RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 RIOK3O14730 519 aaKnown RBP9.26□□□□□ -0.93
TRAPPC13-212ENST00000520525 PKD2Q13563 968 aa9.25□□□□□ -0.93
TRAPPC13-212ENST00000520525 PHF8Q9UPP1 1060 aa9.25□□□□□ -0.93
TRAPPC13-212ENST00000520525 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC13-212ENST00000520525 ZFP91Q96JP5 570 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC13-212ENST00000520525 ARSIQ5FYB1 569 aa9.23□□□□□ -0.93
TRAPPC13-212ENST00000520525 VGFO15240 615 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC13-212ENST00000520525 ECM2O94769 699 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC13-212ENST00000520525 PTGER2P43116 358 aa9.18□□□□□ -0.94
TRAPPC13-212ENST00000520525 KHSRPQ92945 711 aaKnown RBP eCLIP9.18□□□□□ -0.94
TRAPPC13-212ENST00000520525 ZNF316A6NFI3 1004 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC13-212ENST00000520525 ANKRD13DQ6ZTN6 518 aa9.17□□□□□ -0.94
TRAPPC13-212ENST00000520525 RGL2O15211 777 aa9.16□□□□□ -0.94
TRAPPC13-212ENST00000520525 NLRP6P59044 892 aa9.16□□□□□ -0.94
TRAPPC13-212ENST00000520525 FBXO22Q8NEZ5 403 aa9.16□□□□□ -0.94
TRAPPC13-212ENST00000520525 LSM11P83369 360 aaKnown RBP eCLIP9.12□□□□□ -0.95
TRAPPC13-212ENST00000520525 KIF3CO14782 793 aa9.11□□□□□ -0.95
TRAPPC13-212ENST00000520525 BCL11BQ9C0K0 894 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC13-212ENST00000520525 C2orf72A6NCS6 295 aa9.08□□□□□ -0.96
TRAPPC13-212ENST00000520525 MFRPQ9BY79 579 aa9.08□□□□□ -0.96
TRAPPC13-212ENST00000520525 TAOK2Q9UL54 1235 aa9.08□□□□□ -0.96
TRAPPC13-212ENST00000520525 POTEEQ6S8J3 1075 aa9.07□□□□□ -0.96
TRAPPC13-212ENST00000520525 NUDT7P0C024 238 aa9.06□□□□□ -0.96
TRAPPC13-212ENST00000520525 PBX2P40425 430 aa9.06□□□□□ -0.96
TRAPPC13-212ENST00000520525 STK24Q9Y6E0 443 aa9.06□□□□□ -0.96
TRAPPC13-212ENST00000520525 STK25O00506 426 aa9.05□□□□□ -0.96
TRAPPC13-212ENST00000520525 SLC34A2O95436 690 aa9.04□□□□□ -0.96
TRAPPC13-212ENST00000520525 LHX6Q9UPM6 363 aa9.04□□□□□ -0.96
TRAPPC13-212ENST00000520525 AXIN2Q9Y2T1 843 aa9.03□□□□□ -0.96
TRAPPC13-212ENST00000520525 PCDHGA4Q9Y5G9 962 aa9.03□□□□□ -0.96
TRAPPC13-212ENST00000520525 PLA2G2EQ9NZK7 142 aa8.97□□□□□ -0.97
TRAPPC13-212ENST00000520525 HCSTQ9UBK5 93 aa8.97□□□□□ -0.97
TRAPPC13-212ENST00000520525 ARHGAP33O14559 1287 aa8.96□□□□□ -0.98
TRAPPC13-212ENST00000520525 TMC2Q8TDI7 906 aa8.96□□□□□ -0.98
TRAPPC13-212ENST00000520525 KDM4FA0A1W2PPD8 638 aa8.95□□□□□ -0.98
TRAPPC13-212ENST00000520525 ADGRD1Q6QNK2 874 aa8.95□□□□□ -0.98
TRAPPC13-212ENST00000520525 HS6ST3Q8IZP7 471 aa8.95□□□□□ -0.98
TRAPPC13-212ENST00000520525 PSDA5PKW4 1024 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC13-212ENST00000520525 PPP1R37O75864 691 aa8.92□□□□□ -0.98
TRAPPC13-212ENST00000520525 CHGAP10645 457 aaKnown RBP8.91□□□□□ -0.98
TRAPPC13-212ENST00000520525 TK2O00142 265 aa8.9□□□□□ -0.98
TRAPPC13-212ENST00000520525 HRO43593 1189 aa8.89□□□□□ -0.99
TRAPPC13-212ENST00000520525 DMRTA1Q5VZB9 504 aa8.89□□□□□ -0.99
TRAPPC13-212ENST00000520525 PTCD2Q8WV60 388 aaKnown RBP8.89□□□□□ -0.99
TRAPPC13-212ENST00000520525 DNAJC5Q9H3Z4 198 aa8.88□□□□□ -0.99
TRAPPC13-212ENST00000520525 PSEN2P49810 448 aa8.87□□□□□ -0.99
TRAPPC13-212ENST00000520525 NKX1-1Q15270 411 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC13-212ENST00000520525 FOXK1P85037 733 aa8.83□□□□□ -1
TRAPPC13-212ENST00000520525 PLPP6Q8IY26 295 aa8.83□□□□□ -1
TRAPPC13-212ENST00000520525 AMER1Q5JTC6 1135 aaPredicted RBP8.81□□□□□ -1
TRAPPC13-212ENST00000520525 PPP4R3BQ5MIZ7 849 aa8.81□□□□□ -1
TRAPPC13-212ENST00000520525 KCTD12Q96CX2 325 aaKnown RBP8.81□□□□□ -1
TRAPPC13-212ENST00000520525 GPHNQ9NQX3 736 aaPredicted RBP8.81□□□□□ -1
TRAPPC13-212ENST00000520525 RTN4Q9NQC3 1192 aaKnown RBP8.8□□□□□ -1
TRAPPC13-212ENST00000520525 DSG2Q14126 1118 aa8.79□□□□□ -1
TRAPPC13-212ENST00000520525 TBC1D12O60347 775 aa8.78□□□□□ -1
TRAPPC13-212ENST00000520525 DCAF8L2P0C7V8 631 aa8.77□□□□□ -1.01
TRAPPC13-212ENST00000520525 STAC3Q96MF2 364 aa8.77□□□□□ -1.01
TRAPPC13-212ENST00000520525 KCNK17Q96T54 332 aa8.76□□□□□ -1.01
TRAPPC13-212ENST00000520525 VPS9D1Q9Y2B5 631 aa8.76□□□□□ -1.01
TRAPPC13-212ENST00000520525 GTPBP6O43824 516 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC13-212ENST00000520525 PTPN5P54829 565 aa8.72□□□□□ -1.01
TRAPPC13-212ENST00000520525 OXER1Q8TDS5 423 aa8.72□□□□□ -1.01
TRAPPC13-212ENST00000520525 KCNH8Q96L42 1107 aa8.72□□□□□ -1.01
TRAPPC13-212ENST00000520525 SLC4A5Q9BY07 1137 aa8.71□□□□□ -1.02
TRAPPC13-212ENST00000520525 RYDENQ9NUL5 291 aaKnown RBP8.71□□□□□ -1.02
TRAPPC13-212ENST00000520525 BHMG1C9JSJ3 638 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC13-212ENST00000520525 IFFO2Q5TF58 517 aa8.69□□□□□ -1.02
TRAPPC13-212ENST00000520525 BCL2L12Q9HB09 334 aa8.69□□□□□ -1.02
TRAPPC13-212ENST00000520525 RGS20O76081 388 aa8.68□□□□□ -1.02
TRAPPC13-212ENST00000520525 ZNF454Q8N9F8 522 aa8.68□□□□□ -1.02
TRAPPC13-212ENST00000520525 UPF1Q92900 1129 aaKnown RBP eCLIP8.67□□□□□ -1.02
TRAPPC13-212ENST00000520525 THSD4Q6ZMP0 1018 aa8.66□□□□□ -1.02
TRAPPC13-212ENST00000520525 FOSBP53539 338 aa8.65□□□□□ -1.02
TRAPPC13-212ENST00000520525 ZBED2Q9BTP6 218 aa8.64□□□□□ -1.03
TRAPPC13-212ENST00000520525 CRISPLD2Q9H0B8 497 aa8.64□□□□□ -1.03
TRAPPC13-212ENST00000520525 PTPREP23469 700 aa8.63□□□□□ -1.03
TRAPPC13-212ENST00000520525 ANO8Q9HCE9 1232 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC13-212ENST00000520525 NCKAP5LQ9HCH0 1330 aa8.61□□□□□ -1.03
TRAPPC13-212ENST00000520525 A0A0G2JS52 829 aa8.61□□□□□ -1.03
TRAPPC13-212ENST00000520525 BBXQ8WY36 941 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC13-212ENST00000520525 WNT2BQ93097 391 aa8.61□□□□□ -1.03
TRAPPC13-212ENST00000520525 IRX2Q9BZI1 471 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC13-212ENST00000520525 GOLGA8CPA6NN73 597 aa8.6□□□□□ -1.03
TRAPPC13-212ENST00000520525 PPP1R15BQ5SWA1 713 aa8.6□□□□□ -1.03
TRAPPC13-212ENST00000520525 MRPL50Q8N5N7 158 aaKnown RBP8.6□□□□□ -1.03
TRAPPC13-212ENST00000520525 JPH4Q96JJ6 628 aa8.58□□□□□ -1.04
TRAPPC13-212ENST00000520525 ADAM33Q9BZ11 813 aa8.58□□□□□ -1.04
TRAPPC13-212ENST00000520525 CADPS2Q86UW7 1296 aa8.57□□□□□ -1.04
TRAPPC13-212ENST00000520525 ZDHHC16Q969W1 377 aa8.57□□□□□ -1.04
TRAPPC13-212ENST00000520525 EVI5O60447 810 aa8.56□□□□□ -1.04
TRAPPC13-212ENST00000520525 PDE4AP27815 886 aa8.55□□□□□ -1.04
TRAPPC13-212ENST00000520525 NBPF3Q9H094 633 aa8.55□□□□□ -1.04
TRAPPC13-212ENST00000520525 MFSD10Q14728 455 aa8.53□□□□□ -1.04
TRAPPC13-212ENST00000520525 LARP6Q9BRS8 491 aaKnown RBP8.51□□□□□ -1.05
TRAPPC13-212ENST00000520525 DDX27Q96GQ7 796 aaKnown RBP8.5□□□□□ -1.05
TRAPPC13-212ENST00000520525 RABGEF1Q9UJ41 708 aa8.5□□□□□ -1.05
TRAPPC13-212ENST00000520525 ITGBL1O95965 494 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC13-212ENST00000520525 PROX2Q3B8N5 592 aa8.49□□□□□ -1.05
TRAPPC13-212ENST00000520525 SPRYD3Q8NCJ5 442 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms