RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 LRRIQ1Q96JM4 1722 aa33.07■■■□□ 2.88
SNHG6-203ENST00000520944 ARHGAP5Q13017 1502 aa33.07■■■□□ 2.88
SNHG6-203ENST00000520944 ZMYM4Q5VZL5 1548 aa33.07■■■□□ 2.88
SNHG6-203ENST00000520944 ZFYVE16Q7Z3T8 1539 aa33.04■■■□□ 2.88
SNHG6-203ENST00000520944 YEATS2Q9ULM3 1422 aa33.03■■■□□ 2.88
SNHG6-203ENST00000520944 ADAMTSL3P82987 1691 aa33.01■■■□□ 2.88
SNHG6-203ENST00000520944 PTPRMP28827 1452 aa33■■■□□ 2.87
SNHG6-203ENST00000520944 BCORL1Q5H9F3 1711 aa32.98■■■□□ 2.87
SNHG6-203ENST00000520944 HECW2Q9P2P5 1572 aa32.98■■■□□ 2.87
SNHG6-203ENST00000520944 MYT1LQ9UL68 1186 aa32.98■■■□□ 2.87
SNHG6-203ENST00000520944 AFAP1Q8N556 730 aa32.97■■■□□ 2.87
SNHG6-203ENST00000520944 ZNF518AQ6AHZ1 1483 aa32.95■■■□□ 2.87
SNHG6-203ENST00000520944 MLECQ14165 292 aa32.92■■■□□ 2.86
SNHG6-203ENST00000520944 ATP10AO60312 1499 aa32.91■■■□□ 2.86
SNHG6-203ENST00000520944 MADDQ8WXG6 1647 aa32.89■■■□□ 2.86
SNHG6-203ENST00000520944 CEP162Q5TB80 1403 aa32.88■■■□□ 2.85
SNHG6-203ENST00000520944 CDC42BPBQ9Y5S2 1711 aa32.86■■■□□ 2.85
SNHG6-203ENST00000520944 ZNF777Q9ULD5 760 aaPredicted RBP32.86■■■□□ 2.85
SNHG6-203ENST00000520944 C9orf84Q5VXU9 1444 aa32.85■■■□□ 2.85
SNHG6-203ENST00000520944 MTUS2Q5JR59 1369 aa32.84■■■□□ 2.85
SNHG6-203ENST00000520944 PREX2Q70Z35 1606 aa32.84■■■□□ 2.85
SNHG6-203ENST00000520944 PLPPR3Q6T4P5 718 aa32.82■■■□□ 2.84
SNHG6-203ENST00000520944 KDM5CP41229 1560 aa32.81■■■□□ 2.84
SNHG6-203ENST00000520944 TRAPPC8Q9Y2L5 1435 aa32.79■■■□□ 2.84
SNHG6-203ENST00000520944 LOC105371045A0A1W2PR82 267 aa32.78■■■□□ 2.84
SNHG6-203ENST00000520944 CFDP1Q9UEE9 299 aaPredicted RBP32.78■■■□□ 2.84
SNHG6-203ENST00000520944 CCNB3Q8WWL7 1395 aa32.78■■■□□ 2.84
SNHG6-203ENST00000520944 ABCC1P33527 1531 aa32.77■■■□□ 2.84
SNHG6-203ENST00000520944 ARHGEF12Q9NZN5 1544 aa32.77■■■□□ 2.84
SNHG6-203ENST00000520944 GPATCH8Q9UKJ3 1502 aaKnown RBP32.77■■■□□ 2.84
SNHG6-203ENST00000520944 RIMS1Q86UR5 1692 aaKnown RBP32.77■■■□□ 2.84
SNHG6-203ENST00000520944 MLH3Q9UHC1 1453 aa32.76■■■□□ 2.84
SNHG6-203ENST00000520944 SIGLEC1Q9BZZ2 1709 aa32.76■■■□□ 2.83
SNHG6-203ENST00000520944 CDC42BPAQ5VT25 1732 aa32.74■■■□□ 2.83
SNHG6-203ENST00000520944 HNRNPMP52272 730 aaKnown RBP eCLIP32.71■■■□□ 2.83
SNHG6-203ENST00000520944 ITSN2Q9NZM3 1697 aa32.67■■■□□ 2.82
SNHG6-203ENST00000520944 DIP2CQ9Y2E4 1556 aa32.66■■■□□ 2.82
SNHG6-203ENST00000520944 SPAG9O60271 1321 aaKnown RBP32.66■■■□□ 2.82
SNHG6-203ENST00000520944 PLEKHH2Q8IVE3 1493 aa32.64■■■□□ 2.82
SNHG6-203ENST00000520944 SAMD9LQ8IVG5 1584 aa32.64■■■□□ 2.82
SNHG6-203ENST00000520944 KIAA1107Q9UPP5 1409 aa32.64■■■□□ 2.82
SNHG6-203ENST00000520944 EHBP1L1Q8N3D4 1523 aa32.62■■■□□ 2.81
SNHG6-203ENST00000520944 ESF1Q9H501 851 aaKnown RBP32.62■■■□□ 2.81
SNHG6-203ENST00000520944 FER1L4A9Z1Z3 1794 aa32.62■■■□□ 2.81
SNHG6-203ENST00000520944 SYCP2Q9BX26 1530 aa32.61■■■□□ 2.81
SNHG6-203ENST00000520944 LMTK3Q96Q04 1460 aa32.61■■■□□ 2.81
SNHG6-203ENST00000520944 ABCA6Q8N139 1617 aa32.61■■■□□ 2.81
SNHG6-203ENST00000520944 REREQ9P2R6 1566 aa32.61■■■□□ 2.81
SNHG6-203ENST00000520944 CEBPAP49715 358 aaPredicted RBP32.58■■■□□ 2.81
SNHG6-203ENST00000520944 HSPA2P54652 639 aa32.55■■■□□ 2.8
SNHG6-203ENST00000520944 AGLP35573 1532 aa32.55■■■□□ 2.8
SNHG6-203ENST00000520944 KIDINS220Q9ULH0 1771 aa32.55■■■□□ 2.8
SNHG6-203ENST00000520944 ZNF644Q9H582 1327 aaPredicted RBP32.54■■■□□ 2.8
SNHG6-203ENST00000520944 ILDR1Q86SU0 546 aaPredicted RBP32.53■■■□□ 2.8
SNHG6-203ENST00000520944 VPS8Q8N3P4 1428 aa32.52■■■□□ 2.8
SNHG6-203ENST00000520944 TIAM1Q13009 1591 aa32.51■■■□□ 2.79
SNHG6-203ENST00000520944 NCOA2Q15596 1464 aa32.46■■■□□ 2.79
SNHG6-203ENST00000520944 ATP7AQ04656 1500 aa32.46■■■□□ 2.79
SNHG6-203ENST00000520944 SUPT6HQ7KZ85 1726 aaKnown RBP32.41■■■□□ 2.78
SNHG6-203ENST00000520944 CNTLNQ9NXG0 1405 aa32.41■■■□□ 2.78
SNHG6-203ENST00000520944 MBD5Q9P267 1494 aa32.41■■■□□ 2.78
SNHG6-203ENST00000520944 A2MP01023 1474 aa32.4■■■□□ 2.78
SNHG6-203ENST00000520944 RSPH4AQ5TD94 716 aa32.39■■■□□ 2.78
SNHG6-203ENST00000520944 INO80Q9ULG1 1556 aaPredicted RBP32.37■■■□□ 2.77
SNHG6-203ENST00000520944 LRRC9Q6ZRR7 1453 aa32.37■■■□□ 2.77
SNHG6-203ENST00000520944 UHRF1BP1Q6BDS2 1440 aa32.35■■■□□ 2.77
SNHG6-203ENST00000520944 GGT6Q6P531 493 aa32.35■■■□□ 2.77
SNHG6-203ENST00000520944 RTEL1-TNFRSF6BF6WH68 1400 aa32.34■■■□□ 2.77
SNHG6-203ENST00000520944 KANK4Q5T7N3 995 aaPredicted RBP32.33■■■□□ 2.77
SNHG6-203ENST00000520944 PREX1Q8TCU6 1659 aa32.32■■■□□ 2.76
SNHG6-203ENST00000520944 CAMSAP2Q08AD1 1489 aa32.31■■■□□ 2.76
SNHG6-203ENST00000520944 APLP2Q06481 763 aa32.31■■■□□ 2.76
SNHG6-203ENST00000520944 MAP3K1Q13233 1512 aa32.3■■■□□ 2.76
SNHG6-203ENST00000520944 CCDC141Q6ZP82 1450 aa32.29■■■□□ 2.76
SNHG6-203ENST00000520944 SETD1BQ9UPS6 1966 aaKnown RBP32.29■■■□□ 2.76
SNHG6-203ENST00000520944 TSPY4P0CV99 314 aa32.29■■■□□ 2.76
SNHG6-203ENST00000520944 TSPY10P0CW01 314 aa32.29■■■□□ 2.76
SNHG6-203ENST00000520944 ZMYM3Q14202 1370 aa32.29■■■□□ 2.76
SNHG6-203ENST00000520944 PPP6R1Q9UPN7 881 aa32.28■■■□□ 2.76
SNHG6-203ENST00000520944 PLXNC1O60486 1568 aa32.28■■■□□ 2.76
SNHG6-203ENST00000520944 C3P01024 1663 aa32.27■■■□□ 2.76
SNHG6-203ENST00000520944 DHX29Q7Z478 1369 aaKnown RBP32.26■■■□□ 2.75
SNHG6-203ENST00000520944 DMRT2Q9Y5R5 561 aa32.24■■■□□ 2.75
SNHG6-203ENST00000520944 ADGBQ8N7X0 1667 aa32.23■■■□□ 2.75
SNHG6-203ENST00000520944 FBXO41Q8TF61 875 aa32.22■■■□□ 2.75
SNHG6-203ENST00000520944 NPATQ14207 1427 aa32.19■■■□□ 2.74
SNHG6-203ENST00000520944 KIF3BO15066 747 aa32.19■■■□□ 2.74
SNHG6-203ENST00000520944 MROH2AA6NES4 1674 aa32.17■■■□□ 2.74
SNHG6-203ENST00000520944 MYOM3Q5VTT5 1437 aa32.15■■■□□ 2.74
SNHG6-203ENST00000520944 MIA2Q96PC5 1412 aa32.15■■■□□ 2.74
SNHG6-203ENST00000520944 ARHGEF5Q12774 1597 aa32.15■■■□□ 2.74
SNHG6-203ENST00000520944 CLTCQ00610 1675 aaKnown RBP32.12■■■□□ 2.73
SNHG6-203ENST00000520944 WASHC2CQ9Y4E1 1318 aa32.07■■■□□ 2.72
SNHG6-203ENST00000520944 CERKQ8TCT0 537 aa32.07■■■□□ 2.72
SNHG6-203ENST00000520944 PTPRKQ15262 1439 aa32.07■■■□□ 2.72
SNHG6-203ENST00000520944 STRCQ7RTU9 1775 aa32.03■■■□□ 2.72
SNHG6-203ENST00000520944 PTPRTO14522 1441 aa32■■■□□ 2.71
SNHG6-203ENST00000520944 NCOA1Q15788 1441 aa31.99■■■□□ 2.71
SNHG6-203ENST00000520944 MAST1Q9Y2H9 1570 aa31.98■■■□□ 2.71
SNHG6-203ENST00000520944 KDM5DQ9BY66 1539 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms