RNA–Protein interactions for RNA: ENST00000521690.1

LAMA4-216, Transcript of laminin subunit alpha 4, humanhuman

TSL 4

Gene LAMA4, Length 539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-216ENST00000521690 RRBP1Q9P2E9 1410 aaKnown RBP25.14■■□□□ 1.62
LAMA4-216ENST00000521690 CFDP1Q9UEE9 299 aaPredicted RBP25.14■■□□□ 1.62
LAMA4-216ENST00000521690 ARHGAP5Q13017 1502 aa25.12■■□□□ 1.61
LAMA4-216ENST00000521690 CFAP74Q9C0B2 1584 aa25.1■■□□□ 1.61
LAMA4-216ENST00000521690 PTPN23Q9H3S7 1636 aa25.09■■□□□ 1.61
LAMA4-216ENST00000521690 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.09■■□□□ 1.61
LAMA4-216ENST00000521690 EFCAB2Q5VUJ9 269 aa25.09■■□□□ 1.61
LAMA4-216ENST00000521690 TCOF1Q13428 1488 aaKnown RBP25.09■■□□□ 1.61
LAMA4-216ENST00000521690 FANCAO15360 1455 aa25.07■■□□□ 1.6
LAMA4-216ENST00000521690 TEX14Q8IWB6 1497 aa25.05■■□□□ 1.6
LAMA4-216ENST00000521690 PLEKHH2Q8IVE3 1493 aa25.04■■□□□ 1.6
LAMA4-216ENST00000521690 NEO1Q92859 1461 aa25.04■■□□□ 1.6
LAMA4-216ENST00000521690 CAMSAP2Q08AD1 1489 aa25.03■■□□□ 1.6
LAMA4-216ENST00000521690 SAMD9LQ8IVG5 1584 aa25.03■■□□□ 1.6
LAMA4-216ENST00000521690 PPRC1Q5VV67 1664 aaKnown RBP25.02■■□□□ 1.6
LAMA4-216ENST00000521690 TRHP20396 242 aaPredicted RBP25.02■■□□□ 1.6
LAMA4-216ENST00000521690 KIAA1107Q9UPP5 1409 aa25.01■■□□□ 1.59
LAMA4-216ENST00000521690 TRIM26Q12899 539 aaPredicted RBP25■■□□□ 1.59
LAMA4-216ENST00000521690 ZNF777Q9ULD5 760 aaPredicted RBP25■■□□□ 1.59
LAMA4-216ENST00000521690 TSPOAP1O95153 1857 aa24.98■■□□□ 1.59
LAMA4-216ENST00000521690 AKNAQ7Z591 1439 aa24.98■■□□□ 1.59
LAMA4-216ENST00000521690 FAM50AQ14320 339 aaKnown RBP24.98■■□□□ 1.59
LAMA4-216ENST00000521690 ABCC1P33527 1531 aa24.97■■□□□ 1.59
LAMA4-216ENST00000521690 ZNF644Q9H582 1327 aaPredicted RBP24.97■■□□□ 1.59
LAMA4-216ENST00000521690 ADGRL1O94910 1474 aa24.95■■□□□ 1.58
LAMA4-216ENST00000521690 ARHGEF5Q12774 1597 aa24.94■■□□□ 1.58
LAMA4-216ENST00000521690 RSPH4AQ5TD94 716 aa24.94■■□□□ 1.58
LAMA4-216ENST00000521690 SYCP2Q9BX26 1530 aa24.92■■□□□ 1.58
LAMA4-216ENST00000521690 MBD5Q9P267 1494 aa24.92■■□□□ 1.58
LAMA4-216ENST00000521690 DNMT1P26358 1616 aaKnown RBP24.92■■□□□ 1.58
LAMA4-216ENST00000521690 SCAPERQ9BY12 1400 aa24.89■■□□□ 1.58
LAMA4-216ENST00000521690 ARHGEF12Q9NZN5 1544 aa24.89■■□□□ 1.57
LAMA4-216ENST00000521690 CCDC141Q6ZP82 1450 aa24.88■■□□□ 1.57
LAMA4-216ENST00000521690 DAPK1P53355 1430 aa24.87■■□□□ 1.57
LAMA4-216ENST00000521690 HNRNPMP52272 730 aaKnown RBP eCLIP24.87■■□□□ 1.57
LAMA4-216ENST00000521690 ABCC5O15440 1437 aa24.86■■□□□ 1.57
LAMA4-216ENST00000521690 CROCC2H7BZ55 1655 aa24.85■■□□□ 1.57
LAMA4-216ENST00000521690 DENND4BO75064 1496 aaPredicted RBP24.84■■□□□ 1.57
LAMA4-216ENST00000521690 SHANK2Q9UPX8 1470 aa24.84■■□□□ 1.57
LAMA4-216ENST00000521690 ZNF518AQ6AHZ1 1483 aa24.83■■□□□ 1.57
LAMA4-216ENST00000521690 POGZQ7Z3K3 1410 aa24.83■■□□□ 1.57
LAMA4-216ENST00000521690 TRAPPC8Q9Y2L5 1435 aa24.82■■□□□ 1.56
LAMA4-216ENST00000521690 TSPY4P0CV99 314 aa24.8■■□□□ 1.56
LAMA4-216ENST00000521690 TSPY10P0CW01 314 aa24.8■■□□□ 1.56
LAMA4-216ENST00000521690 MAST1Q9Y2H9 1570 aa24.8■■□□□ 1.56
LAMA4-216ENST00000521690 RICTORQ6R327 1708 aa24.79■■□□□ 1.56
LAMA4-216ENST00000521690 KDM5CP41229 1560 aa24.79■■□□□ 1.56
LAMA4-216ENST00000521690 ITGAEP38570 1179 aa24.78■■□□□ 1.56
LAMA4-216ENST00000521690 PTPRKQ15262 1439 aa24.77■■□□□ 1.56
LAMA4-216ENST00000521690 C9orf84Q5VXU9 1444 aa24.77■■□□□ 1.56
LAMA4-216ENST00000521690 AFAP1Q8N556 730 aa24.76■■□□□ 1.55
LAMA4-216ENST00000521690 RTEL1-TNFRSF6BF6WH68 1400 aa24.76■■□□□ 1.55
LAMA4-216ENST00000521690 ADGBQ8N7X0 1667 aa24.75■■□□□ 1.55
LAMA4-216ENST00000521690 ROCK1Q13464 1354 aa24.75■■□□□ 1.55
LAMA4-216ENST00000521690 ADGRL2O95490 1459 aa24.74■■□□□ 1.55
LAMA4-216ENST00000521690 FRMPD1Q5SYB0 1578 aa24.74■■□□□ 1.55
LAMA4-216ENST00000521690 ZMYM4Q5VZL5 1548 aa24.73■■□□□ 1.55
LAMA4-216ENST00000521690 SPAG9O60271 1321 aaKnown RBP24.73■■□□□ 1.55
LAMA4-216ENST00000521690 INO80Q9ULG1 1556 aaPredicted RBP24.72■■□□□ 1.55
LAMA4-216ENST00000521690 MLH3Q9UHC1 1453 aa24.72■■□□□ 1.55
LAMA4-216ENST00000521690 HECW2Q9P2P5 1572 aa24.71■■□□□ 1.55
LAMA4-216ENST00000521690 COL17A1Q9UMD9 1497 aaPredicted RBP24.71■■□□□ 1.55
LAMA4-216ENST00000521690 RAPGEF3O95398 923 aa24.71■■□□□ 1.55
LAMA4-216ENST00000521690 ZFYVE16Q7Z3T8 1539 aa24.71■■□□□ 1.55
LAMA4-216ENST00000521690 ANKRD30AQ9BXX3 1397 aa24.7■■□□□ 1.55
LAMA4-216ENST00000521690 PCGF6Q9BYE7 350 aa24.7■■□□□ 1.54
LAMA4-216ENST00000521690 KDM6BO15054 1643 aa24.7■■□□□ 1.54
LAMA4-216ENST00000521690 PLXNC1O60486 1568 aa24.7■■□□□ 1.54
LAMA4-216ENST00000521690 ATP7AQ04656 1500 aa24.7■■□□□ 1.54
LAMA4-216ENST00000521690 MAGI2Q86UL8 1455 aa24.69■■□□□ 1.54
LAMA4-216ENST00000521690 NCOA1Q15788 1441 aa24.69■■□□□ 1.54
LAMA4-216ENST00000521690 CHIC2Q9UKJ5 165 aa24.67■■□□□ 1.54
LAMA4-216ENST00000521690 KIDINS220Q9ULH0 1771 aa24.66■■□□□ 1.54
LAMA4-216ENST00000521690 HFM1A2PYH4 1435 aa24.65■■□□□ 1.54
LAMA4-216ENST00000521690 GCC2Q8IWJ2 1684 aa24.62■■□□□ 1.53
LAMA4-216ENST00000521690 NAIPQ13075 1403 aa24.61■■□□□ 1.53
LAMA4-216ENST00000521690 KIF15Q9NS87 1388 aa24.6■■□□□ 1.53
LAMA4-216ENST00000521690 MYT1LQ9UL68 1186 aa24.6■■□□□ 1.53
LAMA4-216ENST00000521690 DUOX2Q9NRD8 1548 aa24.59■■□□□ 1.53
LAMA4-216ENST00000521690 RRP7BPQ9NSQ0 103 aa24.58■■□□□ 1.53
LAMA4-216ENST00000521690 SETD5Q9C0A6 1442 aa24.57■■□□□ 1.52
LAMA4-216ENST00000521690 ABCA6Q8N139 1617 aa24.57■■□□□ 1.52
LAMA4-216ENST00000521690 DIP2CQ9Y2E4 1556 aa24.56■■□□□ 1.52
LAMA4-216ENST00000521690 ARHGEF40Q8TER5 1519 aa24.55■■□□□ 1.52
LAMA4-216ENST00000521690 YEATS2Q9ULM3 1422 aa24.54■■□□□ 1.52
LAMA4-216ENST00000521690 ERBINQ96RT1 1412 aa24.53■■□□□ 1.52
LAMA4-216ENST00000521690 ANKRD50Q9ULJ7 1429 aa24.52■■□□□ 1.52
LAMA4-216ENST00000521690 A2MP01023 1474 aa24.52■■□□□ 1.52
LAMA4-216ENST00000521690 REREQ9P2R6 1566 aa24.52■■□□□ 1.52
LAMA4-216ENST00000521690 ACIN1Q9UKV3 1341 aaKnown RBP24.52■■□□□ 1.52
LAMA4-216ENST00000521690 DHX29Q7Z478 1369 aaKnown RBP24.52■■□□□ 1.52
LAMA4-216ENST00000521690 ATP10AO60312 1499 aa24.51■■□□□ 1.51
LAMA4-216ENST00000521690 HRCP23327 699 aa24.51■■□□□ 1.51
LAMA4-216ENST00000521690 EIF2AK4Q9P2K8 1649 aaKnown RBP24.5■■□□□ 1.51
LAMA4-216ENST00000521690 RAB3GAP2Q9H2M9 1393 aa24.47■■□□□ 1.51
LAMA4-216ENST00000521690 BCORL1Q5H9F3 1711 aa24.45■■□□□ 1.5
LAMA4-216ENST00000521690 AGLP35573 1532 aa24.42■■□□□ 1.5
LAMA4-216ENST00000521690 UNC13BO14795 1591 aa24.38■■□□□ 1.49
LAMA4-216ENST00000521690 DEPDC5O75140 1603 aa24.38■■□□□ 1.49
LAMA4-216ENST00000521690 RNF17Q9BXT8 1623 aaKnown RBP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms