RNA–Protein interactions for RNA: ENST00000522214.1

SREK1-211, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-211ENST00000522214 WDR70Q9NW82 654 aa11.97□□□□□ -0.49
SREK1-211ENST00000522214 PDE4AP27815 886 aa11.96□□□□□ -0.49
SREK1-211ENST00000522214 CRISPLD2Q9H0B8 497 aa11.92□□□□□ -0.5
SREK1-211ENST00000522214 P3H3Q8IVL6 736 aa11.9□□□□□ -0.5
SREK1-211ENST00000522214 C3orf67Q6ZVT6 689 aa11.89□□□□□ -0.51
SREK1-211ENST00000522214 TMC2Q8TDI7 906 aa11.89□□□□□ -0.51
SREK1-211ENST00000522214 NCKAP5LQ9HCH0 1330 aa11.88□□□□□ -0.51
SREK1-211ENST00000522214 MFSD10Q14728 455 aa11.87□□□□□ -0.51
SREK1-211ENST00000522214 DDX27Q96GQ7 796 aaKnown RBP11.87□□□□□ -0.51
SREK1-211ENST00000522214 LARP6Q9BRS8 491 aaKnown RBP11.87□□□□□ -0.51
SREK1-211ENST00000522214 SCUBE2Q9NQ36 999 aa11.87□□□□□ -0.51
SREK1-211ENST00000522214 GPHNQ9NQX3 736 aaPredicted RBP11.87□□□□□ -0.51
SREK1-211ENST00000522214 MAMSTRQ6ZN01 415 aa11.85□□□□□ -0.51
SREK1-211ENST00000522214 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.82□□□□□ -0.52
SREK1-211ENST00000522214 E2F4Q16254 413 aa11.81□□□□□ -0.52
SREK1-211ENST00000522214 KIF3CO14782 793 aa11.8□□□□□ -0.52
SREK1-211ENST00000522214 FOXK1P85037 733 aa11.8□□□□□ -0.52
SREK1-211ENST00000522214 PPP1R15BQ5SWA1 713 aa11.8□□□□□ -0.52
SREK1-211ENST00000522214 BCANQ96GW7 911 aa11.8□□□□□ -0.52
SREK1-211ENST00000522214 C2orf72A6NCS6 295 aa11.78□□□□□ -0.52
SREK1-211ENST00000522214 SLAIN1Q8ND83 568 aa11.76□□□□□ -0.53
SREK1-211ENST00000522214 DSG2Q14126 1118 aa11.75□□□□□ -0.53
SREK1-211ENST00000522214 CAMK2BQ13554 666 aa11.74□□□□□ -0.53
SREK1-211ENST00000522214 NBR1Q14596 966 aa11.74□□□□□ -0.53
SREK1-211ENST00000522214 TMEM92Q6UXU6 159 aa11.73□□□□□ -0.53
SREK1-211ENST00000522214 KCNV2Q8TDN2 545 aa11.73□□□□□ -0.53
SREK1-211ENST00000522214 ARHGEF1Q92888 912 aaKnown RBP11.73□□□□□ -0.53
SREK1-211ENST00000522214 FAM163AQ96GL9 167 aaPredicted RBP11.73□□□□□ -0.53
SREK1-211ENST00000522214 PLPP6Q8IY26 295 aa11.72□□□□□ -0.53
SREK1-211ENST00000522214 ARIH1Q9Y4X5 557 aaPredicted RBP11.71□□□□□ -0.53
SREK1-211ENST00000522214 SLC34A2O95436 690 aa11.62□□□□□ -0.55
SREK1-211ENST00000522214 EMILIN3Q9NT22 766 aa11.6□□□□□ -0.55
SREK1-211ENST00000522214 SPDYE16A6NNV3 312 aaPredicted RBP11.59□□□□□ -0.55
SREK1-211ENST00000522214 TBC1D12O60347 775 aa11.59□□□□□ -0.55
SREK1-211ENST00000522214 POTEMA6NI47 508 aa11.57□□□□□ -0.56
SREK1-211ENST00000522214 MAP3K9P80192 1104 aa11.57□□□□□ -0.56
SREK1-211ENST00000522214 DOK7Q18PE1 504 aa11.57□□□□□ -0.56
SREK1-211ENST00000522214 LCE2DQ5TA82 110 aaPredicted RBP11.57□□□□□ -0.56
SREK1-211ENST00000522214 OXER1Q8TDS5 423 aa11.57□□□□□ -0.56
SREK1-211ENST00000522214 PTCD2Q8WV60 388 aaKnown RBP11.57□□□□□ -0.56
SREK1-211ENST00000522214 ZNF316A6NFI3 1004 aaPredicted RBP11.56□□□□□ -0.56
SREK1-211ENST00000522214 TULP1O00294 542 aaPredicted RBP11.56□□□□□ -0.56
SREK1-211ENST00000522214 DPYSL4O14531 572 aa11.56□□□□□ -0.56
SREK1-211ENST00000522214 SNPHO15079 494 aa11.56□□□□□ -0.56
SREK1-211ENST00000522214 RIMBP2O15034 1052 aa11.55□□□□□ -0.56
SREK1-211ENST00000522214 PDIA6Q15084 440 aa11.55□□□□□ -0.56
SREK1-211ENST00000522214 POTEGQ6S5H5 508 aa11.55□□□□□ -0.56
SREK1-211ENST00000522214 UPF1Q92900 1129 aaKnown RBP eCLIP11.54□□□□□ -0.56
SREK1-211ENST00000522214 SMYD5Q6GMV2 418 aa11.52□□□□□ -0.57
SREK1-211ENST00000522214 ZSWIM6Q9HCJ5 1215 aa11.52□□□□□ -0.57
SREK1-211ENST00000522214 ST18O60284 1047 aa11.51□□□□□ -0.57
SREK1-211ENST00000522214 TESPA1A2RU30 521 aaPredicted RBP11.49□□□□□ -0.57
SREK1-211ENST00000522214 SEMA3EO15041 775 aa11.48□□□□□ -0.57
SREK1-211ENST00000522214 PCDHGA4Q9Y5G9 962 aa11.48□□□□□ -0.57
SREK1-211ENST00000522214 HOXB3P14651 431 aaPredicted RBP11.47□□□□□ -0.57
SREK1-211ENST00000522214 ZNF710Q8N1W2 664 aa11.47□□□□□ -0.57
SREK1-211ENST00000522214 EVI5O60447 810 aa11.46□□□□□ -0.57
SREK1-211ENST00000522214 MARVELD3Q96A59 401 aa11.44□□□□□ -0.58
SREK1-211ENST00000522214 PTGER2P43116 358 aa11.43□□□□□ -0.58
SREK1-211ENST00000522214 ANO8Q9HCE9 1232 aaPredicted RBP11.42□□□□□ -0.58
SREK1-211ENST00000522214 GPR153Q6NV75 609 aa11.38□□□□□ -0.59
SREK1-211ENST00000522214 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.38□□□□□ -0.59
SREK1-211ENST00000522214 ARSIQ5FYB1 569 aa11.37□□□□□ -0.59
SREK1-211ENST00000522214 LMOD2Q6P5Q4 547 aa11.37□□□□□ -0.59
SREK1-211ENST00000522214 KDM4FA0A1W2PPD8 638 aa11.36□□□□□ -0.59
SREK1-211ENST00000522214 MLLT3P42568 568 aaPredicted RBP11.36□□□□□ -0.59
SREK1-211ENST00000522214 GRXCR2A6NFK2 248 aa11.35□□□□□ -0.59
SREK1-211ENST00000522214 HOXB1P14653 301 aaPredicted RBP11.35□□□□□ -0.59
SREK1-211ENST00000522214 PLSCR2Q9NRY7 297 aa11.35□□□□□ -0.59
SREK1-211ENST00000522214 PSDA5PKW4 1024 aaPredicted RBP11.34□□□□□ -0.59
SREK1-211ENST00000522214 PHF14O94880 888 aa11.34□□□□□ -0.59
SREK1-211ENST00000522214 NUDT7P0C024 238 aa11.34□□□□□ -0.59
SREK1-211ENST00000522214 EPAS1Q99814 870 aa11.34□□□□□ -0.59
SREK1-211ENST00000522214 DDX12PQ92771 950 aa11.33□□□□□ -0.6
SREK1-211ENST00000522214 EMP3P54852 163 aa11.32□□□□□ -0.6
SREK1-211ENST00000522214 JPH4Q96JJ6 628 aa11.32□□□□□ -0.6
SREK1-211ENST00000522214 FBXW7Q969H0 707 aa11.31□□□□□ -0.6
SREK1-211ENST00000522214 CDAN1Q8IWY9 1227 aa11.3□□□□□ -0.6
SREK1-211ENST00000522214 FAM205CA6NFA0 338 aa11.29□□□□□ -0.6
SREK1-211ENST00000522214 TYW1BQ6NUM6 668 aa11.29□□□□□ -0.6
SREK1-211ENST00000522214 KHSRPQ92945 711 aaKnown RBP eCLIP11.29□□□□□ -0.6
SREK1-211ENST00000522214 OSBPP22059 807 aa11.28□□□□□ -0.6
SREK1-211ENST00000522214 FOSBP53539 338 aa11.27□□□□□ -0.61
SREK1-211ENST00000522214 TPRNQ4KMQ1 711 aa11.27□□□□□ -0.61
SREK1-211ENST00000522214 GPIHBP1Q8IV16 184 aa11.26□□□□□ -0.61
SREK1-211ENST00000522214 PCDHGA10Q9Y5H3 936 aa11.26□□□□□ -0.61
SREK1-211ENST00000522214 PPP4R3BQ5MIZ7 849 aa11.25□□□□□ -0.61
SREK1-211ENST00000522214 RBM26Q5T8P6 1007 aaKnown RBP11.25□□□□□ -0.61
SREK1-211ENST00000522214 ZNF454Q8N9F8 522 aa11.25□□□□□ -0.61
SREK1-211ENST00000522214 LHX6Q9UPM6 363 aa11.25□□□□□ -0.61
SREK1-211ENST00000522214 EN1Q05925 392 aaPredicted RBP11.24□□□□□ -0.61
SREK1-211ENST00000522214 ZDHHC16Q969W1 377 aa11.24□□□□□ -0.61
SREK1-211ENST00000522214 POTEB3A0JP26 581 aa11.22□□□□□ -0.61
SREK1-211ENST00000522214 POTEBQ6S5H4 581 aa11.22□□□□□ -0.61
SREK1-211ENST00000522214 MAP3K7O43318 606 aa11.21□□□□□ -0.61
SREK1-211ENST00000522214 HS3ST6Q96QI5 342 aa11.21□□□□□ -0.61
SREK1-211ENST00000522214 NUTM2FA1L443 756 aa11.2□□□□□ -0.62
SREK1-211ENST00000522214 ZC3H15Q8WU90 426 aaKnown RBP11.2□□□□□ -0.62
SREK1-211ENST00000522214 ERBB3P21860 1342 aa11.19□□□□□ -0.62
SREK1-211ENST00000522214 PCDH10Q9P2E7 1040 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms