST00000522468 SYCP2Q9BX26 1530 aa22.83■■□□□ 1.25
HMBOX1-209ENST00000522468 SETD1BQ9UPS6 1966 aaKnown RBP22.81■■□□□ 1.24
HMBOX1-209ENST00000522468 C3P01024 1663 aa22.81■■□□□ 1.24
HMBOX1-209ENST00000522468 CEBPAP49715 358 aaPredicted RBP22.8■■□□□ 1.24
HMBOX1-209ENST00000522468 KIAA1107Q9UPP5 1409 aa22.79■■□□□ 1.24
HMBOX1-209ENST00000522468 FBXO41Q8TF61 875 aa22.78■■□□□ 1.24
HMBOX1-209ENST00000522468 MYT1LQ9UL68 1186 aa22.78■■□□□ 1.24
HMBOX1-209ENST00000522468 INO80Q9ULG1 1556 aaPredicted RBP22.77■■□□□ 1.24
HMBOX1-209ENST00000522468 CEP162Q5TB80 1403 aa22.76■■□□□ 1.23
HMBOX1-209ENST00000522468 TIAM1Q13009 1591 aa22.76■■□□□ 1.23
HMBOX1-209ENST00000522468 PLEKHH2Q8IVE3 1493 aa22.75■■□□□ 1.23
HMBOX1-209ENST00000522468 ZNF777Q9ULD5 760 aaPredicted RBP22.75■■□□□ 1.23
HMBOX1-209ENST00000522468 EHBP1L1Q8N3D4 1523 aa22.75■■□□□ 1.23
HMBOX1-209ENST00000522468 MTUS2Q5JR59 1369 aa22.75■■□□□ 1.23
HMBOX1-209ENST00000522468 ATP7AQ04656 1500 aa22.74■■□□□ 1.23
HMBOX1-209ENST00000522468 PLXNC1O60486 1568 aa22.74■■□□□ 1.23
HMBOX1-209ENST00000522468 CCNB3Q8WWL7 1395 aa22.74■■□□□ 1.23
HMBOX1-209ENST00000522468 STRCQ7RTU9 1775 aa22.73■■□□□ 1.23
HMBOX1-209ENST00000522468 HNRNPMP52272 730 aaKnown RBP eCLIP22.73■■□□□ 1.231e-6■□□□□ 9.7
HMBOX1-209ENST00000522468 CFDP1Q9UEE9 299 aaPredicted RBP22.72■■□□□ 1.23
HMBOX1-209ENST00000522468 SPAG9O60271 1321 aaKnown RBP22.71■■□□□ 1.23
HMBOX1-209ENST00000522468 MROH2AA6NES4 1674 aa22.71■■□□□ 1.23
HMBOX1-209ENST00000522468 UHRF1BP1Q6BDS2 1440 aa22.7■■□□□ 1.22
HMBOX1-209ENST00000522468 SUPT6HQ7KZ85 1726 aaKnown RBP22.7■■□□□ 1.22
HMBOX1-209ENST00000522468 CNTLNQ9NXG0 1405 aa22.69■■□□□ 1.22
HMBOX1-209ENST00000522468 MBD5Q9P267 1494 aa22.68■■□□□ 1.22
HMBOX1-209ENST00000522468 A2MP01023 1474 aa22.65■■□□□ 1.22
HMBOX1-209ENST00000522468 ADGBQ8N7X0 1667 aa22.65■■□□□ 1.22
HMBOX1-209ENST00000522468 ZNF644Q9H582 1327 aaPredicted RBP22.64■■□□□ 1.22
HMBOX1-209ENST00000522468 ESF1Q9H501 851 aaKnown RBP22.61■■□□□ 1.21
HMBOX1-209ENST00000522468 CLTCQ00610 1675 aaKnown RBP22.61■■□□□ 1.21
HMBOX1-209ENST00000522468 NCOA2Q15596 1464 aa22.6■■□□□ 1.21
HMBOX1-209ENST00000522468 NPATQ14207 1427 aa22.6■■□□□ 1.21
HMBOX1-209ENST00000522468 RTEL1-TNFRSF6BF6WH68 1400 aa22.58■■□□□ 1.21
HMBOX1-209ENST00000522468 ZMYM3Q14202 1370 aa22.58■■□□□ 1.21
HMBOX1-209ENST00000522468 CERKQ8TCT0 537 aa22.57■■□□□ 1.2
HMBOX1-209ENST00000522468 DMRT2Q9Y5R5 561 aa22.55■■□□□ 1.2
HMBOX1-209ENST00000522468 PTPRTO14522 1441 aa22.55■■□□□ 1.2
HMBOX1-209ENST00000522468 CAMSAP2Q08AD1 1489 aa22.54■■□□□ 1.2
HMBOX1-209ENST00000522468 VPS8Q8N3P4 1428 aa22.54■■□□□ 1.2
HMBOX1-209ENST00000522468 ZNF142P52746 1687 aaPredicted RBP22.53■■□□□ 1.2
HMBOX1-209ENST00000522468 NCOA1Q15788 1441 aa22.53■■□□□ 1.2
HMBOX1-209ENST00000522468 CCDC141Q6ZP82 1450 aa22.53■■□□□ 1.2
HMBOX1-209ENST00000522468 PTPRKQ15262 1439 aa22.52■■□□□ 1.2
HMBOX1-209ENST00000522468 MYO3AQ8NEV4 1616 aa22.52■■□□□ 1.2
HMBOX1-209ENST00000522468 DHX29Q7Z478 1369 aaKnown RBP22.5■■□□□ 1.19
HMBOX1-209ENST00000522468 ARHGEF5Q12774 1597 aa22.5■■□□□ 1.19
HMBOX1-209ENST00000522468 LRRC9Q6ZRR7 1453 aa22.5■■□□□ 1.19
HMBOX1-209ENST00000522468 LOC105371045A0A1W2PR82 267 aa22.5■■□□□ 1.19
HMBOX1-209ENST00000522468 PPP6R1Q9UPN7 881 aa22.5■■□□□ 1.19
HMBOX1-209ENST00000522468 CAMSAP1Q5T5Y3 1602 aa22.49■■□□□ 1.19
HMBOX1-209ENST00000522468 GGT6Q6P531 493 aa22.48■■□□□ 1.19
HMBOX1-209ENST00000522468 MAP3K1Q13233 1512 aa22.47■■□□□ 1.19
HMBOX1-209ENST00000522468 LTBP4Q8N2S1 1624 aa22.46■■□□□ 1.19
HMBOX1-209ENST00000522468 CEP170BQ9Y4F5 1589 aaPredicted RBP22.46■■□□□ 1.19
HMBOX1-209ENST00000522468 RSPH4AQ5TD94 716 aa22.45■■□□□ 1.18
HMBOX1-209ENST00000522468 FAM135AQ9P2D6 1515 aa22.44■■□□□ 1.18
HMBOX1-209ENST00000522468 PLA2R1Q13018 1463 aa22.41■■□□□ 1.18
HMBOX1-209ENST00000522468 MAST1Q9Y2H9 1570 aa22.41■■□□□ 1.18
HMBOX1-209ENST00000522468 TCOF1Q13428 1488 aaKnown RBP22.4■■□□□ 1.18
HMBOX1-209ENST00000522468 KANK4Q5T7N3 995 aaPredicted RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms