RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 CCNB3Q8WWL7 1395 aa26.93■■□□□ 1.9
CLK4-204ENST00000520126 KANK4Q5T7N3 995 aaPredicted RBP26.92■■□□□ 1.9
CLK4-204ENST00000520126 CFAP74Q9C0B2 1584 aa26.9■■□□□ 1.9
CLK4-204ENST00000520126 LRRC9Q6ZRR7 1453 aa26.88■■□□□ 1.89
CLK4-204ENST00000520126 ARAP3Q8WWN8 1544 aa26.87■■□□□ 1.89
CLK4-204ENST00000520126 CFDP1Q9UEE9 299 aaPredicted RBP26.87■■□□□ 1.89
CLK4-204ENST00000520126 ADGRL1O94910 1474 aa26.86■■□□□ 1.89
CLK4-204ENST00000520126 FOXD1Q16676 465 aa26.86■■□□□ 1.89
CLK4-204ENST00000520126 SCAPERQ9BY12 1400 aa26.85■■□□□ 1.89
CLK4-204ENST00000520126 DENND4BO75064 1496 aaPredicted RBP26.84■■□□□ 1.89
CLK4-204ENST00000520126 MAP3K1Q13233 1512 aa26.83■■□□□ 1.89
CLK4-204ENST00000520126 GPATCH8Q9UKJ3 1502 aaKnown RBP26.83■■□□□ 1.89
CLK4-204ENST00000520126 SUPT6HQ7KZ85 1726 aaKnown RBP26.83■■□□□ 1.89
CLK4-204ENST00000520126 MYT1LQ9UL68 1186 aa26.83■■□□□ 1.89
CLK4-204ENST00000520126 CDC42BPBQ9Y5S2 1711 aa26.83■■□□□ 1.89
CLK4-204ENST00000520126 PREX2Q70Z35 1606 aa26.82■■□□□ 1.88
CLK4-204ENST00000520126 NCOA2Q15596 1464 aa26.82■■□□□ 1.88
CLK4-204ENST00000520126 CDC42BPAQ5VT25 1732 aa26.81■■□□□ 1.88
CLK4-204ENST00000520126 PPARGC1BQ86YN6 1023 aaKnown RBP26.76■■□□□ 1.87
CLK4-204ENST00000520126 AFAP1Q8N556 730 aa26.74■■□□□ 1.87
CLK4-204ENST00000520126 HNRNPMP52272 730 aaKnown RBP eCLIP26.73■■□□□ 1.87
CLK4-204ENST00000520126 ZNF644Q9H582 1327 aaPredicted RBP26.71■■□□□ 1.87
CLK4-204ENST00000520126 POGZQ7Z3K3 1410 aa26.71■■□□□ 1.87
CLK4-204ENST00000520126 ITSN2Q9NZM3 1697 aa26.71■■□□□ 1.87
CLK4-204ENST00000520126 FRMPD1Q5SYB0 1578 aa26.7■■□□□ 1.87
CLK4-204ENST00000520126 RICTORQ6R327 1708 aa26.69■■□□□ 1.86
CLK4-204ENST00000520126 SAMD9LQ8IVG5 1584 aa26.68■■□□□ 1.86
CLK4-204ENST00000520126 ABCC1P33527 1531 aa26.66■■□□□ 1.86
CLK4-204ENST00000520126 ARHGEF12Q9NZN5 1544 aa26.65■■□□□ 1.86
CLK4-204ENST00000520126 ZNF518AQ6AHZ1 1483 aa26.65■■□□□ 1.86
CLK4-204ENST00000520126 TRAPPC8Q9Y2L5 1435 aa26.65■■□□□ 1.86
CLK4-204ENST00000520126 SYCP2Q9BX26 1530 aa26.65■■□□□ 1.86
CLK4-204ENST00000520126 ARID4BQ4LE39 1312 aaPredicted RBP26.64■■□□□ 1.86
CLK4-204ENST00000520126 PLEKHH2Q8IVE3 1493 aa26.63■■□□□ 1.85
CLK4-204ENST00000520126 MYOM3Q5VTT5 1437 aa26.6■■□□□ 1.85
CLK4-204ENST00000520126 ZFYVE16Q7Z3T8 1539 aa26.59■■□□□ 1.85
CLK4-204ENST00000520126 YEATS2Q9ULM3 1422 aa26.59■■□□□ 1.85
CLK4-204ENST00000520126 CAMSAP2Q08AD1 1489 aa26.58■■□□□ 1.84
CLK4-204ENST00000520126 SPAG9O60271 1321 aaKnown RBP26.57■■□□□ 1.84
CLK4-204ENST00000520126 KIAA1107Q9UPP5 1409 aa26.57■■□□□ 1.84
CLK4-204ENST00000520126 ZMYM4Q5VZL5 1548 aa26.57■■□□□ 1.84
CLK4-204ENST00000520126 MAGI2Q86UL8 1455 aa26.55■■□□□ 1.84
CLK4-204ENST00000520126 ARHGEF40Q8TER5 1519 aa26.52■■□□□ 1.84
CLK4-204ENST00000520126 MIA2Q96PC5 1412 aa26.52■■□□□ 1.84
CLK4-204ENST00000520126 KDM5CP41229 1560 aa26.52■■□□□ 1.84
CLK4-204ENST00000520126 HECW2Q9P2P5 1572 aa26.51■■□□□ 1.83
CLK4-204ENST00000520126 TSPY4P0CV99 314 aa26.49■■□□□ 1.83
CLK4-204ENST00000520126 TSPY10P0CW01 314 aa26.49■■□□□ 1.83
CLK4-204ENST00000520126 MLECQ14165 292 aa26.49■■□□□ 1.83
CLK4-204ENST00000520126 FAM50AQ14320 339 aaKnown RBP26.49■■□□□ 1.83
CLK4-204ENST00000520126 MBD5Q9P267 1494 aa26.48■■□□□ 1.83
CLK4-204ENST00000520126 KDM4FA0A1W2PPD8 638 aa26.48■■□□□ 1.83
CLK4-204ENST00000520126 ATP10AO60312 1499 aa26.48■■□□□ 1.83
CLK4-204ENST00000520126 MLH3Q9UHC1 1453 aa26.48■■□□□ 1.83
CLK4-204ENST00000520126 RSPH4AQ5TD94 716 aa26.47■■□□□ 1.83
CLK4-204ENST00000520126 FGD6Q6ZV73 1430 aa26.47■■□□□ 1.83
CLK4-204ENST00000520126 CCDC141Q6ZP82 1450 aa26.45■■□□□ 1.82
CLK4-204ENST00000520126 C9orf84Q5VXU9 1444 aa26.44■■□□□ 1.82
CLK4-204ENST00000520126 PTPN23Q9H3S7 1636 aa26.44■■□□□ 1.82
CLK4-204ENST00000520126 ATP7AQ04656 1500 aa26.41■■□□□ 1.82
CLK4-204ENST00000520126 KIDINS220Q9ULH0 1771 aa26.41■■□□□ 1.82
CLK4-204ENST00000520126 DIP2CQ9Y2E4 1556 aa26.41■■□□□ 1.82
CLK4-204ENST00000520126 ABCA6Q8N139 1617 aa26.4■■□□□ 1.82
CLK4-204ENST00000520126 ARHGEF5Q12774 1597 aa26.37■■□□□ 1.81
CLK4-204ENST00000520126 PLPPR3Q6T4P5 718 aa26.36■■□□□ 1.81
CLK4-204ENST00000520126 CHIC2Q9UKJ5 165 aa26.35■■□□□ 1.81
CLK4-204ENST00000520126 INO80Q9ULG1 1556 aaPredicted RBP26.35■■□□□ 1.81
CLK4-204ENST00000520126 TCOF1Q13428 1488 aaKnown RBP26.33■■□□□ 1.81
CLK4-204ENST00000520126 RTEL1-TNFRSF6BF6WH68 1400 aa26.33■■□□□ 1.81
CLK4-204ENST00000520126 ITGAEP38570 1179 aa26.33■■□□□ 1.81
CLK4-204ENST00000520126 SIGLEC1Q9BZZ2 1709 aa26.32■■□□□ 1.8
CLK4-204ENST00000520126 A2MP01023 1474 aa26.3■■□□□ 1.8
CLK4-204ENST00000520126 BCORL1Q5H9F3 1711 aa26.29■■□□□ 1.8
CLK4-204ENST00000520126 ABCC5O15440 1437 aa26.29■■□□□ 1.8
CLK4-204ENST00000520126 DAPK1P53355 1430 aa26.29■■□□□ 1.8
CLK4-204ENST00000520126 ESF1Q9H501 851 aaKnown RBP26.28■■□□□ 1.8
CLK4-204ENST00000520126 GGT6Q6P531 493 aa26.26■■□□□ 1.79
CLK4-204ENST00000520126 RRP7BPQ9NSQ0 103 aa26.26■■□□□ 1.79
CLK4-204ENST00000520126 ADGBQ8N7X0 1667 aa26.24■■□□□ 1.79
CLK4-204ENST00000520126 DNMT1P26358 1616 aaKnown RBP26.24■■□□□ 1.79
CLK4-204ENST00000520126 REREQ9P2R6 1566 aa26.24■■□□□ 1.79
CLK4-204ENST00000520126 DHX29Q7Z478 1369 aaKnown RBP26.23■■□□□ 1.79
CLK4-204ENST00000520126 KIF3BO15066 747 aa26.22■■□□□ 1.79
CLK4-204ENST00000520126 MADDQ8WXG6 1647 aa26.22■■□□□ 1.79
CLK4-204ENST00000520126 ADAMTSL3P82987 1691 aa26.22■■□□□ 1.79
CLK4-204ENST00000520126 MAST1Q9Y2H9 1570 aa26.2■■□□□ 1.79
CLK4-204ENST00000520126 AGLP35573 1532 aa26.2■■□□□ 1.78
CLK4-204ENST00000520126 CROCC2H7BZ55 1655 aa26.19■■□□□ 1.78
CLK4-204ENST00000520126 RIMS1Q86UR5 1692 aaKnown RBP26.18■■□□□ 1.78
CLK4-204ENST00000520126 SHANK2Q9UPX8 1470 aa26.18■■□□□ 1.78
CLK4-204ENST00000520126 ANKRD30AQ9BXX3 1397 aa26.17■■□□□ 1.78
CLK4-204ENST00000520126 KIF15Q9NS87 1388 aa26.17■■□□□ 1.78
CLK4-204ENST00000520126 PTPRMP28827 1452 aa26.15■■□□□ 1.78
CLK4-204ENST00000520126 PLXNC1O60486 1568 aa26.15■■□□□ 1.78
CLK4-204ENST00000520126 FER1L4A9Z1Z3 1794 aa26.15■■□□□ 1.78
CLK4-204ENST00000520126 CEBPAP49715 358 aaPredicted RBP26.12■■□□□ 1.77
CLK4-204ENST00000520126 RRBP1Q9P2E9 1410 aaKnown RBP26.11■■□□□ 1.77
CLK4-204ENST00000520126 DUOX2Q9NRD8 1548 aa26.09■■□□□ 1.77
CLK4-204ENST00000520126 PTPRKQ15262 1439 aa26.09■■□□□ 1.77
CLK4-204ENST00000520126 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms