RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 COL17A1Q9UMD9 1497 aaPredicted RBP18.64■□□□□ 0.57
HPS4-218ENST00000519774 ARHGAP5Q13017 1502 aa18.64■□□□□ 0.57
HPS4-218ENST00000519774 PREX2Q70Z35 1606 aa18.63■□□□□ 0.57
HPS4-218ENST00000519774 CDC42BPAQ5VT25 1732 aa18.63■□□□□ 0.57
HPS4-218ENST00000519774 LRRC9Q6ZRR7 1453 aa18.63■□□□□ 0.57
HPS4-218ENST00000519774 SUPT6HQ7KZ85 1726 aaKnown RBP18.63■□□□□ 0.57
HPS4-218ENST00000519774 ARAP3Q8WWN8 1544 aa18.62■□□□□ 0.57
HPS4-218ENST00000519774 CDC42BPBQ9Y5S2 1711 aa18.62■□□□□ 0.57
HPS4-218ENST00000519774 AKNAQ7Z591 1439 aa18.6■□□□□ 0.57
HPS4-218ENST00000519774 PHLDB1Q86UU1 1377 aa18.59■□□□□ 0.57
HPS4-218ENST00000519774 CCNB3Q8WWL7 1395 aa18.59■□□□□ 0.57
HPS4-218ENST00000519774 KANK4Q5T7N3 995 aaPredicted RBP18.58■□□□□ 0.56
HPS4-218ENST00000519774 EFCAB2Q5VUJ9 269 aa18.58■□□□□ 0.56
HPS4-218ENST00000519774 NCOA2Q15596 1464 aa18.58■□□□□ 0.56
HPS4-218ENST00000519774 GPATCH8Q9UKJ3 1502 aaKnown RBP18.57■□□□□ 0.56
HPS4-218ENST00000519774 ADGRL1O94910 1474 aa18.57■□□□□ 0.56
HPS4-218ENST00000519774 ITSN2Q9NZM3 1697 aa18.57■□□□□ 0.56
HPS4-218ENST00000519774 FRMPD1Q5SYB0 1578 aa18.54■□□□□ 0.56
HPS4-218ENST00000519774 DENND4BO75064 1496 aaPredicted RBP18.53■□□□□ 0.56
HPS4-218ENST00000519774 SCAPERQ9BY12 1400 aa18.52■□□□□ 0.56
HPS4-218ENST00000519774 RAPGEF3O95398 923 aa18.52■□□□□ 0.56
HPS4-218ENST00000519774 ZNF777Q9ULD5 760 aaPredicted RBP18.52■□□□□ 0.56
HPS4-218ENST00000519774 RICTORQ6R327 1708 aa18.52■□□□□ 0.55
HPS4-218ENST00000519774 CFDP1Q9UEE9 299 aaPredicted RBP18.51■□□□□ 0.55
HPS4-218ENST00000519774 SAMD9LQ8IVG5 1584 aa18.51■□□□□ 0.55
HPS4-218ENST00000519774 ABCC1P33527 1531 aa18.5■□□□□ 0.55
HPS4-218ENST00000519774 POGZQ7Z3K3 1410 aa18.49■□□□□ 0.55
HPS4-218ENST00000519774 SYCP2Q9BX26 1530 aa18.46■□□□□ 0.55
HPS4-218ENST00000519774 ARHGEF12Q9NZN5 1544 aa18.45■□□□□ 0.54
HPS4-218ENST00000519774 MYOM3Q5VTT5 1437 aa18.44■□□□□ 0.54
HPS4-218ENST00000519774 ZNF518AQ6AHZ1 1483 aa18.44■□□□□ 0.54
HPS4-218ENST00000519774 ZMYM4Q5VZL5 1548 aa18.44■□□□□ 0.54
HPS4-218ENST00000519774 PLEKHH2Q8IVE3 1493 aa18.43■□□□□ 0.54
HPS4-218ENST00000519774 TRAPPC8Q9Y2L5 1435 aa18.42■□□□□ 0.54
HPS4-218ENST00000519774 CAMSAP2Q08AD1 1489 aa18.42■□□□□ 0.54
HPS4-218ENST00000519774 ZNF644Q9H582 1327 aaPredicted RBP18.42■□□□□ 0.54
HPS4-218ENST00000519774 ARHGEF40Q8TER5 1519 aa18.41■□□□□ 0.54
HPS4-218ENST00000519774 PPARGC1BQ86YN6 1023 aaKnown RBP18.41■□□□□ 0.54
HPS4-218ENST00000519774 KDM5CP41229 1560 aa18.41■□□□□ 0.54
HPS4-218ENST00000519774 ZFYVE16Q7Z3T8 1539 aa18.4■□□□□ 0.54
HPS4-218ENST00000519774 HNRNPMP52272 730 aaKnown RBP eCLIP18.4■□□□□ 0.54
HPS4-218ENST00000519774 AFAP1Q8N556 730 aa18.4■□□□□ 0.54
HPS4-218ENST00000519774 HECW2Q9P2P5 1572 aa18.39■□□□□ 0.53
HPS4-218ENST00000519774 KIAA1107Q9UPP5 1409 aa18.39■□□□□ 0.53
HPS4-218ENST00000519774 YEATS2Q9ULM3 1422 aa18.38■□□□□ 0.53
HPS4-218ENST00000519774 MYT1LQ9UL68 1186 aa18.37■□□□□ 0.53
HPS4-218ENST00000519774 MIA2Q96PC5 1412 aa18.37■□□□□ 0.53
HPS4-218ENST00000519774 MAGI2Q86UL8 1455 aa18.36■□□□□ 0.53
HPS4-218ENST00000519774 PTPN23Q9H3S7 1636 aa18.34■□□□□ 0.53
HPS4-218ENST00000519774 FGD6Q6ZV73 1430 aa18.34■□□□□ 0.53
HPS4-218ENST00000519774 MBD5Q9P267 1494 aa18.33■□□□□ 0.53
HPS4-218ENST00000519774 ABCA6Q8N139 1617 aa18.32■□□□□ 0.52
HPS4-218ENST00000519774 KIDINS220Q9ULH0 1771 aa18.32■□□□□ 0.52
HPS4-218ENST00000519774 CCDC141Q6ZP82 1450 aa18.32■□□□□ 0.52
HPS4-218ENST00000519774 MLH3Q9UHC1 1453 aa18.32■□□□□ 0.52
HPS4-218ENST00000519774 SPAG9O60271 1321 aaKnown RBP18.31■□□□□ 0.52
HPS4-218ENST00000519774 ARHGEF5Q12774 1597 aa18.31■□□□□ 0.52
HPS4-218ENST00000519774 DIP2CQ9Y2E4 1556 aa18.31■□□□□ 0.52
HPS4-218ENST00000519774 ATP7AQ04656 1500 aa18.31■□□□□ 0.52
HPS4-218ENST00000519774 INO80Q9ULG1 1556 aaPredicted RBP18.3■□□□□ 0.52
HPS4-218ENST00000519774 ATP10AO60312 1499 aa18.28■□□□□ 0.52
HPS4-218ENST00000519774 TCOF1Q13428 1488 aaKnown RBP18.28■□□□□ 0.52
HPS4-218ENST00000519774 ARID4BQ4LE39 1312 aaPredicted RBP18.27■□□□□ 0.52
HPS4-218ENST00000519774 SIGLEC1Q9BZZ2 1709 aa18.27■□□□□ 0.52
HPS4-218ENST00000519774 C9orf84Q5VXU9 1444 aa18.27■□□□□ 0.52
HPS4-218ENST00000519774 FAM50AQ14320 339 aaKnown RBP18.24■□□□□ 0.51
HPS4-218ENST00000519774 RSPH4AQ5TD94 716 aa18.24■□□□□ 0.51
HPS4-218ENST00000519774 CROCC2H7BZ55 1655 aa18.24■□□□□ 0.51
HPS4-218ENST00000519774 DNMT1P26358 1616 aaKnown RBP18.23■□□□□ 0.51
HPS4-218ENST00000519774 TSPY4P0CV99 314 aa18.22■□□□□ 0.51
HPS4-218ENST00000519774 TSPY10P0CW01 314 aa18.22■□□□□ 0.51
HPS4-218ENST00000519774 RTEL1-TNFRSF6BF6WH68 1400 aa18.22■□□□□ 0.51
HPS4-218ENST00000519774 ADGBQ8N7X0 1667 aa18.22■□□□□ 0.51
HPS4-218ENST00000519774 REREQ9P2R6 1566 aa18.21■□□□□ 0.51
HPS4-218ENST00000519774 BCORL1Q5H9F3 1711 aa18.21■□□□□ 0.51
HPS4-218ENST00000519774 DAPK1P53355 1430 aa18.21■□□□□ 0.51
HPS4-218ENST00000519774 MAST1Q9Y2H9 1570 aa18.21■□□□□ 0.51
HPS4-218ENST00000519774 MSH5O43196 834 aa18.2■□□□□ 0.5
HPS4-218ENST00000519774 KDM4FA0A1W2PPD8 638 aa18.19■□□□□ 0.5
HPS4-218ENST00000519774 ABCC5O15440 1437 aa18.19■□□□□ 0.5
HPS4-218ENST00000519774 MLECQ14165 292 aa18.18■□□□□ 0.5
HPS4-218ENST00000519774 A2MP01023 1474 aa18.18■□□□□ 0.5
HPS4-218ENST00000519774 SHANK2Q9UPX8 1470 aa18.18■□□□□ 0.5
HPS4-218ENST00000519774 PLXNC1O60486 1568 aa18.17■□□□□ 0.5
HPS4-218ENST00000519774 ADAMTSL3P82987 1691 aa18.16■□□□□ 0.5
HPS4-218ENST00000519774 AGLP35573 1532 aa18.16■□□□□ 0.5
HPS4-218ENST00000519774 MADDQ8WXG6 1647 aa18.16■□□□□ 0.5
HPS4-218ENST00000519774 CHIC2Q9UKJ5 165 aa18.13■□□□□ 0.49
HPS4-218ENST00000519774 RRBP1Q9P2E9 1410 aaKnown RBP18.13■□□□□ 0.49
HPS4-218ENST00000519774 RIMS1Q86UR5 1692 aaKnown RBP18.12■□□□□ 0.49
HPS4-218ENST00000519774 FER1L4A9Z1Z3 1794 aa18.12■□□□□ 0.49
HPS4-218ENST00000519774 DHX29Q7Z478 1369 aaKnown RBP18.11■□□□□ 0.49
HPS4-218ENST00000519774 ITGAEP38570 1179 aa18.1■□□□□ 0.49
HPS4-218ENST00000519774 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.09■□□□□ 0.49
HPS4-218ENST00000519774 KIF15Q9NS87 1388 aa18.09■□□□□ 0.49
HPS4-218ENST00000519774 ANKRD30AQ9BXX3 1397 aa18.08■□□□□ 0.49
HPS4-218ENST00000519774 RRP7BPQ9NSQ0 103 aa18.08■□□□□ 0.48
HPS4-218ENST00000519774 DUOX2Q9NRD8 1548 aa18.08■□□□□ 0.48
HPS4-218ENST00000519774 PTPRKQ15262 1439 aa18.07■□□□□ 0.48
HPS4-218ENST00000519774 ADGRL2O95490 1459 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms