RNA–Protein interactions for RNA: ENST00000521553.5

RUNX1T1-234, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1T1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-234ENST00000521553 GPR153Q6NV75 609 aa12.95□□□□□ -0.34
RUNX1T1-234ENST00000521553 TMEM92Q6UXU6 159 aa12.92□□□□□ -0.34
RUNX1T1-234ENST00000521553 RB1CC1Q8TDY2 1594 aa12.92□□□□□ -0.34
RUNX1T1-234ENST00000521553 DCAF8L2P0C7V8 631 aa12.89□□□□□ -0.35
RUNX1T1-234ENST00000521553 NACADO15069 1562 aa12.87□□□□□ -0.35
RUNX1T1-234ENST00000521553 ARSIQ5FYB1 569 aa12.87□□□□□ -0.35
RUNX1T1-234ENST00000521553 LSM11P83369 360 aaKnown RBP eCLIP12.86□□□□□ -0.35
RUNX1T1-234ENST00000521553 ZNF316A6NFI3 1004 aaPredicted RBP12.85□□□□□ -0.35
RUNX1T1-234ENST00000521553 ZCCHC6Q5VYS8 1495 aaKnown RBP12.84□□□□□ -0.35
RUNX1T1-234ENST00000521553 RIOK3O14730 519 aaKnown RBP12.83□□□□□ -0.36
RUNX1T1-234ENST00000521553 SOX12O15370 315 aa12.82□□□□□ -0.36
RUNX1T1-234ENST00000521553 PLA2G2EQ9NZK7 142 aa12.81□□□□□ -0.36
RUNX1T1-234ENST00000521553 RNF25Q96BH1 459 aaPredicted RBP12.79□□□□□ -0.36
RUNX1T1-234ENST00000521553 VGFO15240 615 aaPredicted RBP12.78□□□□□ -0.36
RUNX1T1-234ENST00000521553 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.77□□□□□ -0.37
RUNX1T1-234ENST00000521553 PBX2P40425 430 aa12.77□□□□□ -0.37
RUNX1T1-234ENST00000521553 ZFP91Q96JP5 570 aaPredicted RBP12.77□□□□□ -0.37
RUNX1T1-234ENST00000521553 KHSRPQ92945 711 aaKnown RBP eCLIP12.76□□□□□ -0.37
RUNX1T1-234ENST00000521553 MS4A4AQ96JQ5 239 aa12.75□□□□□ -0.37
RUNX1T1-234ENST00000521553 HCSTQ9UBK5 93 aa12.75□□□□□ -0.37
RUNX1T1-234ENST00000521553 MYO15BQ96JP2 1530 aa12.74□□□□□ -0.37
RUNX1T1-234ENST00000521553 PHF8Q9UPP1 1060 aa12.73□□□□□ -0.37
RUNX1T1-234ENST00000521553 DCAF1Q9Y4B6 1507 aa12.71□□□□□ -0.37
RUNX1T1-234ENST00000521553 UNC13AQ9UPW8 1703 aa12.68□□□□□ -0.38
RUNX1T1-234ENST00000521553 TAOK2Q9UL54 1235 aa12.67□□□□□ -0.38
RUNX1T1-234ENST00000521553 NUDT7P0C024 238 aa12.65□□□□□ -0.38
RUNX1T1-234ENST00000521553 AXIN2Q9Y2T1 843 aa12.63□□□□□ -0.39
RUNX1T1-234ENST00000521553 NLRP6P59044 892 aa12.62□□□□□ -0.39
RUNX1T1-234ENST00000521553 BCL11BQ9C0K0 894 aaPredicted RBP12.62□□□□□ -0.39
RUNX1T1-234ENST00000521553 LHX6Q9UPM6 363 aa12.61□□□□□ -0.39
RUNX1T1-234ENST00000521553 POTEEQ6S8J3 1075 aa12.59□□□□□ -0.39
RUNX1T1-234ENST00000521553 STK24Q9Y6E0 443 aa12.59□□□□□ -0.39
RUNX1T1-234ENST00000521553 SCRIBQ14160 1630 aa12.58□□□□□ -0.4
RUNX1T1-234ENST00000521553 ADGRD1Q6QNK2 874 aa12.58□□□□□ -0.4
RUNX1T1-234ENST00000521553 ECM2O94769 699 aaPredicted RBP12.57□□□□□ -0.4
RUNX1T1-234ENST00000521553 FBXO22Q8NEZ5 403 aa12.55□□□□□ -0.4
RUNX1T1-234ENST00000521553 PCDHGA4Q9Y5G9 962 aa12.55□□□□□ -0.4
RUNX1T1-234ENST00000521553 C2orf72A6NCS6 295 aa12.54□□□□□ -0.4
RUNX1T1-234ENST00000521553 STK25O00506 426 aa12.54□□□□□ -0.4
RUNX1T1-234ENST00000521553 ARHGAP33O14559 1287 aa12.54□□□□□ -0.4
RUNX1T1-234ENST00000521553 KIF3CO14782 793 aa12.53□□□□□ -0.4
RUNX1T1-234ENST00000521553 PSDA5PKW4 1024 aaPredicted RBP12.52□□□□□ -0.41
RUNX1T1-234ENST00000521553 SLC34A2O95436 690 aa12.52□□□□□ -0.41
RUNX1T1-234ENST00000521553 MFRPQ9BY79 579 aa12.51□□□□□ -0.41
RUNX1T1-234ENST00000521553 TK2O00142 265 aa12.48□□□□□ -0.41
RUNX1T1-234ENST00000521553 BICRAQ9NZM4 1560 aa12.48□□□□□ -0.41
RUNX1T1-234ENST00000521553 STAC3Q96MF2 364 aa12.46□□□□□ -0.41
RUNX1T1-234ENST00000521553 PKD2Q13563 968 aa12.45□□□□□ -0.42
RUNX1T1-234ENST00000521553 TMC2Q8TDI7 906 aa12.45□□□□□ -0.42
RUNX1T1-234ENST00000521553 KCTD12Q96CX2 325 aaKnown RBP12.45□□□□□ -0.42
RUNX1T1-234ENST00000521553 RGL2O15211 777 aa12.43□□□□□ -0.42
RUNX1T1-234ENST00000521553 HRO43593 1189 aa12.41□□□□□ -0.42
RUNX1T1-234ENST00000521553 RGS20O76081 388 aa12.39□□□□□ -0.43
RUNX1T1-234ENST00000521553 DMRTA1Q5VZB9 504 aa12.38□□□□□ -0.43
RUNX1T1-234ENST00000521553 PSEN2P49810 448 aa12.37□□□□□ -0.43
RUNX1T1-234ENST00000521553 IRX2Q9BZI1 471 aaPredicted RBP12.37□□□□□ -0.43
RUNX1T1-234ENST00000521553 PPP4R3BQ5MIZ7 849 aa12.35□□□□□ -0.43
RUNX1T1-234ENST00000521553 KCNH8Q96L42 1107 aa12.35□□□□□ -0.43
RUNX1T1-234ENST00000521553 SHROOM4Q9ULL8 1493 aa12.34□□□□□ -0.43
RUNX1T1-234ENST00000521553 PTPN5P54829 565 aa12.31□□□□□ -0.44
RUNX1T1-234ENST00000521553 PPP1R37O75864 691 aa12.28□□□□□ -0.44
RUNX1T1-234ENST00000521553 IFFO2Q5TF58 517 aa12.28□□□□□ -0.44
RUNX1T1-234ENST00000521553 PTCD2Q8WV60 388 aaKnown RBP12.28□□□□□ -0.44
RUNX1T1-234ENST00000521553 KDM4FA0A1W2PPD8 638 aa12.27□□□□□ -0.45
RUNX1T1-234ENST00000521553 KCNK17Q96T54 332 aa12.26□□□□□ -0.45
RUNX1T1-234ENST00000521553 A0A0G2JS52 829 aa12.23□□□□□ -0.45
RUNX1T1-234ENST00000521553 TBC1D12O60347 775 aa12.22□□□□□ -0.45
RUNX1T1-234ENST00000521553 VPS9D1Q9Y2B5 631 aa12.2□□□□□ -0.46
RUNX1T1-234ENST00000521553 HS6ST3Q8IZP7 471 aa12.18□□□□□ -0.46
RUNX1T1-234ENST00000521553 EIF4G1Q04637 1599 aaKnown RBP12.18□□□□□ -0.46
RUNX1T1-234ENST00000521553 GOLGA8CPA6NN73 597 aa12.17□□□□□ -0.46
RUNX1T1-234ENST00000521553 THSD4Q6ZMP0 1018 aa12.16□□□□□ -0.46
RUNX1T1-234ENST00000521553 PLPP6Q8IY26 295 aa12.16□□□□□ -0.46
RUNX1T1-234ENST00000521553 FOXK1P85037 733 aa12.15□□□□□ -0.46
RUNX1T1-234ENST00000521553 GPHNQ9NQX3 736 aaPredicted RBP12.13□□□□□ -0.47
RUNX1T1-234ENST00000521553 CC2D2AQ9P2K1 1620 aa12.13□□□□□ -0.47
RUNX1T1-234ENST00000521553 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
RUNX1T1-234ENST00000521553 SLC4A5Q9BY07 1137 aa12.12□□□□□ -0.47
RUNX1T1-234ENST00000521553 WNT2BQ93097 391 aa12.11□□□□□ -0.47
RUNX1T1-234ENST00000521553 MRPL50Q8N5N7 158 aaKnown RBP12.09□□□□□ -0.47
RUNX1T1-234ENST00000521553 ZNF454Q8N9F8 522 aa12.09□□□□□ -0.47
RUNX1T1-234ENST00000521553 DSG2Q14126 1118 aa12.08□□□□□ -0.48
RUNX1T1-234ENST00000521553 Q6ZNB5 142 aa12.08□□□□□ -0.48
RUNX1T1-234ENST00000521553 BCL2L12Q9HB09 334 aa12.07□□□□□ -0.48
RUNX1T1-234ENST00000521553 BHMG1C9JSJ3 638 aaPredicted RBP12.05□□□□□ -0.48
RUNX1T1-234ENST00000521553 PTPREP23469 700 aa12.05□□□□□ -0.48
RUNX1T1-234ENST00000521553 NBPF3Q9H094 633 aa12.03□□□□□ -0.48
RUNX1T1-234ENST00000521553 DNAJC5Q9H3Z4 198 aa12.03□□□□□ -0.48
RUNX1T1-234ENST00000521553 RYDENQ9NUL5 291 aaKnown RBP12.03□□□□□ -0.48
RUNX1T1-234ENST00000521553 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.49
RUNX1T1-234ENST00000521553 NKX1-1Q15270 411 aaPredicted RBP12.02□□□□□ -0.49
RUNX1T1-234ENST00000521553 ZBED2Q9BTP6 218 aa12□□□□□ -0.49
RUNX1T1-234ENST00000521553 SMARCA4P51532 1647 aa12□□□□□ -0.49
RUNX1T1-234ENST00000521553 OXER1Q8TDS5 423 aa11.98□□□□□ -0.49
RUNX1T1-234ENST00000521553 UPF1Q92900 1129 aaKnown RBP eCLIP11.98□□□□□ -0.49
RUNX1T1-234ENST00000521553 BAZ1AQ9NRL2 1556 aaPredicted RBP11.97□□□□□ -0.49
RUNX1T1-234ENST00000521553 FOSBP53539 338 aa11.95□□□□□ -0.5
RUNX1T1-234ENST00000521553 ITGBL1O95965 494 aaPredicted RBP11.94□□□□□ -0.5
RUNX1T1-234ENST00000521553 ANKK1Q8NFD2 765 aa11.93□□□□□ -0.5
RUNX1T1-234ENST00000521553 CRISPLD2Q9H0B8 497 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms