RNA–Protein interactions for RNA: ENST00000520619.1

SNHG6-202, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 3 BASIC

Gene SNHG6, Length 479 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-202ENST00000520619 CADPS2Q86UW7 1296 aa10.4□□□□□ -0.74
SNHG6-202ENST00000520619 KIF3CO14782 793 aa10.39□□□□□ -0.75
SNHG6-202ENST00000520619 C2orf72A6NCS6 295 aa10.38□□□□□ -0.75
SNHG6-202ENST00000520619 TMC2Q8TDI7 906 aa10.37□□□□□ -0.75
SNHG6-202ENST00000520619 NCKAP5LQ9HCH0 1330 aa10.36□□□□□ -0.75
SNHG6-202ENST00000520619 GPHNQ9NQX3 736 aaPredicted RBP10.36□□□□□ -0.75
SNHG6-202ENST00000520619 CRISPLD2Q9H0B8 497 aa10.35□□□□□ -0.75
SNHG6-202ENST00000520619 TSHZ2Q9NRE2 1034 aa10.35□□□□□ -0.75
SNHG6-202ENST00000520619 PDE4AP27815 886 aa10.33□□□□□ -0.76
SNHG6-202ENST00000520619 FOXK1P85037 733 aa10.3□□□□□ -0.76
SNHG6-202ENST00000520619 DSG2Q14126 1118 aa10.29□□□□□ -0.76
SNHG6-202ENST00000520619 LARP6Q9BRS8 491 aaKnown RBP10.29□□□□□ -0.76
SNHG6-202ENST00000520619 SNPHO15079 494 aa10.28□□□□□ -0.76
SNHG6-202ENST00000520619 HOXB3P14651 431 aaPredicted RBP10.27□□□□□ -0.77
SNHG6-202ENST00000520619 HAP1P54257 671 aaPredicted RBP10.27□□□□□ -0.77
SNHG6-202ENST00000520619 MFSD10Q14728 455 aa10.27□□□□□ -0.77
SNHG6-202ENST00000520619 PPP1R15BQ5SWA1 713 aa10.26□□□□□ -0.77
SNHG6-202ENST00000520619 PLPP6Q8IY26 295 aa10.26□□□□□ -0.77
SNHG6-202ENST00000520619 DDX27Q96GQ7 796 aaKnown RBP10.26□□□□□ -0.77
SNHG6-202ENST00000520619 DOK7Q18PE1 504 aa10.23□□□□□ -0.77
SNHG6-202ENST00000520619 FAM163AQ96GL9 167 aaPredicted RBP10.22□□□□□ -0.77
SNHG6-202ENST00000520619 ST18O60284 1047 aa10.19□□□□□ -0.78
SNHG6-202ENST00000520619 SLC34A2O95436 690 aa10.19□□□□□ -0.78
SNHG6-202ENST00000520619 LCE2DQ5TA82 110 aaPredicted RBP10.19□□□□□ -0.78
SNHG6-202ENST00000520619 ZNF710Q8N1W2 664 aa10.19□□□□□ -0.78
SNHG6-202ENST00000520619 RIMBP2O15034 1052 aa10.18□□□□□ -0.78
SNHG6-202ENST00000520619 ZSWIM6Q9HCJ5 1215 aa10.17□□□□□ -0.78
SNHG6-202ENST00000520619 WDR70Q9NW82 654 aa10.17□□□□□ -0.78
SNHG6-202ENST00000520619 CAMK2BQ13554 666 aa10.15□□□□□ -0.78
SNHG6-202ENST00000520619 GPR153Q6NV75 609 aa10.15□□□□□ -0.78
SNHG6-202ENST00000520619 PTCD2Q8WV60 388 aaKnown RBP10.15□□□□□ -0.78
SNHG6-202ENST00000520619 PCDHGA4Q9Y5G9 962 aa10.14□□□□□ -0.79
SNHG6-202ENST00000520619 HOXB1P14653 301 aaPredicted RBP10.13□□□□□ -0.79
SNHG6-202ENST00000520619 ARSIQ5FYB1 569 aa10.13□□□□□ -0.79
SNHG6-202ENST00000520619 OXER1Q8TDS5 423 aa10.13□□□□□ -0.79
SNHG6-202ENST00000520619 EMILIN3Q9NT22 766 aa10.13□□□□□ -0.79
SNHG6-202ENST00000520619 KDM2AQ9Y2K7 1162 aa10.13□□□□□ -0.79
SNHG6-202ENST00000520619 E2F4Q16254 413 aa10.12□□□□□ -0.79
SNHG6-202ENST00000520619 UPF1Q92900 1129 aaKnown RBP eCLIP10.12□□□□□ -0.79
SNHG6-202ENST00000520619 VSIG10Q8N0Z9 540 aa10.11□□□□□ -0.79
SNHG6-202ENST00000520619 KHSRPQ92945 711 aaKnown RBP eCLIP10.11□□□□□ -0.791e-11■■■□□ 18.1
SNHG6-202ENST00000520619 TBC1D12O60347 775 aa10.09□□□□□ -0.79
SNHG6-202ENST00000520619 MARVELD3Q96A59 401 aa10.09□□□□□ -0.79
SNHG6-202ENST00000520619 NUDT7P0C024 238 aa10.07□□□□□ -0.8
SNHG6-202ENST00000520619 EMP3P54852 163 aa10.06□□□□□ -0.8
SNHG6-202ENST00000520619 KDM4FA0A1W2PPD8 638 aa10.05□□□□□ -0.8
SNHG6-202ENST00000520619 DPYSL4O14531 572 aa10.05□□□□□ -0.8
SNHG6-202ENST00000520619 MAP3K9P80192 1104 aa10.05□□□□□ -0.8
SNHG6-202ENST00000520619 KCNV2Q8TDN2 545 aa10.03□□□□□ -0.8
SNHG6-202ENST00000520619 ARIH1Q9Y4X5 557 aaPredicted RBP10.03□□□□□ -0.8
SNHG6-202ENST00000520619 POTEMA6NI47 508 aa10.02□□□□□ -0.81
SNHG6-202ENST00000520619 POTEGQ6S5H5 508 aa10.02□□□□□ -0.81
SNHG6-202ENST00000520619 EVI5O60447 810 aa10.01□□□□□ -0.81
SNHG6-202ENST00000520619 FAM205CA6NFA0 338 aa10□□□□□ -0.81
SNHG6-202ENST00000520619 ZNF316A6NFI3 1004 aaPredicted RBP10□□□□□ -0.81
SNHG6-202ENST00000520619 P3H3Q8IVL6 736 aa10□□□□□ -0.81
SNHG6-202ENST00000520619 LHX6Q9UPM6 363 aa10□□□□□ -0.81
SNHG6-202ENST00000520619 ERBB3P21860 1342 aa10□□□□□ -0.81
SNHG6-202ENST00000520619 ARHGEF1Q92888 912 aaKnown RBP9.99□□□□□ -0.81
SNHG6-202ENST00000520619 SLC24A1O60721 1099 aa9.98□□□□□ -0.81
SNHG6-202ENST00000520619 HS3ST6Q96QI5 342 aa9.98□□□□□ -0.81
SNHG6-202ENST00000520619 ANO8Q9HCE9 1232 aaPredicted RBP9.98□□□□□ -0.81
SNHG6-202ENST00000520619 POTEB3A0JP26 581 aa9.97□□□□□ -0.81
SNHG6-202ENST00000520619 PDIA6Q15084 440 aa9.97□□□□□ -0.81
SNHG6-202ENST00000520619 VARS2Q5ST30 1063 aaKnown RBP9.97□□□□□ -0.81
SNHG6-202ENST00000520619 POTEBQ6S5H4 581 aa9.97□□□□□ -0.81
SNHG6-202ENST00000520619 SPDYE16A6NNV3 312 aaPredicted RBP9.95□□□□□ -0.82
SNHG6-202ENST00000520619 PSDA5PKW4 1024 aaPredicted RBP9.93□□□□□ -0.82
SNHG6-202ENST00000520619 PTGER2P43116 358 aa9.9□□□□□ -0.82
SNHG6-202ENST00000520619 FOSBP53539 338 aa9.9□□□□□ -0.82
SNHG6-202ENST00000520619 JPH4Q96JJ6 628 aa9.9□□□□□ -0.82
SNHG6-202ENST00000520619 ZNF454Q8N9F8 522 aa9.89□□□□□ -0.83
SNHG6-202ENST00000520619 PPP4R3BQ5MIZ7 849 aa9.88□□□□□ -0.83
SNHG6-202ENST00000520619 CDAN1Q8IWY9 1227 aa9.88□□□□□ -0.83
SNHG6-202ENST00000520619 ZNF687Q8N1G0 1237 aa9.88□□□□□ -0.83
SNHG6-202ENST00000520619 DDX12PQ92771 950 aa9.88□□□□□ -0.83
SNHG6-202ENST00000520619 PCDHGA10Q9Y5H3 936 aa9.87□□□□□ -0.83
SNHG6-202ENST00000520619 PHF14O94880 888 aa9.86□□□□□ -0.83
SNHG6-202ENST00000520619 GRXCR2A6NFK2 248 aa9.84□□□□□ -0.83
SNHG6-202ENST00000520619 SEMA3EO15041 775 aa9.84□□□□□ -0.83
SNHG6-202ENST00000520619 ZDHHC16Q969W1 377 aa9.84□□□□□ -0.83
SNHG6-202ENST00000520619 MLLT3P42568 568 aaPredicted RBP9.83□□□□□ -0.84
SNHG6-202ENST00000520619 TYW1BQ6NUM6 668 aa9.83□□□□□ -0.84
SNHG6-202ENST00000520619 POTEEQ6S8J3 1075 aa9.83□□□□□ -0.84
SNHG6-202ENST00000520619 NBR1Q14596 966 aa9.82□□□□□ -0.84
SNHG6-202ENST00000520619 FBXW7Q969H0 707 aa9.82□□□□□ -0.84
SNHG6-202ENST00000520619 EPAS1Q99814 870 aa9.82□□□□□ -0.84
SNHG6-202ENST00000520619 ADAM33Q9BZ11 813 aa9.82□□□□□ -0.84
SNHG6-202ENST00000520619 PCDH10Q9P2E7 1040 aa9.82□□□□□ -0.84
SNHG6-202ENST00000520619 KRTAP3-3Q9BYR6 98 aa9.81□□□□□ -0.84
SNHG6-202ENST00000520619 KRTAP3-2Q9BYR7 98 aa9.81□□□□□ -0.84
SNHG6-202ENST00000520619 OSBPP22059 807 aa9.8□□□□□ -0.84
SNHG6-202ENST00000520619 PBX2P40425 430 aa9.8□□□□□ -0.84
SNHG6-202ENST00000520619 BCL2L12Q9HB09 334 aa9.8□□□□□ -0.84
SNHG6-202ENST00000520619 AXIN2Q9Y2T1 843 aa9.8□□□□□ -0.84
SNHG6-202ENST00000520619 TESPA1A2RU30 521 aaPredicted RBP9.79□□□□□ -0.84
SNHG6-202ENST00000520619 ARHGAP33O14559 1287 aa9.79□□□□□ -0.84
SNHG6-202ENST00000520619 PRIM1P49642 420 aaKnown RBP9.79□□□□□ -0.84
SNHG6-202ENST00000520619 EN1Q05925 392 aaPredicted RBP9.78□□□□□ -0.84
SNHG6-202ENST00000520619 RBM33Q96EV2 1170 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms