RNA–Protein interactions for RNA: ENST00000520712.1

CLVS1-206, Transcript of clavesin 1, humanhuman

TSL 4

Gene CLVS1, Length 661 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-206ENST00000520712 MS4A4AQ96JQ5 239 aa9.33□□□□□ -0.92
CLVS1-206ENST00000520712 BOLA1Q9Y3E2 137 aa9.32□□□□□ -0.92
CLVS1-206ENST00000520712 GTPBP6O43824 516 aaPredicted RBP9.3□□□□□ -0.92
CLVS1-206ENST00000520712 SPRYD3Q8NCJ5 442 aa9.3□□□□□ -0.92
CLVS1-206ENST00000520712 MARVELD3Q96A59 401 aa9.3□□□□□ -0.92
CLVS1-206ENST00000520712 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.27□□□□□ -0.93
CLVS1-206ENST00000520712 C3orf67Q6ZVT6 689 aa9.26□□□□□ -0.93
CLVS1-206ENST00000520712 PPP1R37O75864 691 aa9.25□□□□□ -0.93
CLVS1-206ENST00000520712 PAXIP1Q6ZW49 1069 aaPredicted RBP9.24□□□□□ -0.93
CLVS1-206ENST00000520712 MICALL2Q8IY33 904 aa9.24□□□□□ -0.93
CLVS1-206ENST00000520712 CFAP44Q96MT7 982 aa9.23□□□□□ -0.93
CLVS1-206ENST00000520712 EMP3P54852 163 aa9.21□□□□□ -0.94
CLVS1-206ENST00000520712 TMC2Q8TDI7 906 aa9.13□□□□□ -0.95
CLVS1-206ENST00000520712 HS3ST6Q96QI5 342 aa9.13□□□□□ -0.95
CLVS1-206ENST00000520712 KRTAP3-3Q9BYR6 98 aa9.13□□□□□ -0.95
CLVS1-206ENST00000520712 KRTAP3-2Q9BYR7 98 aa9.13□□□□□ -0.95
CLVS1-206ENST00000520712 FAM205CA6NFA0 338 aa9.12□□□□□ -0.95
CLVS1-206ENST00000520712 PDE4AP27815 886 aa9.12□□□□□ -0.95
CLVS1-206ENST00000520712 PLCB2Q00722 1185 aa9.12□□□□□ -0.95
CLVS1-206ENST00000520712 GPHNQ9NQX3 736 aaPredicted RBP9.1□□□□□ -0.95
CLVS1-206ENST00000520712 TMEM92Q6UXU6 159 aa9.09□□□□□ -0.95
CLVS1-206ENST00000520712 C2orf72A6NCS6 295 aa9.08□□□□□ -0.96
CLVS1-206ENST00000520712 KIF3CO14782 793 aa9.08□□□□□ -0.96
CLVS1-206ENST00000520712 POTEB3A0JP26 581 aa9.05□□□□□ -0.96
CLVS1-206ENST00000520712 FOXK1P85037 733 aa9.05□□□□□ -0.96
CLVS1-206ENST00000520712 POTEBQ6S5H4 581 aa9.05□□□□□ -0.96
CLVS1-206ENST00000520712 CRISPLD2Q9H0B8 497 aa9.05□□□□□ -0.96
CLVS1-206ENST00000520712 CADPS2Q86UW7 1296 aa9.04□□□□□ -0.96
CLVS1-206ENST00000520712 LARP6Q9BRS8 491 aaKnown RBP9.04□□□□□ -0.96
CLVS1-206ENST00000520712 NCKAP5LQ9HCH0 1330 aa9.03□□□□□ -0.96
CLVS1-206ENST00000520712 DOK7Q18PE1 504 aa9.02□□□□□ -0.97
CLVS1-206ENST00000520712 TSHZ2Q9NRE2 1034 aa9.02□□□□□ -0.97
CLVS1-206ENST00000520712 RNF166Q96A37 237 aaPredicted RBP9.01□□□□□ -0.97
CLVS1-206ENST00000520712 RIMBP2O15034 1052 aa9□□□□□ -0.97
CLVS1-206ENST00000520712 DSG2Q14126 1118 aa9□□□□□ -0.97
CLVS1-206ENST00000520712 PLPP6Q8IY26 295 aa9□□□□□ -0.97
CLVS1-206ENST00000520712 DDX27Q96GQ7 796 aaKnown RBP9□□□□□ -0.97
CLVS1-206ENST00000520712 HAP1P54257 671 aaPredicted RBP8.99□□□□□ -0.97
CLVS1-206ENST00000520712 MFSD10Q14728 455 aa8.99□□□□□ -0.97
CLVS1-206ENST00000520712 ZNF710Q8N1W2 664 aa8.99□□□□□ -0.97
CLVS1-206ENST00000520712 WDR70Q9NW82 654 aa8.99□□□□□ -0.97
CLVS1-206ENST00000520712 PPP1R15BQ5SWA1 713 aa8.98□□□□□ -0.97
CLVS1-206ENST00000520712 SLC34A2O95436 690 aa8.97□□□□□ -0.97
CLVS1-206ENST00000520712 HOXB3P14651 431 aaPredicted RBP8.97□□□□□ -0.97
CLVS1-206ENST00000520712 ZSWIM6Q9HCJ5 1215 aa8.97□□□□□ -0.97
CLVS1-206ENST00000520712 TBC1D12O60347 775 aa8.94□□□□□ -0.98
CLVS1-206ENST00000520712 PTCD2Q8WV60 388 aaKnown RBP8.92□□□□□ -0.98
CLVS1-206ENST00000520712 MYT1LQ9UL68 1186 aa8.92□□□□□ -0.98
CLVS1-206ENST00000520712 ERBB3P21860 1342 aa8.91□□□□□ -0.98
CLVS1-206ENST00000520712 HOXB1P14653 301 aaPredicted RBP8.9□□□□□ -0.98
CLVS1-206ENST00000520712 VSIG10Q8N0Z9 540 aa8.9□□□□□ -0.98
CLVS1-206ENST00000520712 E2F4Q16254 413 aa8.89□□□□□ -0.99
CLVS1-206ENST00000520712 GPR153Q6NV75 609 aa8.89□□□□□ -0.99
CLVS1-206ENST00000520712 PCDHGA4Q9Y5G9 962 aa8.89□□□□□ -0.99
CLVS1-206ENST00000520712 CAMK2BQ13554 666 aa8.88□□□□□ -0.99
CLVS1-206ENST00000520712 ARSIQ5FYB1 569 aa8.88□□□□□ -0.99
CLVS1-206ENST00000520712 MAP3K9P80192 1104 aa8.87□□□□□ -0.99
CLVS1-206ENST00000520712 OXER1Q8TDS5 423 aa8.87□□□□□ -0.99
CLVS1-206ENST00000520712 UPF1Q92900 1129 aaKnown RBP eCLIP8.84□□□□□ -0.99
CLVS1-206ENST00000520712 EMILIN3Q9NT22 766 aa8.83□□□□□ -1
CLVS1-206ENST00000520712 NUDT7P0C024 238 aa8.81□□□□□ -1
CLVS1-206ENST00000520712 PTGER2P43116 358 aa8.81□□□□□ -1
CLVS1-206ENST00000520712 VARS2Q5ST30 1063 aaKnown RBP8.81□□□□□ -1
CLVS1-206ENST00000520712 KHSRPQ92945 711 aaKnown RBP eCLIP8.81□□□□□ -1
CLVS1-206ENST00000520712 KDM2AQ9Y2K7 1162 aa8.81□□□□□ -1
CLVS1-206ENST00000520712 ZNF316A6NFI3 1004 aaPredicted RBP8.8□□□□□ -1
CLVS1-206ENST00000520712 P3H3Q8IVL6 736 aa8.8□□□□□ -1
CLVS1-206ENST00000520712 ARIH1Q9Y4X5 557 aaPredicted RBP8.8□□□□□ -1
CLVS1-206ENST00000520712 KDM4FA0A1W2PPD8 638 aa8.79□□□□□ -1
CLVS1-206ENST00000520712 ANO8Q9HCE9 1232 aaPredicted RBP8.79□□□□□ -1
CLVS1-206ENST00000520712 PSDA5PKW4 1024 aaPredicted RBP8.78□□□□□ -1
CLVS1-206ENST00000520712 EVI5O60447 810 aa8.78□□□□□ -1
CLVS1-206ENST00000520712 ARHGEF1Q92888 912 aaKnown RBP8.78□□□□□ -1
CLVS1-206ENST00000520712 SPDYE16A6NNV3 312 aaPredicted RBP8.77□□□□□ -1.01
CLVS1-206ENST00000520712 DPYSL4O14531 572 aa8.77□□□□□ -1.01
CLVS1-206ENST00000520712 LHX6Q9UPM6 363 aa8.76□□□□□ -1.01
CLVS1-206ENST00000520712 ZNF687Q8N1G0 1237 aa8.75□□□□□ -1.01
CLVS1-206ENST00000520712 KCNV2Q8TDN2 545 aa8.74□□□□□ -1.01
CLVS1-206ENST00000520712 PDIA6Q15084 440 aa8.72□□□□□ -1.01
CLVS1-206ENST00000520712 PPP4R3BQ5MIZ7 849 aa8.7□□□□□ -1.02
CLVS1-206ENST00000520712 ANKRD13DQ6ZTN6 518 aa8.7□□□□□ -1.02
CLVS1-206ENST00000520712 ZNF454Q8N9F8 522 aa8.68□□□□□ -1.02
CLVS1-206ENST00000520712 JPH4Q96JJ6 628 aa8.68□□□□□ -1.02
CLVS1-206ENST00000520712 PHF14O94880 888 aa8.67□□□□□ -1.02
CLVS1-206ENST00000520712 FOSBP53539 338 aa8.67□□□□□ -1.02
CLVS1-206ENST00000520712 EPAS1Q99814 870 aa8.67□□□□□ -1.02
CLVS1-206ENST00000520712 PLA2G2EQ9NZK7 142 aa8.67□□□□□ -1.02
CLVS1-206ENST00000520712 FBXW7Q969H0 707 aa8.65□□□□□ -1.02
CLVS1-206ENST00000520712 ZDHHC16Q969W1 377 aa8.65□□□□□ -1.02
CLVS1-206ENST00000520712 PBX2P40425 430 aa8.64□□□□□ -1.03
CLVS1-206ENST00000520712 TYW1BQ6NUM6 668 aa8.64□□□□□ -1.03
CLVS1-206ENST00000520712 DDX12PQ92771 950 aa8.64□□□□□ -1.03
CLVS1-206ENST00000520712 PCDHGA10Q9Y5H3 936 aa8.64□□□□□ -1.03
CLVS1-206ENST00000520712 KCNH8Q96L42 1107 aa8.63□□□□□ -1.03
CLVS1-206ENST00000520712 GRXCR2A6NFK2 248 aa8.62□□□□□ -1.03
CLVS1-206ENST00000520712 ARHGAP33O14559 1287 aa8.62□□□□□ -1.03
CLVS1-206ENST00000520712 SMYD5Q6GMV2 418 aa8.61□□□□□ -1.03
CLVS1-206ENST00000520712 BCL2L12Q9HB09 334 aa8.61□□□□□ -1.03
CLVS1-206ENST00000520712 PTPREP23469 700 aa8.6□□□□□ -1.03
CLVS1-206ENST00000520712 SEMA3EO15041 775 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms