RNA–Protein interactions for RNA: ENST00000522039.1

HR-208, Transcript of HR, lysine demethylase and nuclear receptor corepressor, humanhuman

TSL 4

Gene HR, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HR-208ENST00000522039 LOC105371045A0A1W2PR82 267 aa27.81■■■□□ 2.04
HR-208ENST00000522039 EFCAB2Q5VUJ9 269 aa27.81■■■□□ 2.04
HR-208ENST00000522039 ARHGEF40Q8TER5 1519 aa27.81■■■□□ 2.04
HR-208ENST00000522039 CDC42BPAQ5VT25 1732 aa27.79■■■□□ 2.04
HR-208ENST00000522039 POGZQ7Z3K3 1410 aa27.77■■■□□ 2.04
HR-208ENST00000522039 SCAPERQ9BY12 1400 aa27.76■■■□□ 2.04
HR-208ENST00000522039 EHBP1L1Q8N3D4 1523 aa27.75■■■□□ 2.03
HR-208ENST00000522039 MAGI2Q86UL8 1455 aa27.75■■■□□ 2.03
HR-208ENST00000522039 MTUS2Q5JR59 1369 aa27.73■■■□□ 2.03
HR-208ENST00000522039 VPS8Q8N3P4 1428 aa27.73■■■□□ 2.03
HR-208ENST00000522039 ZFYVE16Q7Z3T8 1539 aa27.72■■■□□ 2.03
HR-208ENST00000522039 ZNF518AQ6AHZ1 1483 aa27.7■■■□□ 2.02
HR-208ENST00000522039 ABCC1P33527 1531 aa27.69■■■□□ 2.02
HR-208ENST00000522039 KDM5CP41229 1560 aa27.67■■■□□ 2.02
HR-208ENST00000522039 ITSN2Q9NZM3 1697 aa27.67■■■□□ 2.02
HR-208ENST00000522039 TIAM1Q13009 1591 aa27.66■■■□□ 2.02
HR-208ENST00000522039 GPATCH8Q9UKJ3 1502 aaKnown RBP27.65■■■□□ 2.02
HR-208ENST00000522039 BCORL1Q5H9F3 1711 aa27.63■■■□□ 2.01
HR-208ENST00000522039 ADAMTSL3P82987 1691 aa27.62■■■□□ 2.01
HR-208ENST00000522039 HECW2Q9P2P5 1572 aa27.61■■■□□ 2.01
HR-208ENST00000522039 YEATS2Q9ULM3 1422 aa27.61■■■□□ 2.01
HR-208ENST00000522039 SUPT6HQ7KZ85 1726 aaKnown RBP27.61■■■□□ 2.01
HR-208ENST00000522039 CCNB3Q8WWL7 1395 aa27.6■■■□□ 2.01
HR-208ENST00000522039 SAMD9LQ8IVG5 1584 aa27.6■■■□□ 2.01
HR-208ENST00000522039 MAP3K1Q13233 1512 aa27.58■■■□□ 2.01
HR-208ENST00000522039 PLEKHH2Q8IVE3 1493 aa27.57■■■□□ 2
HR-208ENST00000522039 ARHGEF12Q9NZN5 1544 aa27.57■■■□□ 2
HR-208ENST00000522039 ATP10AO60312 1499 aa27.54■■■□□ 2
HR-208ENST00000522039 ARID4BQ4LE39 1312 aaPredicted RBP27.54■■■□□ 2
HR-208ENST00000522039 MLH3Q9UHC1 1453 aa27.54■■■□□ 2
HR-208ENST00000522039 SIGLEC1Q9BZZ2 1709 aa27.53■■■□□ 2
HR-208ENST00000522039 SYCP2Q9BX26 1530 aa27.53■■■□□ 2
HR-208ENST00000522039 C9orf84Q5VXU9 1444 aa27.53■■■□□ 2
HR-208ENST00000522039 TRAPPC8Q9Y2L5 1435 aa27.52■■■□□ 2
HR-208ENST00000522039 CFDP1Q9UEE9 299 aaPredicted RBP27.52■■■□□ 2
HR-208ENST00000522039 AFAP1Q8N556 730 aa27.51■■□□□ 1.99
HR-208ENST00000522039 REREQ9P2R6 1566 aa27.51■■□□□ 1.99
HR-208ENST00000522039 DIP2CQ9Y2E4 1556 aa27.51■■□□□ 1.99
HR-208ENST00000522039 LRRC9Q6ZRR7 1453 aa27.51■■□□□ 1.99
HR-208ENST00000522039 KIAA1107Q9UPP5 1409 aa27.5■■□□□ 1.99
HR-208ENST00000522039 NCOA2Q15596 1464 aa27.5■■□□□ 1.99
HR-208ENST00000522039 MADDQ8WXG6 1647 aa27.49■■□□□ 1.99
HR-208ENST00000522039 ABCA6Q8N139 1617 aa27.49■■□□□ 1.99
HR-208ENST00000522039 ZNF777Q9ULD5 760 aaPredicted RBP27.48■■□□□ 1.99
HR-208ENST00000522039 KIDINS220Q9ULH0 1771 aa27.47■■□□□ 1.99
HR-208ENST00000522039 PTPRMP28827 1452 aa27.44■■□□□ 1.98
HR-208ENST00000522039 MYT1LQ9UL68 1186 aa27.43■■□□□ 1.98
HR-208ENST00000522039 RIMS1Q86UR5 1692 aaKnown RBP27.42■■□□□ 1.98
HR-208ENST00000522039 FER1L4A9Z1Z3 1794 aa27.41■■□□□ 1.98
HR-208ENST00000522039 INO80Q9ULG1 1556 aaPredicted RBP27.41■■□□□ 1.98
HR-208ENST00000522039 ATP7AQ04656 1500 aa27.38■■□□□ 1.97
HR-208ENST00000522039 AGLP35573 1532 aa27.37■■□□□ 1.97
HR-208ENST00000522039 HNRNPMP52272 730 aaKnown RBP eCLIP27.37■■□□□ 1.97
HR-208ENST00000522039 SPAG9O60271 1321 aaKnown RBP27.36■■□□□ 1.97
HR-208ENST00000522039 CAMSAP2Q08AD1 1489 aa27.35■■□□□ 1.97
HR-208ENST00000522039 MBD5Q9P267 1494 aa27.34■■□□□ 1.97
HR-208ENST00000522039 APLP2Q06481 763 aa27.34■■□□□ 1.97
HR-208ENST00000522039 ZNF644Q9H582 1327 aaPredicted RBP27.31■■□□□ 1.96
HR-208ENST00000522039 ADGBQ8N7X0 1667 aa27.3■■□□□ 1.96
HR-208ENST00000522039 KANK4Q5T7N3 995 aaPredicted RBP27.3■■□□□ 1.96
HR-208ENST00000522039 CCDC141Q6ZP82 1450 aa27.29■■□□□ 1.96
HR-208ENST00000522039 ARHGEF5Q12774 1597 aa27.28■■□□□ 1.96
HR-208ENST00000522039 MLECQ14165 292 aa27.28■■□□□ 1.96
HR-208ENST00000522039 PLXNC1O60486 1568 aa27.27■■□□□ 1.96
HR-208ENST00000522039 MYOM3Q5VTT5 1437 aa27.27■■□□□ 1.96
HR-208ENST00000522039 RTEL1-TNFRSF6BF6WH68 1400 aa27.26■■□□□ 1.95
HR-208ENST00000522039 MIA2Q96PC5 1412 aa27.26■■□□□ 1.95
HR-208ENST00000522039 RSPH4AQ5TD94 716 aa27.25■■□□□ 1.95
HR-208ENST00000522039 A2MP01023 1474 aa27.23■■□□□ 1.95
HR-208ENST00000522039 MAST1Q9Y2H9 1570 aa27.16■■□□□ 1.94
HR-208ENST00000522039 CNTLNQ9NXG0 1405 aa27.15■■□□□ 1.94
HR-208ENST00000522039 MROH2AA6NES4 1674 aa27.14■■□□□ 1.94
HR-208ENST00000522039 PTPN23Q9H3S7 1636 aa27.13■■□□□ 1.93
HR-208ENST00000522039 C3P01024 1663 aa27.12■■□□□ 1.93
HR-208ENST00000522039 LMTK3Q96Q04 1460 aa27.12■■□□□ 1.93
HR-208ENST00000522039 ESF1Q9H501 851 aaKnown RBP27.11■■□□□ 1.93
HR-208ENST00000522039 TSPY4P0CV99 314 aa27.1■■□□□ 1.93
HR-208ENST00000522039 TSPY10P0CW01 314 aa27.1■■□□□ 1.93
HR-208ENST00000522039 PREX1Q8TCU6 1659 aa27.1■■□□□ 1.93
HR-208ENST00000522039 CROCC2H7BZ55 1655 aa27.08■■□□□ 1.93
HR-208ENST00000522039 DHX29Q7Z478 1369 aaKnown RBP27.08■■□□□ 1.93
HR-208ENST00000522039 FGD6Q6ZV73 1430 aa27.07■■□□□ 1.92
HR-208ENST00000522039 PLPPR3Q6T4P5 718 aa27.06■■□□□ 1.92
HR-208ENST00000522039 TCOF1Q13428 1488 aaKnown RBP27.06■■□□□ 1.92
HR-208ENST00000522039 CLTCQ00610 1675 aaKnown RBP27.05■■□□□ 1.92
HR-208ENST00000522039 SHANK2Q9UPX8 1470 aa27.04■■□□□ 1.92
HR-208ENST00000522039 DNMT1P26358 1616 aaKnown RBP27.03■■□□□ 1.92
HR-208ENST00000522039 FAM135AQ9P2D6 1515 aa27.03■■□□□ 1.92
HR-208ENST00000522039 PPP6R1Q9UPN7 881 aa27.01■■□□□ 1.91
HR-208ENST00000522039 SETD1BQ9UPS6 1966 aaKnown RBP27■■□□□ 1.91
HR-208ENST00000522039 EIF2AK4Q9P2K8 1649 aaKnown RBP27■■□□□ 1.91
HR-208ENST00000522039 CEBPAP49715 358 aaPredicted RBP26.99■■□□□ 1.91
HR-208ENST00000522039 GGT6Q6P531 493 aa26.97■■□□□ 1.91
HR-208ENST00000522039 ABCC5O15440 1437 aa26.96■■□□□ 1.91
HR-208ENST00000522039 DAPK1P53355 1430 aa26.96■■□□□ 1.91
HR-208ENST00000522039 NPATQ14207 1427 aa26.96■■□□□ 1.91
HR-208ENST00000522039 UHRF1BP1Q6BDS2 1440 aa26.96■■□□□ 1.91
HR-208ENST00000522039 RNF17Q9BXT8 1623 aaKnown RBP26.94■■□□□ 1.9
HR-208ENST00000522039 KDM5DQ9BY66 1539 aa26.94■■□□□ 1.9
HR-208ENST00000522039 DUOX2Q9NRD8 1548 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms