RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 KIF3CO14782 793 aa13.75□□□□□ -0.21
LINC00535-204ENST00000520513 C2orf72A6NCS6 295 aa13.72□□□□□ -0.21
LINC00535-204ENST00000520513 AMER1Q5JTC6 1135 aaPredicted RBP13.72□□□□□ -0.21
LINC00535-204ENST00000520513 GTPBP6O43824 516 aaPredicted RBP13.7□□□□□ -0.22
LINC00535-204ENST00000520513 POTEB3A0JP26 581 aa13.68□□□□□ -0.22
LINC00535-204ENST00000520513 POTEBQ6S5H4 581 aa13.68□□□□□ -0.22
LINC00535-204ENST00000520513 DOK7Q18PE1 504 aa13.67□□□□□ -0.22
LINC00535-204ENST00000520513 ZNF710Q8N1W2 664 aa13.62□□□□□ -0.23
LINC00535-204ENST00000520513 RIMBP2O15034 1052 aa13.61□□□□□ -0.23
LINC00535-204ENST00000520513 HOXB1P14653 301 aaPredicted RBP13.61□□□□□ -0.23
LINC00535-204ENST00000520513 EMP3P54852 163 aa13.61□□□□□ -0.23
LINC00535-204ENST00000520513 CDAN1Q8IWY9 1227 aa13.61□□□□□ -0.23
LINC00535-204ENST00000520513 GPR153Q6NV75 609 aa13.6□□□□□ -0.23
LINC00535-204ENST00000520513 KHSRPQ92945 711 aaKnown RBP eCLIP13.58□□□□□ -0.24
LINC00535-204ENST00000520513 PLSCR2Q9NRY7 297 aa13.58□□□□□ -0.24
LINC00535-204ENST00000520513 TMC2Q8TDI7 906 aa13.57□□□□□ -0.24
LINC00535-204ENST00000520513 ZSWIM6Q9HCJ5 1215 aa13.57□□□□□ -0.24
LINC00535-204ENST00000520513 FAM205CA6NFA0 338 aa13.56□□□□□ -0.24
LINC00535-204ENST00000520513 RYDENQ9NUL5 291 aaKnown RBP13.56□□□□□ -0.24
LINC00535-204ENST00000520513 HS3ST6Q96QI5 342 aa13.55□□□□□ -0.24
LINC00535-204ENST00000520513 ARSIQ5FYB1 569 aa13.54□□□□□ -0.24
LINC00535-204ENST00000520513 GPHNQ9NQX3 736 aaPredicted RBP13.53□□□□□ -0.24
LINC00535-204ENST00000520513 DSG2Q14126 1118 aa13.52□□□□□ -0.25
LINC00535-204ENST00000520513 NCKAP5LQ9HCH0 1330 aa13.51□□□□□ -0.25
LINC00535-204ENST00000520513 FOXK1P85037 733 aa13.5□□□□□ -0.25
LINC00535-204ENST00000520513 CRISPLD2Q9H0B8 497 aa13.5□□□□□ -0.25
LINC00535-204ENST00000520513 CADPS2Q86UW7 1296 aa13.48□□□□□ -0.25
LINC00535-204ENST00000520513 PLPP6Q8IY26 295 aa13.48□□□□□ -0.25
LINC00535-204ENST00000520513 BBXQ8WY36 941 aaPredicted RBP13.48□□□□□ -0.25
LINC00535-204ENST00000520513 SLC34A2O95436 690 aa13.47□□□□□ -0.25
LINC00535-204ENST00000520513 KRTAP3-3Q9BYR6 98 aa13.45□□□□□ -0.26
LINC00535-204ENST00000520513 KRTAP3-2Q9BYR7 98 aa13.45□□□□□ -0.26
LINC00535-204ENST00000520513 PCDHGA4Q9Y5G9 962 aa13.45□□□□□ -0.26
LINC00535-204ENST00000520513 ERBB3P21860 1342 aa13.44□□□□□ -0.26
LINC00535-204ENST00000520513 NUDT7P0C024 238 aa13.42□□□□□ -0.26
LINC00535-204ENST00000520513 VARS2Q5ST30 1063 aaKnown RBP13.42□□□□□ -0.26
LINC00535-204ENST00000520513 KDM4FA0A1W2PPD8 638 aa13.4□□□□□ -0.26
LINC00535-204ENST00000520513 PTCD2Q8WV60 388 aaKnown RBP13.38□□□□□ -0.27
LINC00535-204ENST00000520513 PPP1R15BQ5SWA1 713 aa13.37□□□□□ -0.27
LINC00535-204ENST00000520513 ZNF316A6NFI3 1004 aaPredicted RBP13.36□□□□□ -0.27
LINC00535-204ENST00000520513 LARP6Q9BRS8 491 aaKnown RBP13.35□□□□□ -0.27
LINC00535-204ENST00000520513 PDE4AP27815 886 aa13.34□□□□□ -0.27
LINC00535-204ENST00000520513 LHX6Q9UPM6 363 aa13.34□□□□□ -0.27
LINC00535-204ENST00000520513 MFSD10Q14728 455 aa13.33□□□□□ -0.28
LINC00535-204ENST00000520513 OXER1Q8TDS5 423 aa13.32□□□□□ -0.28
LINC00535-204ENST00000520513 SPNS2Q8IVW8 549 aa13.3□□□□□ -0.28
LINC00535-204ENST00000520513 ZNF687Q8N1G0 1237 aa13.3□□□□□ -0.28
LINC00535-204ENST00000520513 SPRYD3Q8NCJ5 442 aa13.3□□□□□ -0.28
LINC00535-204ENST00000520513 UPF1Q92900 1129 aaKnown RBP eCLIP13.3□□□□□ -0.28
LINC00535-204ENST00000520513 POTEEQ6S8J3 1075 aa13.28□□□□□ -0.28
LINC00535-204ENST00000520513 PAXIP1Q6ZW49 1069 aaPredicted RBP13.28□□□□□ -0.28
LINC00535-204ENST00000520513 DDX27Q96GQ7 796 aaKnown RBP13.28□□□□□ -0.28
LINC00535-204ENST00000520513 CFAP44Q96MT7 982 aa13.26□□□□□ -0.29
LINC00535-204ENST00000520513 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.26□□□□□ -0.29
LINC00535-204ENST00000520513 EMILIN3Q9NT22 766 aa13.25□□□□□ -0.29
LINC00535-204ENST00000520513 MMRN1Q13201 1228 aa13.2□□□□□ -0.3
LINC00535-204ENST00000520513 TBC1D12O60347 775 aa13.18□□□□□ -0.3
LINC00535-204ENST00000520513 AXIN2Q9Y2T1 843 aa13.18□□□□□ -0.3
LINC00535-204ENST00000520513 PSDA5PKW4 1024 aaPredicted RBP13.16□□□□□ -0.3
LINC00535-204ENST00000520513 CAMK2BQ13554 666 aa13.15□□□□□ -0.3
LINC00535-204ENST00000520513 PBX2P40425 430 aa13.13□□□□□ -0.31
LINC00535-204ENST00000520513 EVI5O60447 810 aa13.12□□□□□ -0.31
LINC00535-204ENST00000520513 ANO8Q9HCE9 1232 aaPredicted RBP13.12□□□□□ -0.31
LINC00535-204ENST00000520513 LSM11P83369 360 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC00535-204ENST00000520513 PSEN2P49810 448 aa13.08□□□□□ -0.32
LINC00535-204ENST00000520513 TSHZ2Q9NRE2 1034 aa13.08□□□□□ -0.32
LINC00535-204ENST00000520513 MAP3K9P80192 1104 aa13.07□□□□□ -0.32
LINC00535-204ENST00000520513 ANKRD13DQ6ZTN6 518 aa13.07□□□□□ -0.32
LINC00535-204ENST00000520513 FOSBP53539 338 aa13.06□□□□□ -0.32
LINC00535-204ENST00000520513 DMRTA1Q5VZB9 504 aa13.06□□□□□ -0.32
LINC00535-204ENST00000520513 DPYSL4O14531 572 aa13.05□□□□□ -0.32
LINC00535-204ENST00000520513 PTGER2P43116 358 aa13.05□□□□□ -0.32
LINC00535-204ENST00000520513 PPP4R3BQ5MIZ7 849 aa13.05□□□□□ -0.32
LINC00535-204ENST00000520513 ZNF454Q8N9F8 522 aa13.05□□□□□ -0.32
LINC00535-204ENST00000520513 ARHGAP33O14559 1287 aa13.04□□□□□ -0.32
LINC00535-204ENST00000520513 JPH4Q96JJ6 628 aa13□□□□□ -0.33
LINC00535-204ENST00000520513 KCNK17Q96T54 332 aa12.98□□□□□ -0.33
LINC00535-204ENST00000520513 ADAM33Q9BZ11 813 aa12.98□□□□□ -0.33
LINC00535-204ENST00000520513 MYT1LQ9UL68 1186 aa12.98□□□□□ -0.33
LINC00535-204ENST00000520513 PCDHGA10Q9Y5H3 936 aa12.98□□□□□ -0.33
LINC00535-204ENST00000520513 RNF166Q96A37 237 aaPredicted RBP12.97□□□□□ -0.33
LINC00535-204ENST00000520513 BCL2L12Q9HB09 334 aa12.97□□□□□ -0.33
LINC00535-204ENST00000520513 ADGRD1Q6QNK2 874 aa12.95□□□□□ -0.34
LINC00535-204ENST00000520513 E2F4Q16254 413 aa12.94□□□□□ -0.34
LINC00535-204ENST00000520513 ZDHHC16Q969W1 377 aa12.93□□□□□ -0.34
LINC00535-204ENST00000520513 KCNH8Q96L42 1107 aa12.92□□□□□ -0.34
LINC00535-204ENST00000520513 HRO43593 1189 aa12.91□□□□□ -0.34
LINC00535-204ENST00000520513 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
LINC00535-204ENST00000520513 TK2O00142 265 aa12.9□□□□□ -0.34
LINC00535-204ENST00000520513 PDIA6Q15084 440 aa12.9□□□□□ -0.34
LINC00535-204ENST00000520513 DDX12PQ92771 950 aa12.89□□□□□ -0.35
LINC00535-204ENST00000520513 WDR70Q9NW82 654 aa12.89□□□□□ -0.35
LINC00535-204ENST00000520513 PHF14O94880 888 aa12.88□□□□□ -0.35
LINC00535-204ENST00000520513 PLCB2Q00722 1185 aa12.88□□□□□ -0.35
LINC00535-204ENST00000520513 ARIH1Q9Y4X5 557 aaPredicted RBP12.88□□□□□ -0.35
LINC00535-204ENST00000520513 VPS9D1Q9Y2B5 631 aa12.87□□□□□ -0.35
LINC00535-204ENST00000520513 COL9A1P20849 921 aa12.86□□□□□ -0.35
LINC00535-204ENST00000520513 PTPREP23469 700 aa12.86□□□□□ -0.35
LINC00535-204ENST00000520513 PRIM1P49642 420 aaKnown RBP12.85□□□□□ -0.35
LINC00535-204ENST00000520513 TYW1BQ6NUM6 668 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms