RNA–Protein interactions for RNA: ENST00000520122.1

AP3B1-206, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 3

Gene AP3B1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-206ENST00000520122 BCL11BQ9C0K0 894 aaPredicted RBP14.05□□□□□ -0.16
AP3B1-206ENST00000520122 STK24Q9Y6E0 443 aa14.04□□□□□ -0.16
AP3B1-206ENST00000520122 TMEM92Q6UXU6 159 aa14.03□□□□□ -0.16
AP3B1-206ENST00000520122 ECM2O94769 699 aaPredicted RBP14□□□□□ -0.17
AP3B1-206ENST00000520122 ZSWIM6Q9HCJ5 1215 aa13.99□□□□□ -0.17
AP3B1-206ENST00000520122 STK25O00506 426 aa13.98□□□□□ -0.17
AP3B1-206ENST00000520122 VARS2Q5ST30 1063 aaKnown RBP13.97□□□□□ -0.17
AP3B1-206ENST00000520122 FBXO22Q8NEZ5 403 aa13.92□□□□□ -0.18
AP3B1-206ENST00000520122 GPR153Q6NV75 609 aa13.89□□□□□ -0.19
AP3B1-206ENST00000520122 MFRPQ9BY79 579 aa13.89□□□□□ -0.19
AP3B1-206ENST00000520122 ARSIQ5FYB1 569 aa13.86□□□□□ -0.19
AP3B1-206ENST00000520122 ZNF687Q8N1G0 1237 aa13.84□□□□□ -0.19
AP3B1-206ENST00000520122 RGL2O15211 777 aa13.82□□□□□ -0.2
AP3B1-206ENST00000520122 PKD2Q13563 968 aa13.8□□□□□ -0.2
AP3B1-206ENST00000520122 C2orf72A6NCS6 295 aa13.78□□□□□ -0.2
AP3B1-206ENST00000520122 KHSRPQ92945 711 aaKnown RBP eCLIP13.78□□□□□ -0.2
AP3B1-206ENST00000520122 RNF166Q96A37 237 aaPredicted RBP13.78□□□□□ -0.2
AP3B1-206ENST00000520122 ZNF316A6NFI3 1004 aaPredicted RBP13.76□□□□□ -0.21
AP3B1-206ENST00000520122 TMC2Q8TDI7 906 aa13.76□□□□□ -0.21
AP3B1-206ENST00000520122 MYT1LQ9UL68 1186 aa13.75□□□□□ -0.21
AP3B1-206ENST00000520122 KIF3CO14782 793 aa13.73□□□□□ -0.21
AP3B1-206ENST00000520122 ANKRD13DQ6ZTN6 518 aa13.72□□□□□ -0.21
AP3B1-206ENST00000520122 NUDT7P0C024 238 aa13.69□□□□□ -0.22
AP3B1-206ENST00000520122 PTGER2P43116 358 aa13.69□□□□□ -0.22
AP3B1-206ENST00000520122 PCDHGA4Q9Y5G9 962 aa13.65□□□□□ -0.22
AP3B1-206ENST00000520122 PPP1R37O75864 691 aa13.63□□□□□ -0.23
AP3B1-206ENST00000520122 SLC34A2O95436 690 aa13.63□□□□□ -0.23
AP3B1-206ENST00000520122 LSM11P83369 360 aaKnown RBP eCLIP13.62□□□□□ -0.23
AP3B1-206ENST00000520122 LHX6Q9UPM6 363 aa13.62□□□□□ -0.23
AP3B1-206ENST00000520122 PBX2P40425 430 aa13.59□□□□□ -0.23
AP3B1-206ENST00000520122 HS6ST3Q8IZP7 471 aa13.55□□□□□ -0.24
AP3B1-206ENST00000520122 AXIN2Q9Y2T1 843 aa13.53□□□□□ -0.24
AP3B1-206ENST00000520122 PSDA5PKW4 1024 aaPredicted RBP13.51□□□□□ -0.25
AP3B1-206ENST00000520122 CHGAP10645 457 aaKnown RBP13.51□□□□□ -0.25
AP3B1-206ENST00000520122 PLPP6Q8IY26 295 aa13.49□□□□□ -0.25
AP3B1-206ENST00000520122 FOXK1P85037 733 aa13.48□□□□□ -0.25
AP3B1-206ENST00000520122 PTCD2Q8WV60 388 aaKnown RBP13.47□□□□□ -0.25
AP3B1-206ENST00000520122 GPHNQ9NQX3 736 aaPredicted RBP13.47□□□□□ -0.25
AP3B1-206ENST00000520122 TBC1D12O60347 775 aa13.46□□□□□ -0.25
AP3B1-206ENST00000520122 POTEEQ6S8J3 1075 aa13.46□□□□□ -0.25
AP3B1-206ENST00000520122 ARHGAP33O14559 1287 aa13.45□□□□□ -0.26
AP3B1-206ENST00000520122 DSG2Q14126 1118 aa13.42□□□□□ -0.26
AP3B1-206ENST00000520122 RYDENQ9NUL5 291 aaKnown RBP13.42□□□□□ -0.26
AP3B1-206ENST00000520122 PPP4R3BQ5MIZ7 849 aa13.4□□□□□ -0.26
AP3B1-206ENST00000520122 ADGRD1Q6QNK2 874 aa13.4□□□□□ -0.26
AP3B1-206ENST00000520122 KDM4FA0A1W2PPD8 638 aa13.37□□□□□ -0.27
AP3B1-206ENST00000520122 KCNH8Q96L42 1107 aa13.37□□□□□ -0.27
AP3B1-206ENST00000520122 STAC3Q96MF2 364 aa13.36□□□□□ -0.27
AP3B1-206ENST00000520122 PSEN2P49810 448 aa13.34□□□□□ -0.27
AP3B1-206ENST00000520122 HCSTQ9UBK5 93 aa13.34□□□□□ -0.27
AP3B1-206ENST00000520122 TK2O00142 265 aa13.33□□□□□ -0.28
AP3B1-206ENST00000520122 NKX1-1Q15270 411 aaPredicted RBP13.32□□□□□ -0.28
AP3B1-206ENST00000520122 DMRTA1Q5VZB9 504 aa13.32□□□□□ -0.28
AP3B1-206ENST00000520122 UPF1Q92900 1129 aaKnown RBP eCLIP13.32□□□□□ -0.28
AP3B1-206ENST00000520122 DNAJC5Q9H3Z4 198 aa13.3□□□□□ -0.28
AP3B1-206ENST00000520122 KCNK17Q96T54 332 aa13.29□□□□□ -0.28
AP3B1-206ENST00000520122 PLA2G2EQ9NZK7 142 aa13.28□□□□□ -0.28
AP3B1-206ENST00000520122 PPP1R15BQ5SWA1 713 aa13.26□□□□□ -0.29
AP3B1-206ENST00000520122 OXER1Q8TDS5 423 aa13.26□□□□□ -0.29
AP3B1-206ENST00000520122 CRISPLD2Q9H0B8 497 aa13.25□□□□□ -0.29
AP3B1-206ENST00000520122 HRO43593 1189 aa13.24□□□□□ -0.29
AP3B1-206ENST00000520122 ZNF454Q8N9F8 522 aa13.24□□□□□ -0.29
AP3B1-206ENST00000520122 PDE4AP27815 886 aa13.23□□□□□ -0.29
AP3B1-206ENST00000520122 KCTD12Q96CX2 325 aaKnown RBP13.23□□□□□ -0.29
AP3B1-206ENST00000520122 DCAF8L2P0C7V8 631 aa13.2□□□□□ -0.3
AP3B1-206ENST00000520122 NCKAP5LQ9HCH0 1330 aa13.16□□□□□ -0.3
AP3B1-206ENST00000520122 BCL2L12Q9HB09 334 aa13.16□□□□□ -0.3
AP3B1-206ENST00000520122 VPS9D1Q9Y2B5 631 aa13.16□□□□□ -0.3
AP3B1-206ENST00000520122 LARP6Q9BRS8 491 aaKnown RBP13.15□□□□□ -0.3
AP3B1-206ENST00000520122 PTPREP23469 700 aa13.14□□□□□ -0.31
AP3B1-206ENST00000520122 DDX27Q96GQ7 796 aaKnown RBP13.13□□□□□ -0.31
AP3B1-206ENST00000520122 GTPBP6O43824 516 aaPredicted RBP13.12□□□□□ -0.31
AP3B1-206ENST00000520122 EVI5O60447 810 aa13.12□□□□□ -0.31
AP3B1-206ENST00000520122 FOSBP53539 338 aa13.12□□□□□ -0.31
AP3B1-206ENST00000520122 MAP3K9P80192 1104 aa13.11□□□□□ -0.31
AP3B1-206ENST00000520122 GOLGA8CPA6NN73 597 aa13.1□□□□□ -0.31
AP3B1-206ENST00000520122 PTPN5P54829 565 aa13.1□□□□□ -0.31
AP3B1-206ENST00000520122 JPH4Q96JJ6 628 aa13.09□□□□□ -0.31
AP3B1-206ENST00000520122 SLC4A5Q9BY07 1137 aa13.09□□□□□ -0.31
AP3B1-206ENST00000520122 ANO8Q9HCE9 1232 aaPredicted RBP13.08□□□□□ -0.32
AP3B1-206ENST00000520122 ZDHHC16Q969W1 377 aa13.07□□□□□ -0.32
AP3B1-206ENST00000520122 MRPL50Q8N5N7 158 aaKnown RBP13.04□□□□□ -0.32
AP3B1-206ENST00000520122 ADAM33Q9BZ11 813 aa13.03□□□□□ -0.32
AP3B1-206ENST00000520122 ZBED2Q9BTP6 218 aa13.02□□□□□ -0.33
AP3B1-206ENST00000520122 MFSD10Q14728 455 aa13.01□□□□□ -0.33
AP3B1-206ENST00000520122 WNT2BQ93097 391 aa13.01□□□□□ -0.33
AP3B1-206ENST00000520122 NBPF3Q9H094 633 aa13.01□□□□□ -0.33
AP3B1-206ENST00000520122 BHMG1C9JSJ3 638 aaPredicted RBP13□□□□□ -0.33
AP3B1-206ENST00000520122 THSD4Q6ZMP0 1018 aa12.99□□□□□ -0.33
AP3B1-206ENST00000520122 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
AP3B1-206ENST00000520122 PPP1R3GB7ZBB8 358 aa12.93□□□□□ -0.34
AP3B1-206ENST00000520122 PCDHGA10Q9Y5H3 936 aa12.93□□□□□ -0.34
AP3B1-206ENST00000520122 FBXW7Q969H0 707 aa12.92□□□□□ -0.34
AP3B1-206ENST00000520122 TYW1BQ6NUM6 668 aa12.91□□□□□ -0.34
AP3B1-206ENST00000520122 CADPS2Q86UW7 1296 aa12.91□□□□□ -0.34
AP3B1-206ENST00000520122 PHF14O94880 888 aa12.89□□□□□ -0.35
AP3B1-206ENST00000520122 RABGEF1Q9UJ41 708 aa12.89□□□□□ -0.35
AP3B1-206ENST00000520122 ANKK1Q8NFD2 765 aa12.88□□□□□ -0.35
AP3B1-206ENST00000520122 PROX2Q3B8N5 592 aa12.87□□□□□ -0.35
AP3B1-206ENST00000520122 COL9A1P20849 921 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms