RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 PHLDB1Q86UU1 1377 aa10.83□□□□□ -0.68
SPIDR-218ENST00000522222 PREX2Q70Z35 1606 aa10.83□□□□□ -0.68
SPIDR-218ENST00000522222 PLCH2O75038 1416 aa10.83□□□□□ -0.68
SPIDR-218ENST00000522222 AKNAQ7Z591 1439 aa10.82□□□□□ -0.68
SPIDR-218ENST00000522222 ARHGAP5Q13017 1502 aa10.81□□□□□ -0.68
SPIDR-218ENST00000522222 EHBP1L1Q8N3D4 1523 aa10.81□□□□□ -0.68
SPIDR-218ENST00000522222 RICTORQ6R327 1708 aa10.81□□□□□ -0.68
SPIDR-218ENST00000522222 DENND4BO75064 1496 aaPredicted RBP10.8□□□□□ -0.68
SPIDR-218ENST00000522222 ADGRL1O94910 1474 aa10.8□□□□□ -0.68
SPIDR-218ENST00000522222 ARHGEF40Q8TER5 1519 aa10.79□□□□□ -0.68
SPIDR-218ENST00000522222 CDC42BPAQ5VT25 1732 aa10.79□□□□□ -0.68
SPIDR-218ENST00000522222 CDC42BPBQ9Y5S2 1711 aa10.79□□□□□ -0.68
SPIDR-218ENST00000522222 TIAM1Q13009 1591 aa10.79□□□□□ -0.68
SPIDR-218ENST00000522222 ZMYM4Q5VZL5 1548 aa10.79□□□□□ -0.68
SPIDR-218ENST00000522222 MTUS2Q5JR59 1369 aa10.78□□□□□ -0.68
SPIDR-218ENST00000522222 POGZQ7Z3K3 1410 aa10.78□□□□□ -0.68
SPIDR-218ENST00000522222 RAPGEF3O95398 923 aa10.77□□□□□ -0.69
SPIDR-218ENST00000522222 ABCC1P33527 1531 aa10.77□□□□□ -0.69
SPIDR-218ENST00000522222 SCAPERQ9BY12 1400 aa10.75□□□□□ -0.69
SPIDR-218ENST00000522222 EFCAB2Q5VUJ9 269 aa10.75□□□□□ -0.69
SPIDR-218ENST00000522222 ZFYVE16Q7Z3T8 1539 aa10.74□□□□□ -0.69
SPIDR-218ENST00000522222 GPATCH8Q9UKJ3 1502 aaKnown RBP10.74□□□□□ -0.69
SPIDR-218ENST00000522222 SAMD9LQ8IVG5 1584 aa10.74□□□□□ -0.69
SPIDR-218ENST00000522222 ITSN2Q9NZM3 1697 aa10.74□□□□□ -0.69
SPIDR-218ENST00000522222 KDM5CP41229 1560 aa10.73□□□□□ -0.69
SPIDR-218ENST00000522222 SUPT6HQ7KZ85 1726 aaKnown RBP10.73□□□□□ -0.69
SPIDR-218ENST00000522222 CCNB3Q8WWL7 1395 aa10.73□□□□□ -0.69
SPIDR-218ENST00000522222 ZNF518AQ6AHZ1 1483 aa10.73□□□□□ -0.69
SPIDR-218ENST00000522222 LRRC9Q6ZRR7 1453 aa10.73□□□□□ -0.69
SPIDR-218ENST00000522222 MAP3K1Q13233 1512 aa10.73□□□□□ -0.69
SPIDR-218ENST00000522222 YEATS2Q9ULM3 1422 aa10.72□□□□□ -0.69
SPIDR-218ENST00000522222 NCOA2Q15596 1464 aa10.72□□□□□ -0.69
SPIDR-218ENST00000522222 SYCP2Q9BX26 1530 aa10.72□□□□□ -0.69
SPIDR-218ENST00000522222 ARHGEF12Q9NZN5 1544 aa10.72□□□□□ -0.69
SPIDR-218ENST00000522222 KDM4FA0A1W2PPD8 638 aa10.71□□□□□ -0.69
SPIDR-218ENST00000522222 MAGI2Q86UL8 1455 aa10.71□□□□□ -0.69
SPIDR-218ENST00000522222 HECW2Q9P2P5 1572 aa10.71□□□□□ -0.69
SPIDR-218ENST00000522222 TRAPPC8Q9Y2L5 1435 aa10.7□□□□□ -0.7
SPIDR-218ENST00000522222 SIGLEC1Q9BZZ2 1709 aa10.7□□□□□ -0.7
SPIDR-218ENST00000522222 PLEKHH2Q8IVE3 1493 aa10.68□□□□□ -0.7
SPIDR-218ENST00000522222 ABCA6Q8N139 1617 aa10.68□□□□□ -0.7
SPIDR-218ENST00000522222 DIP2CQ9Y2E4 1556 aa10.68□□□□□ -0.7
SPIDR-218ENST00000522222 CFDP1Q9UEE9 299 aaPredicted RBP10.67□□□□□ -0.7
SPIDR-218ENST00000522222 BCORL1Q5H9F3 1711 aa10.67□□□□□ -0.7
SPIDR-218ENST00000522222 C9orf84Q5VXU9 1444 aa10.67□□□□□ -0.7
SPIDR-218ENST00000522222 KIAA1107Q9UPP5 1409 aa10.67□□□□□ -0.7
SPIDR-218ENST00000522222 KANK4Q5T7N3 995 aaPredicted RBP10.66□□□□□ -0.7
SPIDR-218ENST00000522222 AFAP1Q8N556 730 aa10.66□□□□□ -0.7
SPIDR-218ENST00000522222 ZNF777Q9ULD5 760 aaPredicted RBP10.66□□□□□ -0.7
SPIDR-218ENST00000522222 CAMSAP2Q08AD1 1489 aa10.66□□□□□ -0.7
SPIDR-218ENST00000522222 MLH3Q9UHC1 1453 aa10.66□□□□□ -0.7
SPIDR-218ENST00000522222 ADAMTSL3P82987 1691 aa10.66□□□□□ -0.7
SPIDR-218ENST00000522222 INO80Q9ULG1 1556 aaPredicted RBP10.65□□□□□ -0.7
SPIDR-218ENST00000522222 ATP10AO60312 1499 aa10.65□□□□□ -0.7
SPIDR-218ENST00000522222 KIDINS220Q9ULH0 1771 aa10.65□□□□□ -0.71
SPIDR-218ENST00000522222 REREQ9P2R6 1566 aa10.65□□□□□ -0.71
SPIDR-218ENST00000522222 MADDQ8WXG6 1647 aa10.64□□□□□ -0.71
SPIDR-218ENST00000522222 ATP7AQ04656 1500 aa10.63□□□□□ -0.71
SPIDR-218ENST00000522222 ZNF644Q9H582 1327 aaPredicted RBP10.63□□□□□ -0.71
SPIDR-218ENST00000522222 MBD5Q9P267 1494 aa10.63□□□□□ -0.71
SPIDR-218ENST00000522222 MYOM3Q5VTT5 1437 aa10.63□□□□□ -0.71
SPIDR-218ENST00000522222 ARID4BQ4LE39 1312 aaPredicted RBP10.62□□□□□ -0.71
SPIDR-218ENST00000522222 HNRNPMP52272 730 aaKnown RBP eCLIP10.62□□□□□ -0.716e-6■■□□□ 14.4
SPIDR-218ENST00000522222 CCDC141Q6ZP82 1450 aa10.61□□□□□ -0.71
SPIDR-218ENST00000522222 APLP2Q06481 763 aa10.61□□□□□ -0.71
SPIDR-218ENST00000522222 ARHGEF5Q12774 1597 aa10.6□□□□□ -0.71
SPIDR-218ENST00000522222 RIMS1Q86UR5 1692 aaKnown RBP10.6□□□□□ -0.71
SPIDR-218ENST00000522222 MYT1LQ9UL68 1186 aa10.6□□□□□ -0.71
SPIDR-218ENST00000522222 PLXNC1O60486 1568 aa10.6□□□□□ -0.71
SPIDR-218ENST00000522222 FER1L4A9Z1Z3 1794 aa10.6□□□□□ -0.71
SPIDR-218ENST00000522222 SPAG9O60271 1321 aaKnown RBP10.59□□□□□ -0.71
SPIDR-218ENST00000522222 AGLP35573 1532 aa10.59□□□□□ -0.71
SPIDR-218ENST00000522222 PTPRMP28827 1452 aa10.59□□□□□ -0.71
SPIDR-218ENST00000522222 MIA2Q96PC5 1412 aa10.58□□□□□ -0.72
SPIDR-218ENST00000522222 ADGBQ8N7X0 1667 aa10.57□□□□□ -0.72
SPIDR-218ENST00000522222 PTPN23Q9H3S7 1636 aa10.57□□□□□ -0.72
SPIDR-218ENST00000522222 FGD6Q6ZV73 1430 aa10.57□□□□□ -0.72
SPIDR-218ENST00000522222 A2MP01023 1474 aa10.56□□□□□ -0.72
SPIDR-218ENST00000522222 MLECQ14165 292 aa10.56□□□□□ -0.72
SPIDR-218ENST00000522222 RTEL1-TNFRSF6BF6WH68 1400 aa10.56□□□□□ -0.72
SPIDR-218ENST00000522222 CROCC2H7BZ55 1655 aa10.56□□□□□ -0.72
SPIDR-218ENST00000522222 MAST1Q9Y2H9 1570 aa10.56□□□□□ -0.72
SPIDR-218ENST00000522222 TCOF1Q13428 1488 aaKnown RBP10.55□□□□□ -0.72
SPIDR-218ENST00000522222 POTEHQ6S545 545 aa10.54□□□□□ -0.72
SPIDR-218ENST00000522222 DNMT1P26358 1616 aaKnown RBP10.53□□□□□ -0.72
SPIDR-218ENST00000522222 SHANK2Q9UPX8 1470 aa10.53□□□□□ -0.72
SPIDR-218ENST00000522222 HRCP23327 699 aa10.52□□□□□ -0.73
SPIDR-218ENST00000522222 ABCC5O15440 1437 aa10.5□□□□□ -0.73
SPIDR-218ENST00000522222 DAPK1P53355 1430 aa10.5□□□□□ -0.73
SPIDR-218ENST00000522222 RSPH4AQ5TD94 716 aa10.5□□□□□ -0.73
SPIDR-218ENST00000522222 DMRT2Q9Y5R5 561 aa10.49□□□□□ -0.73
SPIDR-218ENST00000522222 C3P01024 1663 aa10.49□□□□□ -0.73
SPIDR-218ENST00000522222 DHX29Q7Z478 1369 aaKnown RBP10.49□□□□□ -0.73
SPIDR-218ENST00000522222 CNTLNQ9NXG0 1405 aa10.49□□□□□ -0.73
SPIDR-218ENST00000522222 MROH2AA6NES4 1674 aa10.48□□□□□ -0.73
SPIDR-218ENST00000522222 LMTK3Q96Q04 1460 aa10.48□□□□□ -0.73
SPIDR-218ENST00000522222 RNF17Q9BXT8 1623 aaKnown RBP10.47□□□□□ -0.73
SPIDR-218ENST00000522222 CLTCQ00610 1675 aaKnown RBP10.47□□□□□ -0.73
SPIDR-218ENST00000522222 TSPY4P0CV99 314 aa10.47□□□□□ -0.73
SPIDR-218ENST00000522222 TSPY10P0CW01 314 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms