RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 ARHGAP5Q13017 1502 aa33.73■■■□□ 2.99
PTP4A3-204ENST00000521578 PHLDB1Q86UU1 1377 aa33.73■■■□□ 2.99
PTP4A3-204ENST00000521578 CFDP1Q9UEE9 299 aaPredicted RBP33.71■■■□□ 2.99
PTP4A3-204ENST00000521578 TEX14Q8IWB6 1497 aa33.71■■■□□ 2.99
PTP4A3-204ENST00000521578 ITSN2Q9NZM3 1697 aa33.7■■■□□ 2.99
PTP4A3-204ENST00000521578 FANCAO15360 1455 aa33.7■■■□□ 2.98
PTP4A3-204ENST00000521578 EFCAB2Q5VUJ9 269 aa33.69■■■□□ 2.98
PTP4A3-204ENST00000521578 ARAP3Q8WWN8 1544 aa33.69■■■□□ 2.98
PTP4A3-204ENST00000521578 MYOM3Q5VTT5 1437 aa33.67■■■□□ 2.98
PTP4A3-204ENST00000521578 ZNF777Q9ULD5 760 aaPredicted RBP33.67■■■□□ 2.98
PTP4A3-204ENST00000521578 NEO1Q92859 1461 aa33.61■■■□□ 2.97
PTP4A3-204ENST00000521578 CFAP74Q9C0B2 1584 aa33.6■■■□□ 2.97
PTP4A3-204ENST00000521578 AKNAQ7Z591 1439 aa33.6■■■□□ 2.97
PTP4A3-204ENST00000521578 ZNF644Q9H582 1327 aaPredicted RBP33.58■■■□□ 2.97
PTP4A3-204ENST00000521578 FGD6Q6ZV73 1430 aa33.56■■■□□ 2.96
PTP4A3-204ENST00000521578 MIA2Q96PC5 1412 aa33.56■■■□□ 2.96
PTP4A3-204ENST00000521578 SAMD9LQ8IVG5 1584 aa33.56■■■□□ 2.96
PTP4A3-204ENST00000521578 ADGRL1O94910 1474 aa33.54■■■□□ 2.96
PTP4A3-204ENST00000521578 CAMSAP2Q08AD1 1489 aa33.5■■■□□ 2.95
PTP4A3-204ENST00000521578 SCAPERQ9BY12 1400 aa33.5■■■□□ 2.95
PTP4A3-204ENST00000521578 PTPN23Q9H3S7 1636 aa33.49■■■□□ 2.95
PTP4A3-204ENST00000521578 ABCC1P33527 1531 aa33.48■■■□□ 2.95
PTP4A3-204ENST00000521578 HNRNPMP52272 730 aaKnown RBP eCLIP33.47■■■□□ 2.954e-8■■■■■ 28.3
PTP4A3-204ENST00000521578 COL17A1Q9UMD9 1497 aaPredicted RBP33.47■■■□□ 2.95
PTP4A3-204ENST00000521578 ARHGEF12Q9NZN5 1544 aa33.46■■■□□ 2.95
PTP4A3-204ENST00000521578 SYCP2Q9BX26 1530 aa33.45■■■□□ 2.95
PTP4A3-204ENST00000521578 PLEKHH2Q8IVE3 1493 aa33.44■■■□□ 2.94
PTP4A3-204ENST00000521578 ZEB1P37275 1124 aaPredicted RBP33.44■■■□□ 2.94
PTP4A3-204ENST00000521578 FAM50AQ14320 339 aaKnown RBP33.44■■■□□ 2.94
PTP4A3-204ENST00000521578 RAPGEF3O95398 923 aa33.43■■■□□ 2.94
PTP4A3-204ENST00000521578 KDM6BO15054 1643 aa33.43■■■□□ 2.94
PTP4A3-204ENST00000521578 DENND4BO75064 1496 aaPredicted RBP33.42■■■□□ 2.94
PTP4A3-204ENST00000521578 KIAA1107Q9UPP5 1409 aa33.42■■■□□ 2.94
PTP4A3-204ENST00000521578 TCOF1Q13428 1488 aaKnown RBP33.41■■■□□ 2.94
PTP4A3-204ENST00000521578 TRAPPC8Q9Y2L5 1435 aa33.38■■■□□ 2.93
PTP4A3-204ENST00000521578 AFAP1Q8N556 730 aa33.37■■■□□ 2.93
PTP4A3-204ENST00000521578 RRBP1Q9P2E9 1410 aaKnown RBP33.37■■■□□ 2.93
PTP4A3-204ENST00000521578 POGZQ7Z3K3 1410 aa33.36■■■□□ 2.93
PTP4A3-204ENST00000521578 MBD5Q9P267 1494 aa33.36■■■□□ 2.93
PTP4A3-204ENST00000521578 RICTORQ6R327 1708 aa33.34■■■□□ 2.93
PTP4A3-204ENST00000521578 FRMPD1Q5SYB0 1578 aa33.32■■■□□ 2.92
PTP4A3-204ENST00000521578 ZNF518AQ6AHZ1 1483 aa33.32■■■□□ 2.92
PTP4A3-204ENST00000521578 ARHGEF5Q12774 1597 aa33.29■■■□□ 2.92
PTP4A3-204ENST00000521578 CCDC141Q6ZP82 1450 aa33.27■■■□□ 2.92
PTP4A3-204ENST00000521578 RSPH4AQ5TD94 716 aa33.27■■■□□ 2.92
PTP4A3-204ENST00000521578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.25■■■□□ 2.916e-7■■■■□ 20.4
PTP4A3-204ENST00000521578 ITGAEP38570 1179 aa33.24■■■□□ 2.91
PTP4A3-204ENST00000521578 MYT1LQ9UL68 1186 aa33.24■■■□□ 2.91
PTP4A3-204ENST00000521578 KDM5CP41229 1560 aa33.24■■■□□ 2.91
PTP4A3-204ENST00000521578 ABCC5O15440 1437 aa33.23■■■□□ 2.91
PTP4A3-204ENST00000521578 DNMT1P26358 1616 aaKnown RBP33.23■■■□□ 2.91
PTP4A3-204ENST00000521578 DAPK1P53355 1430 aa33.23■■■□□ 2.91
PTP4A3-204ENST00000521578 SPAG9O60271 1321 aaKnown RBP33.21■■■□□ 2.91
PTP4A3-204ENST00000521578 TSPY4P0CV99 314 aa33.21■■■□□ 2.91
PTP4A3-204ENST00000521578 TSPY10P0CW01 314 aa33.21■■■□□ 2.91
PTP4A3-204ENST00000521578 ZMYM4Q5VZL5 1548 aa33.19■■■□□ 2.9
PTP4A3-204ENST00000521578 HECW2Q9P2P5 1572 aa33.16■■■□□ 2.9
PTP4A3-204ENST00000521578 CROCC2H7BZ55 1655 aa33.16■■■□□ 2.9
PTP4A3-204ENST00000521578 CHIC2Q9UKJ5 165 aa33.15■■■□□ 2.9
PTP4A3-204ENST00000521578 MLH3Q9UHC1 1453 aa33.14■■■□□ 2.9
PTP4A3-204ENST00000521578 C9orf84Q5VXU9 1444 aa33.14■■■□□ 2.9
PTP4A3-204ENST00000521578 PTPRKQ15262 1439 aa33.13■■■□□ 2.89
PTP4A3-204ENST00000521578 YEATS2Q9ULM3 1422 aa33.12■■■□□ 2.89
PTP4A3-204ENST00000521578 KIDINS220Q9ULH0 1771 aa33.12■■■□□ 2.89
PTP4A3-204ENST00000521578 ATP7AQ04656 1500 aa33.12■■■□□ 2.89
PTP4A3-204ENST00000521578 ZFYVE16Q7Z3T8 1539 aa33.12■■■□□ 2.89
PTP4A3-204ENST00000521578 INO80Q9ULG1 1556 aaPredicted RBP33.11■■■□□ 2.89
PTP4A3-204ENST00000521578 MAGI2Q86UL8 1455 aa33.11■■■□□ 2.89
PTP4A3-204ENST00000521578 SHANK2Q9UPX8 1470 aa33.1■■■□□ 2.89
PTP4A3-204ENST00000521578 RTEL1-TNFRSF6BF6WH68 1400 aa33.08■■■□□ 2.89
PTP4A3-204ENST00000521578 MAST1Q9Y2H9 1570 aa33.08■■■□□ 2.89
PTP4A3-204ENST00000521578 ABCA6Q8N139 1617 aa33.04■■■□□ 2.88
PTP4A3-204ENST00000521578 ARHGEF40Q8TER5 1519 aa33.03■■■□□ 2.88
PTP4A3-204ENST00000521578 DIP2CQ9Y2E4 1556 aa33.01■■■□□ 2.87
PTP4A3-204ENST00000521578 RRP7BPQ9NSQ0 103 aa32.99■■■□□ 2.87
PTP4A3-204ENST00000521578 ANKRD30AQ9BXX3 1397 aa32.99■■■□□ 2.87
PTP4A3-204ENST00000521578 ADGBQ8N7X0 1667 aa32.99■■■□□ 2.87
PTP4A3-204ENST00000521578 NCOA1Q15788 1441 aa32.97■■■□□ 2.87
PTP4A3-204ENST00000521578 ATP10AO60312 1499 aa32.97■■■□□ 2.87
PTP4A3-204ENST00000521578 ADGRL2O95490 1459 aa32.97■■■□□ 2.87
PTP4A3-204ENST00000521578 PLXNC1O60486 1568 aa32.96■■■□□ 2.87
PTP4A3-204ENST00000521578 KIF15Q9NS87 1388 aa32.94■■■□□ 2.86
PTP4A3-204ENST00000521578 ROCK1Q13464 1354 aa32.93■■■□□ 2.86
PTP4A3-204ENST00000521578 CCER1Q8TC90 406 aaPredicted RBP32.92■■■□□ 2.86
PTP4A3-204ENST00000521578 A2MP01023 1474 aa32.9■■■□□ 2.86
PTP4A3-204ENST00000521578 DHX29Q7Z478 1369 aaKnown RBP32.87■■■□□ 2.85
PTP4A3-204ENST00000521578 SIGLEC1Q9BZZ2 1709 aa32.86■■■□□ 2.85
PTP4A3-204ENST00000521578 DUOX2Q9NRD8 1548 aa32.85■■■□□ 2.85
PTP4A3-204ENST00000521578 ARID4BQ4LE39 1312 aaPredicted RBP32.85■■■□□ 2.85
PTP4A3-204ENST00000521578 REREQ9P2R6 1566 aa32.84■■■□□ 2.85
PTP4A3-204ENST00000521578 NAIPQ13075 1403 aa32.79■■■□□ 2.84
PTP4A3-204ENST00000521578 HFM1A2PYH4 1435 aa32.78■■■□□ 2.84
PTP4A3-204ENST00000521578 ANKRD50Q9ULJ7 1429 aa32.78■■■□□ 2.84
PTP4A3-204ENST00000521578 KIF3BO15066 747 aa32.77■■■□□ 2.84
PTP4A3-204ENST00000521578 ERBINQ96RT1 1412 aa32.76■■■□□ 2.84
PTP4A3-204ENST00000521578 MLECQ14165 292 aa32.74■■■□□ 2.83
PTP4A3-204ENST00000521578 AGLP35573 1532 aa32.74■■■□□ 2.83
PTP4A3-204ENST00000521578 GCC2Q8IWJ2 1684 aa32.73■■■□□ 2.83
PTP4A3-204ENST00000521578 EIF2AK4Q9P2K8 1649 aaKnown RBP32.7■■■□□ 2.82
PTP4A3-204ENST00000521578 GGT6Q6P531 493 aa32.69■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms