RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 CFDP1Q9UEE9 299 aaPredicted RBP21.94■■□□□ 1.1
VPS37A-206ENST00000520140 ITSN2Q9NZM3 1697 aa21.94■■□□□ 1.1
VPS37A-206ENST00000520140 MYOM3Q5VTT5 1437 aa21.92■■□□□ 1.1
VPS37A-206ENST00000520140 FANCAO15360 1455 aa21.91■■□□□ 1.1
VPS37A-206ENST00000520140 ZNF644Q9H582 1327 aaPredicted RBP21.9■■□□□ 1.1
VPS37A-206ENST00000520140 EFCAB2Q5VUJ9 269 aa21.88■■□□□ 1.09
VPS37A-206ENST00000520140 FGD6Q6ZV73 1430 aa21.85■■□□□ 1.09
VPS37A-206ENST00000520140 TEX14Q8IWB6 1497 aa21.85■■□□□ 1.09
VPS37A-206ENST00000520140 SAMD9LQ8IVG5 1584 aa21.84■■□□□ 1.09
VPS37A-206ENST00000520140 ARAP3Q8WWN8 1544 aa21.84■■□□□ 1.09
VPS37A-206ENST00000520140 FAM50AQ14320 339 aaKnown RBP21.83■■□□□ 1.08
VPS37A-206ENST00000520140 AKNAQ7Z591 1439 aa21.83■■□□□ 1.08
VPS37A-206ENST00000520140 PTPN23Q9H3S7 1636 aa21.82■■□□□ 1.08
VPS37A-206ENST00000520140 MIA2Q96PC5 1412 aa21.81■■□□□ 1.08
VPS37A-206ENST00000520140 CAMSAP2Q08AD1 1489 aa21.81■■□□□ 1.08
VPS37A-206ENST00000520140 CFAP74Q9C0B2 1584 aa21.81■■□□□ 1.08
VPS37A-206ENST00000520140 HNRNPMP52272 730 aaKnown RBP eCLIP21.8■■□□□ 1.086e-7■■■■■ 30.1
VPS37A-206ENST00000520140 ADGRL1O94910 1474 aa21.8■■□□□ 1.08
VPS37A-206ENST00000520140 NEO1Q92859 1461 aa21.8■■□□□ 1.08
VPS37A-206ENST00000520140 SYCP2Q9BX26 1530 aa21.78■■□□□ 1.08
VPS37A-206ENST00000520140 SCAPERQ9BY12 1400 aa21.77■■□□□ 1.08
VPS37A-206ENST00000520140 ARHGEF12Q9NZN5 1544 aa21.77■■□□□ 1.07
VPS37A-206ENST00000520140 RAPGEF3O95398 923 aa21.76■■□□□ 1.07
VPS37A-206ENST00000520140 ABCC1P33527 1531 aa21.76■■□□□ 1.07
VPS37A-206ENST00000520140 ITGAEP38570 1179 aa21.75■■□□□ 1.07
VPS37A-206ENST00000520140 COL17A1Q9UMD9 1497 aaPredicted RBP21.74■■□□□ 1.07
VPS37A-206ENST00000520140 RRBP1Q9P2E9 1410 aaKnown RBP21.73■■□□□ 1.07
VPS37A-206ENST00000520140 AFAP1Q8N556 730 aa21.73■■□□□ 1.07
VPS37A-206ENST00000520140 TCOF1Q13428 1488 aaKnown RBP21.72■■□□□ 1.07
VPS37A-206ENST00000520140 TRAPPC8Q9Y2L5 1435 aa21.72■■□□□ 1.07
VPS37A-206ENST00000520140 KDM6BO15054 1643 aa21.7■■□□□ 1.06
VPS37A-206ENST00000520140 PLEKHH2Q8IVE3 1493 aa21.7■■□□□ 1.06
VPS37A-206ENST00000520140 DENND4BO75064 1496 aaPredicted RBP21.69■■□□□ 1.06
VPS37A-206ENST00000520140 MBD5Q9P267 1494 aa21.69■■□□□ 1.06
VPS37A-206ENST00000520140 KIAA1107Q9UPP5 1409 aa21.69■■□□□ 1.06
VPS37A-206ENST00000520140 MYT1LQ9UL68 1186 aa21.67■■□□□ 1.06
VPS37A-206ENST00000520140 RICTORQ6R327 1708 aa21.67■■□□□ 1.06
VPS37A-206ENST00000520140 POGZQ7Z3K3 1410 aa21.67■■□□□ 1.06
VPS37A-206ENST00000520140 FRMPD1Q5SYB0 1578 aa21.65■■□□□ 1.06
VPS37A-206ENST00000520140 CHIC2Q9UKJ5 165 aa21.65■■□□□ 1.06
VPS37A-206ENST00000520140 ZNF518AQ6AHZ1 1483 aa21.64■■□□□ 1.06
VPS37A-206ENST00000520140 CCDC141Q6ZP82 1450 aa21.64■■□□□ 1.06
VPS37A-206ENST00000520140 DNMT1P26358 1616 aaKnown RBP21.64■■□□□ 1.05
VPS37A-206ENST00000520140 DAPK1P53355 1430 aa21.63■■□□□ 1.05
VPS37A-206ENST00000520140 ABCC5O15440 1437 aa21.63■■□□□ 1.05
VPS37A-206ENST00000520140 ARHGEF5Q12774 1597 aa21.63■■□□□ 1.05
VPS37A-206ENST00000520140 TSPY4P0CV99 314 aa21.61■■□□□ 1.05
VPS37A-206ENST00000520140 TSPY10P0CW01 314 aa21.61■■□□□ 1.05
VPS37A-206ENST00000520140 SPAG9O60271 1321 aaKnown RBP21.6■■□□□ 1.05
VPS37A-206ENST00000520140 CROCC2H7BZ55 1655 aa21.6■■□□□ 1.05
VPS37A-206ENST00000520140 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.6■■□□□ 1.05
VPS37A-206ENST00000520140 PTPRKQ15262 1439 aa21.6■■□□□ 1.05
VPS37A-206ENST00000520140 RSPH4AQ5TD94 716 aa21.59■■□□□ 1.05
VPS37A-206ENST00000520140 KDM5CP41229 1560 aa21.59■■□□□ 1.05
VPS37A-206ENST00000520140 C9orf84Q5VXU9 1444 aa21.56■■□□□ 1.04
VPS37A-206ENST00000520140 TRIM26Q12899 539 aaPredicted RBP21.56■■□□□ 1.04
VPS37A-206ENST00000520140 HECW2Q9P2P5 1572 aa21.56■■□□□ 1.04
VPS37A-206ENST00000520140 KIDINS220Q9ULH0 1771 aa21.55■■□□□ 1.04
VPS37A-206ENST00000520140 ATP7AQ04656 1500 aa21.54■■□□□ 1.04
VPS37A-206ENST00000520140 YEATS2Q9ULM3 1422 aa21.54■■□□□ 1.04
VPS37A-206ENST00000520140 ZFYVE16Q7Z3T8 1539 aa21.54■■□□□ 1.04
VPS37A-206ENST00000520140 INO80Q9ULG1 1556 aaPredicted RBP21.53■■□□□ 1.04
VPS37A-206ENST00000520140 ZMYM4Q5VZL5 1548 aa21.53■■□□□ 1.04
VPS37A-206ENST00000520140 RRP7BPQ9NSQ0 103 aa21.52■■□□□ 1.04
VPS37A-206ENST00000520140 MLH3Q9UHC1 1453 aa21.51■■□□□ 1.03
VPS37A-206ENST00000520140 SHANK2Q9UPX8 1470 aa21.5■■□□□ 1.03
VPS37A-206ENST00000520140 ABCA6Q8N139 1617 aa21.49■■□□□ 1.03
VPS37A-206ENST00000520140 ADGBQ8N7X0 1667 aa21.49■■□□□ 1.03
VPS37A-206ENST00000520140 MAST1Q9Y2H9 1570 aa21.49■■□□□ 1.03
VPS37A-206ENST00000520140 RTEL1-TNFRSF6BF6WH68 1400 aa21.47■■□□□ 1.03
VPS37A-206ENST00000520140 ANKRD30AQ9BXX3 1397 aa21.46■■□□□ 1.03
VPS37A-206ENST00000520140 PCGF6Q9BYE7 350 aa21.46■■□□□ 1.03
VPS37A-206ENST00000520140 DIP2CQ9Y2E4 1556 aa21.46■■□□□ 1.03
VPS37A-206ENST00000520140 NCOA1Q15788 1441 aa21.46■■□□□ 1.03
VPS37A-206ENST00000520140 MAGI2Q86UL8 1455 aa21.46■■□□□ 1.03
VPS37A-206ENST00000520140 KIF15Q9NS87 1388 aa21.44■■□□□ 1.02
VPS37A-206ENST00000520140 ARHGEF40Q8TER5 1519 aa21.44■■□□□ 1.02
VPS37A-206ENST00000520140 PLXNC1O60486 1568 aa21.43■■□□□ 1.02
VPS37A-206ENST00000520140 ADGRL2O95490 1459 aa21.43■■□□□ 1.02
VPS37A-206ENST00000520140 ATP10AO60312 1499 aa21.4■■□□□ 1.02
VPS37A-206ENST00000520140 ROCK1Q13464 1354 aa21.4■■□□□ 1.02
VPS37A-206ENST00000520140 SIGLEC1Q9BZZ2 1709 aa21.39■■□□□ 1.02
VPS37A-206ENST00000520140 A2MP01023 1474 aa21.38■■□□□ 1.01
VPS37A-206ENST00000520140 ARID4BQ4LE39 1312 aaPredicted RBP21.37■■□□□ 1.01
VPS37A-206ENST00000520140 NAIPQ13075 1403 aa21.36■■□□□ 1.01
VPS37A-206ENST00000520140 DUOX2Q9NRD8 1548 aa21.36■■□□□ 1.01
VPS37A-206ENST00000520140 DHX29Q7Z478 1369 aaKnown RBP21.35■■□□□ 1.01
VPS37A-206ENST00000520140 HFM1A2PYH4 1435 aa21.34■■□□□ 1.01
VPS37A-206ENST00000520140 ANKRD50Q9ULJ7 1429 aa21.34■■□□□ 1.01
VPS37A-206ENST00000520140 GCC2Q8IWJ2 1684 aa21.34■■□□□ 1.01
VPS37A-206ENST00000520140 KIF3BO15066 747 aa21.34■■□□□ 1.01
VPS37A-206ENST00000520140 MLECQ14165 292 aa21.33■■□□□ 1.01
VPS37A-206ENST00000520140 GGT6Q6P531 493 aa21.29■■□□□ 1
VPS37A-206ENST00000520140 ERBINQ96RT1 1412 aa21.29■■□□□ 1
VPS37A-206ENST00000520140 SETD5Q9C0A6 1442 aa21.29■■□□□ 1
VPS37A-206ENST00000520140 REREQ9P2R6 1566 aa21.28■■□□□ 1
VPS37A-206ENST00000520140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.28■■□□□ 13e-6■■□□□ 13.8
VPS37A-206ENST00000520140 RAB3GAP2Q9H2M9 1393 aa21.26■□□□□ 0.99
VPS37A-206ENST00000520140 EIF2AK4Q9P2K8 1649 aaKnown RBP21.25■□□□□ 0.99
VPS37A-206ENST00000520140 AGLP35573 1532 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms