RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 FYCO1Q9BQS8 1478 aa25.65■■□□□ 1.7
CLN8-205ENST00000520991 HECW2Q9P2P5 1572 aa25.65■■□□□ 1.7
CLN8-205ENST00000520991 POGZQ7Z3K3 1410 aa25.65■■□□□ 1.7
CLN8-205ENST00000520991 ZFYVE16Q7Z3T8 1539 aa25.65■■□□□ 1.7
CLN8-205ENST00000520991 BCORL1Q5H9F3 1711 aa25.64■■□□□ 1.7
CLN8-205ENST00000520991 ARHGAP5Q13017 1502 aa25.64■■□□□ 1.7
CLN8-205ENST00000520991 MAGI2Q86UL8 1455 aa25.63■■□□□ 1.69
CLN8-205ENST00000520991 YEATS2Q9ULM3 1422 aa25.61■■□□□ 1.69
CLN8-205ENST00000520991 PTPRMP28827 1452 aa25.59■■□□□ 1.69
CLN8-205ENST00000520991 MADDQ8WXG6 1647 aa25.58■■□□□ 1.69
CLN8-205ENST00000520991 ZNF518AQ6AHZ1 1483 aa25.54■■□□□ 1.68
CLN8-205ENST00000520991 PREX2Q70Z35 1606 aa25.53■■□□□ 1.68
CLN8-205ENST00000520991 CDC42BPBQ9Y5S2 1711 aa25.53■■□□□ 1.68
CLN8-205ENST00000520991 SIGLEC1Q9BZZ2 1709 aa25.5■■□□□ 1.67
CLN8-205ENST00000520991 RIMS1Q86UR5 1692 aaKnown RBP25.5■■□□□ 1.67
CLN8-205ENST00000520991 ATP10AO60312 1499 aa25.49■■□□□ 1.67
CLN8-205ENST00000520991 AFAP1Q8N556 730 aa25.48■■□□□ 1.67
CLN8-205ENST00000520991 C9orf84Q5VXU9 1444 aa25.48■■□□□ 1.67
CLN8-205ENST00000520991 KDM5CP41229 1560 aa25.47■■□□□ 1.67
CLN8-205ENST00000520991 MYT1LQ9UL68 1186 aa25.47■■□□□ 1.67
CLN8-205ENST00000520991 MLECQ14165 292 aa25.46■■□□□ 1.67
CLN8-205ENST00000520991 CDC42BPAQ5VT25 1732 aa25.46■■□□□ 1.67
CLN8-205ENST00000520991 ABCC1P33527 1531 aa25.45■■□□□ 1.67
CLN8-205ENST00000520991 CEP162Q5TB80 1403 aa25.45■■□□□ 1.66
CLN8-205ENST00000520991 ITSN2Q9NZM3 1697 aa25.41■■□□□ 1.66
CLN8-205ENST00000520991 MTUS2Q5JR59 1369 aa25.4■■□□□ 1.66
CLN8-205ENST00000520991 TRAPPC8Q9Y2L5 1435 aa25.4■■□□□ 1.66
CLN8-205ENST00000520991 FER1L4A9Z1Z3 1794 aa25.39■■□□□ 1.66
CLN8-205ENST00000520991 PLPPR3Q6T4P5 718 aa25.39■■□□□ 1.66
CLN8-205ENST00000520991 ARHGEF12Q9NZN5 1544 aa25.39■■□□□ 1.66
CLN8-205ENST00000520991 ZNF777Q9ULD5 760 aaPredicted RBP25.38■■□□□ 1.65
CLN8-205ENST00000520991 MLH3Q9UHC1 1453 aa25.38■■□□□ 1.65
CLN8-205ENST00000520991 GPATCH8Q9UKJ3 1502 aaKnown RBP25.37■■□□□ 1.65
CLN8-205ENST00000520991 DIP2CQ9Y2E4 1556 aa25.37■■□□□ 1.65
CLN8-205ENST00000520991 CCNB3Q8WWL7 1395 aa25.35■■□□□ 1.65
CLN8-205ENST00000520991 ABCA6Q8N139 1617 aa25.35■■□□□ 1.65
CLN8-205ENST00000520991 SAMD9LQ8IVG5 1584 aa25.34■■□□□ 1.65
CLN8-205ENST00000520991 LMTK3Q96Q04 1460 aa25.32■■□□□ 1.64
CLN8-205ENST00000520991 EHBP1L1Q8N3D4 1523 aa25.32■■□□□ 1.64
CLN8-205ENST00000520991 SYCP2Q9BX26 1530 aa25.32■■□□□ 1.64
CLN8-205ENST00000520991 CFDP1Q9UEE9 299 aaPredicted RBP25.32■■□□□ 1.64
CLN8-205ENST00000520991 REREQ9P2R6 1566 aa25.32■■□□□ 1.64
CLN8-205ENST00000520991 PLEKHH2Q8IVE3 1493 aa25.28■■□□□ 1.64
CLN8-205ENST00000520991 KIDINS220Q9ULH0 1771 aa25.28■■□□□ 1.64
CLN8-205ENST00000520991 LOC105371045A0A1W2PR82 267 aa25.27■■□□□ 1.64
CLN8-205ENST00000520991 HNRNPMP52272 730 aaKnown RBP eCLIP25.27■■□□□ 1.646e-8■□□□□ 11
CLN8-205ENST00000520991 KIAA1107Q9UPP5 1409 aa25.25■■□□□ 1.63
CLN8-205ENST00000520991 TIAM1Q13009 1591 aa25.25■■□□□ 1.63
CLN8-205ENST00000520991 SPAG9O60271 1321 aaKnown RBP25.24■■□□□ 1.63
CLN8-205ENST00000520991 AGLP35573 1532 aa25.24■■□□□ 1.63
CLN8-205ENST00000520991 ILDR1Q86SU0 546 aaPredicted RBP25.2■■□□□ 1.62
CLN8-205ENST00000520991 CEBPAP49715 358 aaPredicted RBP25.19■■□□□ 1.62
CLN8-205ENST00000520991 HSPA2P54652 639 aa25.19■■□□□ 1.62
CLN8-205ENST00000520991 ESF1Q9H501 851 aaKnown RBP25.19■■□□□ 1.62
CLN8-205ENST00000520991 ATP7AQ04656 1500 aa25.19■■□□□ 1.62
CLN8-205ENST00000520991 VPS8Q8N3P4 1428 aa25.17■■□□□ 1.62
CLN8-205ENST00000520991 SUPT6HQ7KZ85 1726 aaKnown RBP25.17■■□□□ 1.62
CLN8-205ENST00000520991 INO80Q9ULG1 1556 aaPredicted RBP25.16■■□□□ 1.62
CLN8-205ENST00000520991 ZNF644Q9H582 1327 aaPredicted RBP25.15■■□□□ 1.62
CLN8-205ENST00000520991 PREX1Q8TCU6 1659 aa25.15■■□□□ 1.62
CLN8-205ENST00000520991 NCOA2Q15596 1464 aa25.14■■□□□ 1.62
CLN8-205ENST00000520991 A2MP01023 1474 aa25.1■■□□□ 1.61
CLN8-205ENST00000520991 C3P01024 1663 aa25.1■■□□□ 1.61
CLN8-205ENST00000520991 CNTLNQ9NXG0 1405 aa25.1■■□□□ 1.61
CLN8-205ENST00000520991 MBD5Q9P267 1494 aa25.1■■□□□ 1.61
CLN8-205ENST00000520991 UHRF1BP1Q6BDS2 1440 aa25.08■■□□□ 1.61
CLN8-205ENST00000520991 PLXNC1O60486 1568 aa25.08■■□□□ 1.6
CLN8-205ENST00000520991 LRRC9Q6ZRR7 1453 aa25.07■■□□□ 1.6
CLN8-205ENST00000520991 CAMSAP2Q08AD1 1489 aa25.05■■□□□ 1.6
CLN8-205ENST00000520991 ADGBQ8N7X0 1667 aa25.05■■□□□ 1.6
CLN8-205ENST00000520991 CCDC141Q6ZP82 1450 aa25.03■■□□□ 1.6
CLN8-205ENST00000520991 SETD1BQ9UPS6 1966 aaKnown RBP25.03■■□□□ 1.6
CLN8-205ENST00000520991 RTEL1-TNFRSF6BF6WH68 1400 aa25.02■■□□□ 1.6
CLN8-205ENST00000520991 MROH2AA6NES4 1674 aa25.01■■□□□ 1.59
CLN8-205ENST00000520991 MAP3K1Q13233 1512 aa25■■□□□ 1.59
CLN8-205ENST00000520991 GGT6Q6P531 493 aa24.99■■□□□ 1.59
CLN8-205ENST00000520991 RSPH4AQ5TD94 716 aa24.98■■□□□ 1.59
CLN8-205ENST00000520991 CLTCQ00610 1675 aaKnown RBP24.97■■□□□ 1.59
CLN8-205ENST00000520991 ZMYM3Q14202 1370 aa24.97■■□□□ 1.59
CLN8-205ENST00000520991 KANK4Q5T7N3 995 aaPredicted RBP24.96■■□□□ 1.59
CLN8-205ENST00000520991 FBXO41Q8TF61 875 aa24.95■■□□□ 1.58
CLN8-205ENST00000520991 ARHGEF5Q12774 1597 aa24.94■■□□□ 1.58
CLN8-205ENST00000520991 NPATQ14207 1427 aa24.94■■□□□ 1.58
CLN8-205ENST00000520991 DHX29Q7Z478 1369 aaKnown RBP24.94■■□□□ 1.58
CLN8-205ENST00000520991 TSPY4P0CV99 314 aa24.91■■□□□ 1.58
CLN8-205ENST00000520991 TSPY10P0CW01 314 aa24.91■■□□□ 1.58
CLN8-205ENST00000520991 APLP2Q06481 763 aa24.91■■□□□ 1.58
CLN8-205ENST00000520991 PPP6R1Q9UPN7 881 aa24.91■■□□□ 1.58
CLN8-205ENST00000520991 DMRT2Q9Y5R5 561 aa24.9■■□□□ 1.58
CLN8-205ENST00000520991 STRCQ7RTU9 1775 aa24.9■■□□□ 1.58
CLN8-205ENST00000520991 MYOM3Q5VTT5 1437 aa24.88■■□□□ 1.57
CLN8-205ENST00000520991 KIF3BO15066 747 aa24.87■■□□□ 1.57
CLN8-205ENST00000520991 MIA2Q96PC5 1412 aa24.86■■□□□ 1.57
CLN8-205ENST00000520991 PTPRKQ15262 1439 aa24.84■■□□□ 1.57
CLN8-205ENST00000520991 MYO3AQ8NEV4 1616 aa24.82■■□□□ 1.56
CLN8-205ENST00000520991 MAST1Q9Y2H9 1570 aa24.81■■□□□ 1.56
CLN8-205ENST00000520991 CERKQ8TCT0 537 aa24.81■■□□□ 1.56
CLN8-205ENST00000520991 NCOA1Q15788 1441 aa24.8■■□□□ 1.56
CLN8-205ENST00000520991 KDM5DQ9BY66 1539 aa24.8■■□□□ 1.56
CLN8-205ENST00000520991 FAM135AQ9P2D6 1515 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms