RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CDAN1Q8IWY9 1227 aa7.92□□□□□ -1.14
HMGN1P28-201ENST00000521340 TMEM121BQ9BXQ6 578 aaPredicted RBP7.9□□□□□ -1.14
HMGN1P28-201ENST00000521340 STK25O00506 426 aa7.88□□□□□ -1.15
HMGN1P28-201ENST00000521340 TPRNQ4KMQ1 711 aa7.88□□□□□ -1.15
HMGN1P28-201ENST00000521340 MARVELD3Q96A59 401 aa7.88□□□□□ -1.15
HMGN1P28-201ENST00000521340 MS4A4AQ96JQ5 239 aa7.88□□□□□ -1.15
HMGN1P28-201ENST00000521340 BCL11BQ9C0K0 894 aaPredicted RBP7.87□□□□□ -1.15
HMGN1P28-201ENST00000521340 SOX12O15370 315 aa7.86□□□□□ -1.15
HMGN1P28-201ENST00000521340 PHF8Q9UPP1 1060 aa7.86□□□□□ -1.15
HMGN1P28-201ENST00000521340 G3V3G9 751 aa7.85□□□□□ -1.15
HMGN1P28-201ENST00000521340 HOXB3P14651 431 aaPredicted RBP7.85□□□□□ -1.15
HMGN1P28-201ENST00000521340 TMEM92Q6UXU6 159 aa7.84□□□□□ -1.15
HMGN1P28-201ENST00000521340 POTEB3A0JP26 581 aa7.83□□□□□ -1.16
HMGN1P28-201ENST00000521340 POTEBQ6S5H4 581 aa7.83□□□□□ -1.16
HMGN1P28-201ENST00000521340 MICALL2Q8IY33 904 aa7.83□□□□□ -1.16
HMGN1P28-201ENST00000521340 STK24Q9Y6E0 443 aa7.82□□□□□ -1.16
HMGN1P28-201ENST00000521340 EMP3P54852 163 aa7.8□□□□□ -1.16
HMGN1P28-201ENST00000521340 FBXO22Q8NEZ5 403 aa7.8□□□□□ -1.16
HMGN1P28-201ENST00000521340 CADPS2Q86UW7 1296 aa7.78□□□□□ -1.16
HMGN1P28-201ENST00000521340 MFRPQ9BY79 579 aa7.78□□□□□ -1.16
HMGN1P28-201ENST00000521340 FAM205CA6NFA0 338 aa7.77□□□□□ -1.17
HMGN1P28-201ENST00000521340 NLRP6P59044 892 aa7.77□□□□□ -1.17
HMGN1P28-201ENST00000521340 HS3ST6Q96QI5 342 aa7.77□□□□□ -1.17
HMGN1P28-201ENST00000521340 HOXB1P14653 301 aaPredicted RBP7.75□□□□□ -1.17
HMGN1P28-201ENST00000521340 SPNS2Q8IVW8 549 aa7.74□□□□□ -1.17
HMGN1P28-201ENST00000521340 RYDENQ9NUL5 291 aaKnown RBP7.74□□□□□ -1.17
HMGN1P28-201ENST00000521340 DOK7Q18PE1 504 aa7.73□□□□□ -1.17
HMGN1P28-201ENST00000521340 ZNF710Q8N1W2 664 aa7.73□□□□□ -1.17
HMGN1P28-201ENST00000521340 KRTAP3-3Q9BYR6 98 aa7.73□□□□□ -1.17
HMGN1P28-201ENST00000521340 KRTAP3-2Q9BYR7 98 aa7.73□□□□□ -1.17
HMGN1P28-201ENST00000521340 NBR1Q14596 966 aa7.71□□□□□ -1.18
HMGN1P28-201ENST00000521340 MMRN1Q13201 1228 aa7.7□□□□□ -1.18
HMGN1P28-201ENST00000521340 PPP1R37O75864 691 aa7.69□□□□□ -1.18
HMGN1P28-201ENST00000521340 GPR153Q6NV75 609 aa7.69□□□□□ -1.18
HMGN1P28-201ENST00000521340 KIF3CO14782 793 aa7.67□□□□□ -1.18
HMGN1P28-201ENST00000521340 RIMBP2O15034 1052 aa7.67□□□□□ -1.18
HMGN1P28-201ENST00000521340 ZSWIM6Q9HCJ5 1215 aa7.67□□□□□ -1.18
HMGN1P28-201ENST00000521340 ERBB3P21860 1342 aa7.67□□□□□ -1.18
HMGN1P28-201ENST00000521340 KCNV2Q8TDN2 545 aa7.66□□□□□ -1.18
HMGN1P28-201ENST00000521340 C2orf72A6NCS6 295 aa7.65□□□□□ -1.18
HMGN1P28-201ENST00000521340 ARSIQ5FYB1 569 aa7.65□□□□□ -1.18
HMGN1P28-201ENST00000521340 VARS2Q5ST30 1063 aaKnown RBP7.64□□□□□ -1.19
HMGN1P28-201ENST00000521340 KHSRPQ92945 711 aaKnown RBP eCLIP7.64□□□□□ -1.19
HMGN1P28-201ENST00000521340 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.61□□□□□ -1.19
HMGN1P28-201ENST00000521340 P3H3Q8IVL6 736 aa7.59□□□□□ -1.19
HMGN1P28-201ENST00000521340 ZNF687Q8N1G0 1237 aa7.59□□□□□ -1.19
HMGN1P28-201ENST00000521340 NCKAP5LQ9HCH0 1330 aa7.58□□□□□ -1.2
HMGN1P28-201ENST00000521340 ZNF316A6NFI3 1004 aaPredicted RBP7.57□□□□□ -1.2
HMGN1P28-201ENST00000521340 SLC34A2O95436 690 aa7.56□□□□□ -1.2
HMGN1P28-201ENST00000521340 TMC2Q8TDI7 906 aa7.56□□□□□ -1.2
HMGN1P28-201ENST00000521340 ARHGEF1Q92888 912 aaKnown RBP7.55□□□□□ -1.2
HMGN1P28-201ENST00000521340 NUDT7P0C024 238 aa7.54□□□□□ -1.2
HMGN1P28-201ENST00000521340 MFSD10Q14728 455 aa7.54□□□□□ -1.2
HMGN1P28-201ENST00000521340 PCDHGA4Q9Y5G9 962 aa7.54□□□□□ -1.2
HMGN1P28-201ENST00000521340 CRISPLD2Q9H0B8 497 aa7.53□□□□□ -1.2
HMGN1P28-201ENST00000521340 LMOD2Q6P5Q4 547 aa7.52□□□□□ -1.21
HMGN1P28-201ENST00000521340 WDR70Q9NW82 654 aa7.52□□□□□ -1.21
HMGN1P28-201ENST00000521340 ARIH1Q9Y4X5 557 aaPredicted RBP7.52□□□□□ -1.21
HMGN1P28-201ENST00000521340 TESPA1A2RU30 521 aaPredicted RBP7.51□□□□□ -1.21
HMGN1P28-201ENST00000521340 E2F4Q16254 413 aa7.51□□□□□ -1.21
HMGN1P28-201ENST00000521340 LHX6Q9UPM6 363 aa7.51□□□□□ -1.21
HMGN1P28-201ENST00000521340 KDM4FA0A1W2PPD8 638 aa7.5□□□□□ -1.21
HMGN1P28-201ENST00000521340 POTEEQ6S8J3 1075 aa7.5□□□□□ -1.21
HMGN1P28-201ENST00000521340 GPHNQ9NQX3 736 aaPredicted RBP7.5□□□□□ -1.21
HMGN1P28-201ENST00000521340 FOXK1P85037 733 aa7.49□□□□□ -1.21
HMGN1P28-201ENST00000521340 CAMK2BQ13554 666 aa7.49□□□□□ -1.21
HMGN1P28-201ENST00000521340 PLPP6Q8IY26 295 aa7.49□□□□□ -1.21
HMGN1P28-201ENST00000521340 SEMA3EO15041 775 aa7.48□□□□□ -1.21
HMGN1P28-201ENST00000521340 DSG2Q14126 1118 aa7.48□□□□□ -1.21
HMGN1P28-201ENST00000521340 PTCD2Q8WV60 388 aaKnown RBP7.48□□□□□ -1.21
HMGN1P28-201ENST00000521340 ANKRD13DQ6ZTN6 518 aa7.47□□□□□ -1.21
HMGN1P28-201ENST00000521340 RNF166Q96A37 237 aaPredicted RBP7.46□□□□□ -1.22
HMGN1P28-201ENST00000521340 MYT1LQ9UL68 1186 aa7.46□□□□□ -1.22
HMGN1P28-201ENST00000521340 AXIN2Q9Y2T1 843 aa7.46□□□□□ -1.22
HMGN1P28-201ENST00000521340 LSM11P83369 360 aaKnown RBP eCLIP7.45□□□□□ -1.22
HMGN1P28-201ENST00000521340 ZC3H15Q8WU90 426 aaKnown RBP7.45□□□□□ -1.22
HMGN1P28-201ENST00000521340 LARP6Q9BRS8 491 aaKnown RBP7.45□□□□□ -1.22
HMGN1P28-201ENST00000521340 PDE4AP27815 886 aa7.44□□□□□ -1.22
HMGN1P28-201ENST00000521340 PBX2P40425 430 aa7.42□□□□□ -1.22
HMGN1P28-201ENST00000521340 TMEM132AQ24JP5 1023 aa7.42□□□□□ -1.22
HMGN1P28-201ENST00000521340 BRPF1P55201 1214 aaPredicted RBP7.41□□□□□ -1.22
HMGN1P28-201ENST00000521340 PTGER2P43116 358 aa7.4□□□□□ -1.22
HMGN1P28-201ENST00000521340 TIMELESSQ9UNS1 1208 aa7.4□□□□□ -1.22
HMGN1P28-201ENST00000521340 ZMYND10O75800 440 aa7.39□□□□□ -1.23
HMGN1P28-201ENST00000521340 OXER1Q8TDS5 423 aa7.39□□□□□ -1.23
HMGN1P28-201ENST00000521340 DDX27Q96GQ7 796 aaKnown RBP7.39□□□□□ -1.23
HMGN1P28-201ENST00000521340 GTF3C3Q9Y5Q9 886 aa7.39□□□□□ -1.23
HMGN1P28-201ENST00000521340 PSDA5PKW4 1024 aaPredicted RBP7.38□□□□□ -1.23
HMGN1P28-201ENST00000521340 ARHGAP33O14559 1287 aa7.38□□□□□ -1.23
HMGN1P28-201ENST00000521340 TBC1D12O60347 775 aa7.38□□□□□ -1.23
HMGN1P28-201ENST00000521340 DMRTA1Q5VZB9 504 aa7.37□□□□□ -1.23
HMGN1P28-201ENST00000521340 EMILIN3Q9NT22 766 aa7.37□□□□□ -1.23
HMGN1P28-201ENST00000521340 PSEN2P49810 448 aa7.36□□□□□ -1.23
HMGN1P28-201ENST00000521340 PPP1R15BQ5SWA1 713 aa7.36□□□□□ -1.23
HMGN1P28-201ENST00000521340 UPF1Q92900 1129 aaKnown RBP eCLIP7.36□□□□□ -1.23
HMGN1P28-201ENST00000521340 ADGRD1Q6QNK2 874 aa7.35□□□□□ -1.23
HMGN1P28-201ENST00000521340 TULP1O00294 542 aaPredicted RBP7.34□□□□□ -1.23
HMGN1P28-201ENST00000521340 MLLT3P42568 568 aaPredicted RBP7.34□□□□□ -1.23
HMGN1P28-201ENST00000521340 PPP4R3BQ5MIZ7 849 aa7.34□□□□□ -1.23
HMGN1P28-201ENST00000521340 BARGINQ6ZT62 677 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms