RNA–Protein interactions for RNA: ENST00000520199.5

CLK4-205, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-205ENST00000520199 SCAPERQ9BY12 1400 aa25.45■■□□□ 1.66
CLK4-205ENST00000520199 CDK11AQ9UQ88 783 aaPredicted RBP25.43■■□□□ 1.66
CLK4-205ENST00000520199 POGZQ7Z3K3 1410 aa25.43■■□□□ 1.66
CLK4-205ENST00000520199 CCDC18Q5T9S5 1454 aa25.42■■□□□ 1.66
CLK4-205ENST00000520199 CDC42BPAQ5VT25 1732 aa25.42■■□□□ 1.66
CLK4-205ENST00000520199 HECW2Q9P2P5 1572 aa25.41■■□□□ 1.66
CLK4-205ENST00000520199 MADDQ8WXG6 1647 aa25.4■■□□□ 1.66
CLK4-205ENST00000520199 PREX2Q70Z35 1606 aa25.39■■□□□ 1.66
CLK4-205ENST00000520199 ZFYVE16Q7Z3T8 1539 aa25.38■■□□□ 1.65
CLK4-205ENST00000520199 EFCAB2Q5VUJ9 269 aa25.38■■□□□ 1.65
CLK4-205ENST00000520199 ARHGAP5Q13017 1502 aa25.37■■□□□ 1.65
CLK4-205ENST00000520199 ARHGEF12Q9NZN5 1544 aa25.37■■□□□ 1.65
CLK4-205ENST00000520199 PTPRMP28827 1452 aa25.36■■□□□ 1.65
CLK4-205ENST00000520199 MAGI2Q86UL8 1455 aa25.35■■□□□ 1.65
CLK4-205ENST00000520199 KDM5CP41229 1560 aa25.34■■□□□ 1.65
CLK4-205ENST00000520199 AFAP1Q8N556 730 aa25.31■■□□□ 1.64
CLK4-205ENST00000520199 CEP162Q5TB80 1403 aa25.3■■□□□ 1.64
CLK4-205ENST00000520199 RIMS1Q86UR5 1692 aaKnown RBP25.3■■□□□ 1.64
CLK4-205ENST00000520199 ABCC1P33527 1531 aa25.29■■□□□ 1.64
CLK4-205ENST00000520199 ITSN2Q9NZM3 1697 aa25.29■■□□□ 1.64
CLK4-205ENST00000520199 ARID4BQ4LE39 1312 aaPredicted RBP25.28■■□□□ 1.64
CLK4-205ENST00000520199 TRAPPC8Q9Y2L5 1435 aa25.28■■□□□ 1.64
CLK4-205ENST00000520199 LOC105371045A0A1W2PR82 267 aa25.27■■□□□ 1.64
CLK4-205ENST00000520199 ZNF518AQ6AHZ1 1483 aa25.26■■□□□ 1.63
CLK4-205ENST00000520199 GPATCH8Q9UKJ3 1502 aaKnown RBP25.26■■□□□ 1.63
CLK4-205ENST00000520199 ATP10AO60312 1499 aa25.25■■□□□ 1.63
CLK4-205ENST00000520199 SAMD9LQ8IVG5 1584 aa25.24■■□□□ 1.63
CLK4-205ENST00000520199 ABCA6Q8N139 1617 aa25.23■■□□□ 1.63
CLK4-205ENST00000520199 DIP2CQ9Y2E4 1556 aa25.23■■□□□ 1.63
CLK4-205ENST00000520199 KIDINS220Q9ULH0 1771 aa25.22■■□□□ 1.63
CLK4-205ENST00000520199 FER1L4A9Z1Z3 1794 aa25.21■■□□□ 1.63
CLK4-205ENST00000520199 C9orf84Q5VXU9 1444 aa25.2■■□□□ 1.62
CLK4-205ENST00000520199 MLH3Q9UHC1 1453 aa25.19■■□□□ 1.62
CLK4-205ENST00000520199 REREQ9P2R6 1566 aa25.15■■□□□ 1.62
CLK4-205ENST00000520199 MLECQ14165 292 aa25.15■■□□□ 1.62
CLK4-205ENST00000520199 LMTK3Q96Q04 1460 aa25.14■■□□□ 1.61
CLK4-205ENST00000520199 TIAM1Q13009 1591 aa25.14■■□□□ 1.61
CLK4-205ENST00000520199 SYCP2Q9BX26 1530 aa25.13■■□□□ 1.61
CLK4-205ENST00000520199 MTUS2Q5JR59 1369 aa25.1■■□□□ 1.61
CLK4-205ENST00000520199 EHBP1L1Q8N3D4 1523 aa25.09■■□□□ 1.61
CLK4-205ENST00000520199 HNRNPMP52272 730 aaKnown RBP eCLIP25.09■■□□□ 1.61
CLK4-205ENST00000520199 ZNF777Q9ULD5 760 aaPredicted RBP25.08■■□□□ 1.61
CLK4-205ENST00000520199 ZNF644Q9H582 1327 aaPredicted RBP25.07■■□□□ 1.6
CLK4-205ENST00000520199 AGLP35573 1532 aa25.06■■□□□ 1.6
CLK4-205ENST00000520199 CCNB3Q8WWL7 1395 aa25.05■■□□□ 1.6
CLK4-205ENST00000520199 KIAA1107Q9UPP5 1409 aa25.05■■□□□ 1.6
CLK4-205ENST00000520199 INO80Q9ULG1 1556 aaPredicted RBP25.04■■□□□ 1.6
CLK4-205ENST00000520199 CFDP1Q9UEE9 299 aaPredicted RBP25.03■■□□□ 1.6
CLK4-205ENST00000520199 MBD5Q9P267 1494 aa25.02■■□□□ 1.6
CLK4-205ENST00000520199 CEBPAP49715 358 aaPredicted RBP25.01■■□□□ 1.59
CLK4-205ENST00000520199 PLPPR3Q6T4P5 718 aa25.01■■□□□ 1.59
CLK4-205ENST00000520199 VPS8Q8N3P4 1428 aa25.01■■□□□ 1.59
CLK4-205ENST00000520199 C3P01024 1663 aa24.99■■□□□ 1.59
CLK4-205ENST00000520199 NCOA2Q15596 1464 aa24.99■■□□□ 1.59
CLK4-205ENST00000520199 SUPT6HQ7KZ85 1726 aaKnown RBP24.98■■□□□ 1.59
CLK4-205ENST00000520199 ATP7AQ04656 1500 aa24.98■■□□□ 1.59
CLK4-205ENST00000520199 MYT1LQ9UL68 1186 aa24.98■■□□□ 1.59
CLK4-205ENST00000520199 PLXNC1O60486 1568 aa24.97■■□□□ 1.59
CLK4-205ENST00000520199 PLEKHH2Q8IVE3 1493 aa24.96■■□□□ 1.59
CLK4-205ENST00000520199 HSPA2P54652 639 aa24.96■■□□□ 1.59
CLK4-205ENST00000520199 SETD1BQ9UPS6 1966 aaKnown RBP24.96■■□□□ 1.59
CLK4-205ENST00000520199 SPAG9O60271 1321 aaKnown RBP24.95■■□□□ 1.58
CLK4-205ENST00000520199 PREX1Q8TCU6 1659 aa24.93■■□□□ 1.58
CLK4-205ENST00000520199 LRRC9Q6ZRR7 1453 aa24.92■■□□□ 1.58
CLK4-205ENST00000520199 KANK4Q5T7N3 995 aaPredicted RBP24.92■■□□□ 1.58
CLK4-205ENST00000520199 ILDR1Q86SU0 546 aaPredicted RBP24.92■■□□□ 1.58
CLK4-205ENST00000520199 ADGBQ8N7X0 1667 aa24.89■■□□□ 1.58
CLK4-205ENST00000520199 MAP3K1Q13233 1512 aa24.87■■□□□ 1.57
CLK4-205ENST00000520199 A2MP01023 1474 aa24.87■■□□□ 1.57
CLK4-205ENST00000520199 CAMSAP2Q08AD1 1489 aa24.87■■□□□ 1.57
CLK4-205ENST00000520199 STRCQ7RTU9 1775 aa24.87■■□□□ 1.57
CLK4-205ENST00000520199 MROH2AA6NES4 1674 aa24.84■■□□□ 1.57
CLK4-205ENST00000520199 CLTCQ00610 1675 aaKnown RBP24.82■■□□□ 1.56
CLK4-205ENST00000520199 RTEL1-TNFRSF6BF6WH68 1400 aa24.81■■□□□ 1.56
CLK4-205ENST00000520199 ARHGEF5Q12774 1597 aa24.79■■□□□ 1.56
CLK4-205ENST00000520199 CCDC141Q6ZP82 1450 aa24.78■■□□□ 1.56
CLK4-205ENST00000520199 CNTLNQ9NXG0 1405 aa24.77■■□□□ 1.56
CLK4-205ENST00000520199 ZMYM3Q14202 1370 aa24.75■■□□□ 1.55
CLK4-205ENST00000520199 DHX29Q7Z478 1369 aaKnown RBP24.73■■□□□ 1.55
CLK4-205ENST00000520199 UHRF1BP1Q6BDS2 1440 aa24.72■■□□□ 1.55
CLK4-205ENST00000520199 MYOM3Q5VTT5 1437 aa24.7■■□□□ 1.55
CLK4-205ENST00000520199 GGT6Q6P531 493 aa24.7■■□□□ 1.54
CLK4-205ENST00000520199 NPATQ14207 1427 aa24.69■■□□□ 1.54
CLK4-205ENST00000520199 PTPRKQ15262 1439 aa24.69■■□□□ 1.54
CLK4-205ENST00000520199 MAST1Q9Y2H9 1570 aa24.68■■□□□ 1.54
CLK4-205ENST00000520199 RSPH4AQ5TD94 716 aa24.67■■□□□ 1.54
CLK4-205ENST00000520199 ESF1Q9H501 851 aaKnown RBP24.66■■□□□ 1.54
CLK4-205ENST00000520199 MIA2Q96PC5 1412 aa24.66■■□□□ 1.54
CLK4-205ENST00000520199 MYO3AQ8NEV4 1616 aa24.63■■□□□ 1.53
CLK4-205ENST00000520199 ZNF142P52746 1687 aaPredicted RBP24.62■■□□□ 1.53
CLK4-205ENST00000520199 KIF3BO15066 747 aa24.62■■□□□ 1.53
CLK4-205ENST00000520199 PPP6R1Q9UPN7 881 aa24.61■■□□□ 1.53
CLK4-205ENST00000520199 CROCC2H7BZ55 1655 aa24.6■■□□□ 1.53
CLK4-205ENST00000520199 PTPN23Q9H3S7 1636 aa24.6■■□□□ 1.53
CLK4-205ENST00000520199 MROH1Q8NDA8 1641 aa24.59■■□□□ 1.53
CLK4-205ENST00000520199 NCOA1Q15788 1441 aa24.59■■□□□ 1.53
CLK4-205ENST00000520199 RNF17Q9BXT8 1623 aaKnown RBP24.58■■□□□ 1.53
CLK4-205ENST00000520199 FBXO41Q8TF61 875 aa24.58■■□□□ 1.53
CLK4-205ENST00000520199 CAMSAP1Q5T5Y3 1602 aa24.57■■□□□ 1.52
CLK4-205ENST00000520199 ABCC5O15440 1437 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms