RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 POTEFA5A3E0 1075 aa13.6□□□□□ -0.23
SHPRH-208ENST00000520752 L3MBTL3Q96JM7 780 aaPredicted RBP13.6□□□□□ -0.23
SHPRH-208ENST00000520752 CRISPLD2Q9H0B8 497 aa13.6□□□□□ -0.23
SHPRH-208ENST00000520752 METRNQ9UJH8 293 aa13.6□□□□□ -0.23
SHPRH-208ENST00000520752 BOLA1Q9Y3E2 137 aa13.6□□□□□ -0.23
SHPRH-208ENST00000520752 ZEB1P37275 1124 aaPredicted RBP13.58□□□□□ -0.24
SHPRH-208ENST00000520752 MFSD10Q14728 455 aa13.56□□□□□ -0.24
SHPRH-208ENST00000520752 G3V3G9 751 aa13.55□□□□□ -0.24
SHPRH-208ENST00000520752 LARP6Q9BRS8 491 aaKnown RBP13.55□□□□□ -0.24
SHPRH-208ENST00000520752 P3H3Q8IVL6 736 aa13.54□□□□□ -0.24
SHPRH-208ENST00000520752 PPARGC1BQ86YN6 1023 aaKnown RBP13.53□□□□□ -0.24
SHPRH-208ENST00000520752 GPHNQ9NQX3 736 aaPredicted RBP13.53□□□□□ -0.24
SHPRH-208ENST00000520752 DDX27Q96GQ7 796 aaKnown RBP13.5□□□□□ -0.25
SHPRH-208ENST00000520752 CENPBP07199 599 aaPredicted RBP13.48□□□□□ -0.25
SHPRH-208ENST00000520752 E2F4Q16254 413 aa13.48□□□□□ -0.25
SHPRH-208ENST00000520752 KCNV2Q8TDN2 545 aa13.47□□□□□ -0.25
SHPRH-208ENST00000520752 PRKCSHP14314 528 aaPredicted RBP13.46□□□□□ -0.25
SHPRH-208ENST00000520752 TMC2Q8TDI7 906 aa13.45□□□□□ -0.26
SHPRH-208ENST00000520752 KIF3CO14782 793 aa13.44□□□□□ -0.26
SHPRH-208ENST00000520752 NBR1Q14596 966 aa13.44□□□□□ -0.26
SHPRH-208ENST00000520752 BCL11AQ9H165 835 aa13.44□□□□□ -0.26
SHPRH-208ENST00000520752 ACIN1Q9UKV3 1341 aaKnown RBP13.42□□□□□ -0.26
SHPRH-208ENST00000520752 FOXK1P85037 733 aa13.42□□□□□ -0.26
SHPRH-208ENST00000520752 CAMK2BQ13554 666 aa13.42□□□□□ -0.26
SHPRH-208ENST00000520752 PPP1R15BQ5SWA1 713 aa13.42□□□□□ -0.26
SHPRH-208ENST00000520752 ARHGEF1Q92888 912 aaKnown RBP13.42□□□□□ -0.26
SHPRH-208ENST00000520752 PCGF6Q9BYE7 350 aa13.41□□□□□ -0.26
SHPRH-208ENST00000520752 C2orf72A6NCS6 295 aa13.4□□□□□ -0.26
SHPRH-208ENST00000520752 DSG2Q14126 1118 aa13.4□□□□□ -0.26
SHPRH-208ENST00000520752 ARIH1Q9Y4X5 557 aaPredicted RBP13.39□□□□□ -0.27
SHPRH-208ENST00000520752 DCAF1Q9Y4B6 1507 aa13.39□□□□□ -0.27
SHPRH-208ENST00000520752 TMEM92Q6UXU6 159 aa13.38□□□□□ -0.27
SHPRH-208ENST00000520752 C3orf67Q6ZVT6 689 aa13.37□□□□□ -0.27
SHPRH-208ENST00000520752 PLPP6Q8IY26 295 aa13.34□□□□□ -0.27
SHPRH-208ENST00000520752 CCDC180Q9P1Z9 1646 aa13.31□□□□□ -0.28
SHPRH-208ENST00000520752 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.31□□□□□ -0.28
SHPRH-208ENST00000520752 POTEB2H3BUK9 544 aa13.28□□□□□ -0.28
SHPRH-208ENST00000520752 POTEJP0CG39 1038 aa13.28□□□□□ -0.28
SHPRH-208ENST00000520752 EMILIN3Q9NT22 766 aa13.27□□□□□ -0.29
SHPRH-208ENST00000520752 MAMSTRQ6ZN01 415 aa13.22□□□□□ -0.29
SHPRH-208ENST00000520752 TESPA1A2RU30 521 aaPredicted RBP13.19□□□□□ -0.3
SHPRH-208ENST00000520752 SPDYE16A6NNV3 312 aaPredicted RBP13.19□□□□□ -0.3
SHPRH-208ENST00000520752 DPYSL4O14531 572 aa13.19□□□□□ -0.3
SHPRH-208ENST00000520752 SEMA3EO15041 775 aa13.19□□□□□ -0.3
SHPRH-208ENST00000520752 FAM9AQ8IZU1 332 aaPredicted RBP13.19□□□□□ -0.3
SHPRH-208ENST00000520752 OXER1Q8TDS5 423 aa13.19□□□□□ -0.3
SHPRH-208ENST00000520752 SLC34A2O95436 690 aa13.18□□□□□ -0.3
SHPRH-208ENST00000520752 SCUBE2Q9NQ36 999 aa13.17□□□□□ -0.3
SHPRH-208ENST00000520752 GTF3C3Q9Y5Q9 886 aa13.17□□□□□ -0.3
SHPRH-208ENST00000520752 TRIM26Q12899 539 aaPredicted RBP13.16□□□□□ -0.3
SHPRH-208ENST00000520752 PDIA6Q15084 440 aa13.16□□□□□ -0.3
SHPRH-208ENST00000520752 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
SHPRH-208ENST00000520752 PTCD2Q8WV60 388 aaKnown RBP13.15□□□□□ -0.3
SHPRH-208ENST00000520752 MYO15BQ96JP2 1530 aa13.14□□□□□ -0.31
SHPRH-208ENST00000520752 NEUROD1Q13562 356 aa13.13□□□□□ -0.31
SHPRH-208ENST00000520752 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.13□□□□□ -0.31
SHPRH-208ENST00000520752 TULP1O00294 542 aaPredicted RBP13.12□□□□□ -0.31
SHPRH-208ENST00000520752 UPF1Q92900 1129 aaKnown RBP eCLIP13.12□□□□□ -0.31
SHPRH-208ENST00000520752 ANP32EQ9BTT0 268 aa13.12□□□□□ -0.31
SHPRH-208ENST00000520752 SMYD5Q6GMV2 418 aa13.11□□□□□ -0.31
SHPRH-208ENST00000520752 SLAIN1Q8ND83 568 aa13.11□□□□□ -0.31
SHPRH-208ENST00000520752 TBC1D12O60347 775 aa13.1□□□□□ -0.31
SHPRH-208ENST00000520752 TPRNQ4KMQ1 711 aa13.08□□□□□ -0.32
SHPRH-208ENST00000520752 LMOD2Q6P5Q4 547 aa13.06□□□□□ -0.32
SHPRH-208ENST00000520752 MLLT3P42568 568 aaPredicted RBP13.04□□□□□ -0.32
SHPRH-208ENST00000520752 PTGER2P43116 358 aa13.04□□□□□ -0.32
SHPRH-208ENST00000520752 EVI5O60447 810 aa13.03□□□□□ -0.32
SHPRH-208ENST00000520752 HOXB3P14651 431 aaPredicted RBP13.03□□□□□ -0.32
SHPRH-208ENST00000520752 ANO8Q9HCE9 1232 aaPredicted RBP13.03□□□□□ -0.32
SHPRH-208ENST00000520752 CLSPNQ9HAW4 1339 aa13.03□□□□□ -0.32
SHPRH-208ENST00000520752 DOK7Q18PE1 504 aa13.02□□□□□ -0.33
SHPRH-208ENST00000520752 OTUD5Q96G74 571 aa13.02□□□□□ -0.33
SHPRH-208ENST00000520752 PCDHGA4Q9Y5G9 962 aa13.02□□□□□ -0.33
SHPRH-208ENST00000520752 LHX8Q68G74 356 aa13.01□□□□□ -0.33
SHPRH-208ENST00000520752 ZSWIM6Q9HCJ5 1215 aa12.99□□□□□ -0.33
SHPRH-208ENST00000520752 KDM4FA0A1W2PPD8 638 aa12.98□□□□□ -0.33
SHPRH-208ENST00000520752 ZNF316A6NFI3 1004 aaPredicted RBP12.98□□□□□ -0.33
SHPRH-208ENST00000520752 RIMBP2O15034 1052 aa12.96□□□□□ -0.33
SHPRH-208ENST00000520752 SNPHO15079 494 aa12.96□□□□□ -0.33
SHPRH-208ENST00000520752 GRXCR2A6NFK2 248 aa12.94□□□□□ -0.34
SHPRH-208ENST00000520752 RBM26Q5T8P6 1007 aaKnown RBP12.93□□□□□ -0.34
SHPRH-208ENST00000520752 GPR153Q6NV75 609 aa12.93□□□□□ -0.34
SHPRH-208ENST00000520752 OSBPP22059 807 aa12.92□□□□□ -0.34
SHPRH-208ENST00000520752 DDX12PQ92771 950 aa12.92□□□□□ -0.34
SHPRH-208ENST00000520752 ARSIQ5FYB1 569 aa12.91□□□□□ -0.34
SHPRH-208ENST00000520752 ZNF710Q8N1W2 664 aa12.91□□□□□ -0.34
SHPRH-208ENST00000520752 ZC3H15Q8WU90 426 aaKnown RBP12.9□□□□□ -0.34
SHPRH-208ENST00000520752 PHF14O94880 888 aa12.87□□□□□ -0.35
SHPRH-208ENST00000520752 KHSRPQ92945 711 aaKnown RBP eCLIP12.86□□□□□ -0.35
SHPRH-208ENST00000520752 EPAS1Q99814 870 aa12.86□□□□□ -0.35
SHPRH-208ENST00000520752 NUDT7P0C024 238 aa12.85□□□□□ -0.35
SHPRH-208ENST00000520752 GPIHBP1Q8IV16 184 aa12.84□□□□□ -0.35
SHPRH-208ENST00000520752 HOXB1P14653 301 aaPredicted RBP12.83□□□□□ -0.36
SHPRH-208ENST00000520752 JPH4Q96JJ6 628 aa12.83□□□□□ -0.36
SHPRH-208ENST00000520752 PCDHGA10Q9Y5H3 936 aa12.83□□□□□ -0.36
SHPRH-208ENST00000520752 ZMYND10O75800 440 aa12.82□□□□□ -0.36
SHPRH-208ENST00000520752 PRIM1P49642 420 aaKnown RBP12.81□□□□□ -0.36
SHPRH-208ENST00000520752 FOSBP53539 338 aa12.81□□□□□ -0.36
SHPRH-208ENST00000520752 TYW1BQ6NUM6 668 aa12.8□□□□□ -0.36
SHPRH-208ENST00000520752 FBXW7Q969H0 707 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms