RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 FYCO1Q9BQS8 1478 aa33.51■■■□□ 2.96
SDCBP-209ENST00000522243 BCORL1Q5H9F3 1711 aa33.51■■■□□ 2.96
SDCBP-209ENST00000522243 ARHGAP5Q13017 1502 aa33.51■■■□□ 2.95
SDCBP-209ENST00000522243 YEATS2Q9ULM3 1422 aa33.5■■■□□ 2.95
SDCBP-209ENST00000522243 ZFYVE16Q7Z3T8 1539 aa33.49■■■□□ 2.95
SDCBP-209ENST00000522243 POGZQ7Z3K3 1410 aa33.49■■■□□ 2.95
SDCBP-209ENST00000522243 HECW2Q9P2P5 1572 aa33.47■■■□□ 2.95
SDCBP-209ENST00000522243 CDC42BPBQ9Y5S2 1711 aa33.46■■■□□ 2.95
SDCBP-209ENST00000522243 MAGI2Q86UL8 1455 aa33.44■■■□□ 2.94
SDCBP-209ENST00000522243 MADDQ8WXG6 1647 aa33.43■■■□□ 2.94
SDCBP-209ENST00000522243 PTPRMP28827 1452 aa33.42■■■□□ 2.94
SDCBP-209ENST00000522243 SIGLEC1Q9BZZ2 1709 aa33.42■■■□□ 2.94
SDCBP-209ENST00000522243 PREX2Q70Z35 1606 aa33.39■■■□□ 2.94
SDCBP-209ENST00000522243 AFAP1Q8N556 730 aa33.35■■■□□ 2.93
SDCBP-209ENST00000522243 CDC42BPAQ5VT25 1732 aa33.35■■■□□ 2.93
SDCBP-209ENST00000522243 RIMS1Q86UR5 1692 aaKnown RBP33.34■■■□□ 2.93
SDCBP-209ENST00000522243 ZNF518AQ6AHZ1 1483 aa33.33■■■□□ 2.93
SDCBP-209ENST00000522243 CEP162Q5TB80 1403 aa33.33■■■□□ 2.93
SDCBP-209ENST00000522243 MLECQ14165 292 aa33.32■■■□□ 2.92
SDCBP-209ENST00000522243 MYT1LQ9UL68 1186 aa33.3■■■□□ 2.92
SDCBP-209ENST00000522243 ATP10AO60312 1499 aa33.3■■■□□ 2.92
SDCBP-209ENST00000522243 KDM5CP41229 1560 aa33.29■■■□□ 2.92
SDCBP-209ENST00000522243 ABCC1P33527 1531 aa33.27■■■□□ 2.92
SDCBP-209ENST00000522243 ARHGEF12Q9NZN5 1544 aa33.27■■■□□ 2.92
SDCBP-209ENST00000522243 C9orf84Q5VXU9 1444 aa33.26■■■□□ 2.91
SDCBP-209ENST00000522243 ITSN2Q9NZM3 1697 aa33.26■■■□□ 2.91
SDCBP-209ENST00000522243 PLPPR3Q6T4P5 718 aa33.25■■■□□ 2.91
SDCBP-209ENST00000522243 LOC105371045A0A1W2PR82 267 aa33.24■■■□□ 2.91
SDCBP-209ENST00000522243 ZNF777Q9ULD5 760 aaPredicted RBP33.24■■■□□ 2.91
SDCBP-209ENST00000522243 TRAPPC8Q9Y2L5 1435 aa33.24■■■□□ 2.91
SDCBP-209ENST00000522243 GPATCH8Q9UKJ3 1502 aaKnown RBP33.22■■■□□ 2.91
SDCBP-209ENST00000522243 MTUS2Q5JR59 1369 aa33.21■■■□□ 2.91
SDCBP-209ENST00000522243 FER1L4A9Z1Z3 1794 aa33.19■■■□□ 2.9
SDCBP-209ENST00000522243 SAMD9LQ8IVG5 1584 aa33.17■■■□□ 2.9
SDCBP-209ENST00000522243 DIP2CQ9Y2E4 1556 aa33.17■■■□□ 2.9
SDCBP-209ENST00000522243 MLH3Q9UHC1 1453 aa33.16■■■□□ 2.9
SDCBP-209ENST00000522243 ABCA6Q8N139 1617 aa33.15■■■□□ 2.9
SDCBP-209ENST00000522243 CCNB3Q8WWL7 1395 aa33.14■■■□□ 2.9
SDCBP-209ENST00000522243 CFDP1Q9UEE9 299 aaPredicted RBP33.11■■■□□ 2.89
SDCBP-209ENST00000522243 SYCP2Q9BX26 1530 aa33.11■■■□□ 2.89
SDCBP-209ENST00000522243 KIDINS220Q9ULH0 1771 aa33.09■■■□□ 2.89
SDCBP-209ENST00000522243 EHBP1L1Q8N3D4 1523 aa33.09■■■□□ 2.89
SDCBP-209ENST00000522243 HNRNPMP52272 730 aaKnown RBP eCLIP33.09■■■□□ 2.89
SDCBP-209ENST00000522243 REREQ9P2R6 1566 aa33.06■■■□□ 2.88
SDCBP-209ENST00000522243 LMTK3Q96Q04 1460 aa33.05■■■□□ 2.88
SDCBP-209ENST00000522243 TIAM1Q13009 1591 aa33.04■■■□□ 2.88
SDCBP-209ENST00000522243 PLEKHH2Q8IVE3 1493 aa32.99■■■□□ 2.87
SDCBP-209ENST00000522243 CEBPAP49715 358 aaPredicted RBP32.99■■■□□ 2.87
SDCBP-209ENST00000522243 KIAA1107Q9UPP5 1409 aa32.99■■■□□ 2.87
SDCBP-209ENST00000522243 SPAG9O60271 1321 aaKnown RBP32.99■■■□□ 2.87
SDCBP-209ENST00000522243 ZNF644Q9H582 1327 aaPredicted RBP32.98■■■□□ 2.87
SDCBP-209ENST00000522243 AGLP35573 1532 aa32.97■■■□□ 2.87
SDCBP-209ENST00000522243 HSPA2P54652 639 aa32.96■■■□□ 2.87
SDCBP-209ENST00000522243 VPS8Q8N3P4 1428 aa32.95■■■□□ 2.87
SDCBP-209ENST00000522243 SUPT6HQ7KZ85 1726 aaKnown RBP32.93■■■□□ 2.86
SDCBP-209ENST00000522243 ATP7AQ04656 1500 aa32.92■■■□□ 2.86
SDCBP-209ENST00000522243 NCOA2Q15596 1464 aa32.91■■■□□ 2.86
SDCBP-209ENST00000522243 INO80Q9ULG1 1556 aaPredicted RBP32.89■■■□□ 2.86
SDCBP-209ENST00000522243 ILDR1Q86SU0 546 aaPredicted RBP32.89■■■□□ 2.86
SDCBP-209ENST00000522243 ESF1Q9H501 851 aaKnown RBP32.87■■■□□ 2.85
SDCBP-209ENST00000522243 MBD5Q9P267 1494 aa32.84■■■□□ 2.85
SDCBP-209ENST00000522243 C3P01024 1663 aa32.84■■■□□ 2.85
SDCBP-209ENST00000522243 PREX1Q8TCU6 1659 aa32.83■■■□□ 2.85
SDCBP-209ENST00000522243 LRRC9Q6ZRR7 1453 aa32.81■■■□□ 2.84
SDCBP-209ENST00000522243 A2MP01023 1474 aa32.8■■■□□ 2.84
SDCBP-209ENST00000522243 CAMSAP2Q08AD1 1489 aa32.78■■■□□ 2.84
SDCBP-209ENST00000522243 PLXNC1O60486 1568 aa32.77■■■□□ 2.84
SDCBP-209ENST00000522243 KANK4Q5T7N3 995 aaPredicted RBP32.76■■■□□ 2.83
SDCBP-209ENST00000522243 ADGBQ8N7X0 1667 aa32.75■■■□□ 2.83
SDCBP-209ENST00000522243 SETD1BQ9UPS6 1966 aaKnown RBP32.73■■■□□ 2.83
SDCBP-209ENST00000522243 CNTLNQ9NXG0 1405 aa32.73■■■□□ 2.83
SDCBP-209ENST00000522243 UHRF1BP1Q6BDS2 1440 aa32.71■■■□□ 2.83
SDCBP-209ENST00000522243 MAP3K1Q13233 1512 aa32.71■■■□□ 2.83
SDCBP-209ENST00000522243 RTEL1-TNFRSF6BF6WH68 1400 aa32.7■■■□□ 2.83
SDCBP-209ENST00000522243 CCDC141Q6ZP82 1450 aa32.7■■■□□ 2.83
SDCBP-209ENST00000522243 GGT6Q6P531 493 aa32.7■■■□□ 2.83
SDCBP-209ENST00000522243 CLTCQ00610 1675 aaKnown RBP32.68■■■□□ 2.82
SDCBP-209ENST00000522243 MROH2AA6NES4 1674 aa32.67■■■□□ 2.82
SDCBP-209ENST00000522243 ZMYM3Q14202 1370 aa32.65■■■□□ 2.82
SDCBP-209ENST00000522243 RSPH4AQ5TD94 716 aa32.64■■■□□ 2.82
SDCBP-209ENST00000522243 ARHGEF5Q12774 1597 aa32.62■■■□□ 2.81
SDCBP-209ENST00000522243 DHX29Q7Z478 1369 aaKnown RBP32.61■■■□□ 2.81
SDCBP-209ENST00000522243 APLP2Q06481 763 aa32.59■■■□□ 2.81
SDCBP-209ENST00000522243 STRCQ7RTU9 1775 aa32.58■■■□□ 2.81
SDCBP-209ENST00000522243 TSPY4P0CV99 314 aa32.57■■■□□ 2.8
SDCBP-209ENST00000522243 TSPY10P0CW01 314 aa32.57■■■□□ 2.8
SDCBP-209ENST00000522243 MYOM3Q5VTT5 1437 aa32.56■■■□□ 2.8
SDCBP-209ENST00000522243 KIF3BO15066 747 aa32.55■■■□□ 2.8
SDCBP-209ENST00000522243 NPATQ14207 1427 aa32.53■■■□□ 2.8
SDCBP-209ENST00000522243 MIA2Q96PC5 1412 aa32.51■■■□□ 2.8
SDCBP-209ENST00000522243 FBXO41Q8TF61 875 aa32.51■■■□□ 2.79
SDCBP-209ENST00000522243 PPP6R1Q9UPN7 881 aa32.51■■■□□ 2.79
SDCBP-209ENST00000522243 PTPRKQ15262 1439 aa32.48■■■□□ 2.79
SDCBP-209ENST00000522243 MAST1Q9Y2H9 1570 aa32.45■■■□□ 2.79
SDCBP-209ENST00000522243 DMRT2Q9Y5R5 561 aa32.45■■■□□ 2.79
SDCBP-209ENST00000522243 MYO3AQ8NEV4 1616 aa32.43■■■□□ 2.78
SDCBP-209ENST00000522243 CAMSAP1Q5T5Y3 1602 aa32.4■■■□□ 2.78
SDCBP-209ENST00000522243 PTPN23Q9H3S7 1636 aa32.39■■■□□ 2.78
SDCBP-209ENST00000522243 KDM5DQ9BY66 1539 aa32.38■■■□□ 2.77
SDCBP-209ENST00000522243 WASHC2CQ9Y4E1 1318 aa32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms