RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 DENND4BO75064 1496 aaPredicted RBP18.33■□□□□ 0.52
SPIDR-212ENST00000519661 LRRC9Q6ZRR7 1453 aa18.33■□□□□ 0.52
SPIDR-212ENST00000519661 RICTORQ6R327 1708 aa18.31■□□□□ 0.52
SPIDR-212ENST00000519661 CDC42BPBQ9Y5S2 1711 aa18.31■□□□□ 0.52
SPIDR-212ENST00000519661 ADGRL1O94910 1474 aa18.31■□□□□ 0.52
SPIDR-212ENST00000519661 POGZQ7Z3K3 1410 aa18.31■□□□□ 0.52
SPIDR-212ENST00000519661 CDC42BPAQ5VT25 1732 aa18.3■□□□□ 0.52
SPIDR-212ENST00000519661 MAGI2Q86UL8 1455 aa18.3■□□□□ 0.52
SPIDR-212ENST00000519661 ARHGAP5Q13017 1502 aa18.28■□□□□ 0.52
SPIDR-212ENST00000519661 KIAA1107Q9UPP5 1409 aa18.28■□□□□ 0.52
SPIDR-212ENST00000519661 KDM5CP41229 1560 aa18.28■□□□□ 0.52
SPIDR-212ENST00000519661 ABCC1P33527 1531 aa18.28■□□□□ 0.52
SPIDR-212ENST00000519661 NCOA2Q15596 1464 aa18.26■□□□□ 0.51
SPIDR-212ENST00000519661 SCAPERQ9BY12 1400 aa18.26■□□□□ 0.51
SPIDR-212ENST00000519661 ZNF518AQ6AHZ1 1483 aa18.26■□□□□ 0.51
SPIDR-212ENST00000519661 SUPT6HQ7KZ85 1726 aaKnown RBP18.24■□□□□ 0.51
SPIDR-212ENST00000519661 CCNB3Q8WWL7 1395 aa18.24■□□□□ 0.51
SPIDR-212ENST00000519661 PLEKHH2Q8IVE3 1493 aa18.24■□□□□ 0.51
SPIDR-212ENST00000519661 RAPGEF3O95398 923 aa18.23■□□□□ 0.51
SPIDR-212ENST00000519661 ARHGEF40Q8TER5 1519 aa18.23■□□□□ 0.51
SPIDR-212ENST00000519661 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
SPIDR-212ENST00000519661 SAMD9LQ8IVG5 1584 aa18.22■□□□□ 0.51
SPIDR-212ENST00000519661 ITSN2Q9NZM3 1697 aa18.22■□□□□ 0.51
SPIDR-212ENST00000519661 MLH3Q9UHC1 1453 aa18.21■□□□□ 0.51
SPIDR-212ENST00000519661 KANK4Q5T7N3 995 aaPredicted RBP18.19■□□□□ 0.5
SPIDR-212ENST00000519661 MIA2Q96PC5 1412 aa18.18■□□□□ 0.5
SPIDR-212ENST00000519661 MBD5Q9P267 1494 aa18.18■□□□□ 0.5
SPIDR-212ENST00000519661 CFDP1Q9UEE9 299 aaPredicted RBP18.17■□□□□ 0.5
SPIDR-212ENST00000519661 REREQ9P2R6 1566 aa18.17■□□□□ 0.5
SPIDR-212ENST00000519661 TRAPPC8Q9Y2L5 1435 aa18.16■□□□□ 0.5
SPIDR-212ENST00000519661 ZFYVE16Q7Z3T8 1539 aa18.16■□□□□ 0.5
SPIDR-212ENST00000519661 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
SPIDR-212ENST00000519661 HECW2Q9P2P5 1572 aa18.14■□□□□ 0.49
SPIDR-212ENST00000519661 YEATS2Q9ULM3 1422 aa18.14■□□□□ 0.49
SPIDR-212ENST00000519661 SYCP2Q9BX26 1530 aa18.13■□□□□ 0.49
SPIDR-212ENST00000519661 AFAP1Q8N556 730 aa18.11■□□□□ 0.49
SPIDR-212ENST00000519661 ATP10AO60312 1499 aa18.11■□□□□ 0.49
SPIDR-212ENST00000519661 ARHGEF5Q12774 1597 aa18.1■□□□□ 0.49
SPIDR-212ENST00000519661 KDM4FA0A1W2PPD8 638 aa18.1■□□□□ 0.49
SPIDR-212ENST00000519661 APLP2Q06481 763 aa18.1■□□□□ 0.49
SPIDR-212ENST00000519661 RSPH4AQ5TD94 716 aa18.1■□□□□ 0.49
SPIDR-212ENST00000519661 INO80Q9ULG1 1556 aaPredicted RBP18.09■□□□□ 0.49
SPIDR-212ENST00000519661 CAMSAP2Q08AD1 1489 aa18.09■□□□□ 0.49
SPIDR-212ENST00000519661 RTEL1-TNFRSF6BF6WH68 1400 aa18.09■□□□□ 0.49
SPIDR-212ENST00000519661 DIP2CQ9Y2E4 1556 aa18.08■□□□□ 0.49
SPIDR-212ENST00000519661 C9orf84Q5VXU9 1444 aa18.08■□□□□ 0.49
SPIDR-212ENST00000519661 AGLP35573 1532 aa18.08■□□□□ 0.48
SPIDR-212ENST00000519661 KIDINS220Q9ULH0 1771 aa18.07■□□□□ 0.48
SPIDR-212ENST00000519661 TCOF1Q13428 1488 aaKnown RBP18.07■□□□□ 0.48
SPIDR-212ENST00000519661 ZNF644Q9H582 1327 aaPredicted RBP18.06■□□□□ 0.48
SPIDR-212ENST00000519661 CCDC141Q6ZP82 1450 aa18.06■□□□□ 0.48
SPIDR-212ENST00000519661 ABCA6Q8N139 1617 aa18.05■□□□□ 0.48
SPIDR-212ENST00000519661 ATP7AQ04656 1500 aa18.04■□□□□ 0.48
SPIDR-212ENST00000519661 ADAMTSL3P82987 1691 aa18.04■□□□□ 0.48
SPIDR-212ENST00000519661 FGD6Q6ZV73 1430 aa18.04■□□□□ 0.48
SPIDR-212ENST00000519661 HNRNPMP52272 730 aaKnown RBP eCLIP18.03■□□□□ 0.483e-6■■■■□ 25.9
SPIDR-212ENST00000519661 PLXNC1O60486 1568 aa18.03■□□□□ 0.48
SPIDR-212ENST00000519661 SIGLEC1Q9BZZ2 1709 aa18.03■□□□□ 0.48
SPIDR-212ENST00000519661 BCORL1Q5H9F3 1711 aa18.02■□□□□ 0.48
SPIDR-212ENST00000519661 ZNF777Q9ULD5 760 aaPredicted RBP18.02■□□□□ 0.48
SPIDR-212ENST00000519661 MAST1Q9Y2H9 1570 aa18.02■□□□□ 0.48
SPIDR-212ENST00000519661 SPAG9O60271 1321 aaKnown RBP18.01■□□□□ 0.47
SPIDR-212ENST00000519661 SHANK2Q9UPX8 1470 aa18■□□□□ 0.47
SPIDR-212ENST00000519661 PTPN23Q9H3S7 1636 aa17.97■□□□□ 0.47
SPIDR-212ENST00000519661 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.95■□□□□ 0.46
SPIDR-212ENST00000519661 A2MP01023 1474 aa17.94■□□□□ 0.46
SPIDR-212ENST00000519661 ADGBQ8N7X0 1667 aa17.93■□□□□ 0.46
SPIDR-212ENST00000519661 ABCC5O15440 1437 aa17.93■□□□□ 0.46
SPIDR-212ENST00000519661 DNMT1P26358 1616 aaKnown RBP17.93■□□□□ 0.46
SPIDR-212ENST00000519661 DHX29Q7Z478 1369 aaKnown RBP17.92■□□□□ 0.46
SPIDR-212ENST00000519661 MADDQ8WXG6 1647 aa17.9■□□□□ 0.46
SPIDR-212ENST00000519661 PTPRMP28827 1452 aa17.9■□□□□ 0.46
SPIDR-212ENST00000519661 FAM135AQ9P2D6 1515 aa17.9■□□□□ 0.46
SPIDR-212ENST00000519661 CROCC2H7BZ55 1655 aa17.9■□□□□ 0.46
SPIDR-212ENST00000519661 DAPK1P53355 1430 aa17.89■□□□□ 0.46
SPIDR-212ENST00000519661 TSPY4P0CV99 314 aa17.88■□□□□ 0.45
SPIDR-212ENST00000519661 TSPY10P0CW01 314 aa17.88■□□□□ 0.45
SPIDR-212ENST00000519661 PPP6R1Q9UPN7 881 aa17.88■□□□□ 0.45
SPIDR-212ENST00000519661 ADGRL2O95490 1459 aa17.88■□□□□ 0.45
SPIDR-212ENST00000519661 ARID4BQ4LE39 1312 aaPredicted RBP17.87■□□□□ 0.45
SPIDR-212ENST00000519661 RRBP1Q9P2E9 1410 aaKnown RBP17.87■□□□□ 0.45
SPIDR-212ENST00000519661 CNTLNQ9NXG0 1405 aa17.86■□□□□ 0.45
SPIDR-212ENST00000519661 EIF2AK4Q9P2K8 1649 aaKnown RBP17.83■□□□□ 0.45
SPIDR-212ENST00000519661 AEBP2Q6ZN18 517 aaPredicted RBP17.83■□□□□ 0.44
SPIDR-212ENST00000519661 DUOX2Q9NRD8 1548 aa17.82■□□□□ 0.44
SPIDR-212ENST00000519661 NCOA1Q15788 1441 aa17.82■□□□□ 0.44
SPIDR-212ENST00000519661 ERBINQ96RT1 1412 aa17.81■□□□□ 0.44
SPIDR-212ENST00000519661 FER1L4A9Z1Z3 1794 aa17.81■□□□□ 0.44
SPIDR-212ENST00000519661 RNF17Q9BXT8 1623 aaKnown RBP17.81■□□□□ 0.44
SPIDR-212ENST00000519661 MYT1LQ9UL68 1186 aa17.8■□□□□ 0.44
SPIDR-212ENST00000519661 MROH2AA6NES4 1674 aa17.8■□□□□ 0.44
SPIDR-212ENST00000519661 ROCK1Q13464 1354 aa17.79■□□□□ 0.44
SPIDR-212ENST00000519661 RIMS1Q86UR5 1692 aaKnown RBP17.79■□□□□ 0.44
SPIDR-212ENST00000519661 KIF15Q9NS87 1388 aa17.79■□□□□ 0.44
SPIDR-212ENST00000519661 KDM5DQ9BY66 1539 aa17.78■□□□□ 0.44
SPIDR-212ENST00000519661 ANKRD30AQ9BXX3 1397 aa17.78■□□□□ 0.44
SPIDR-212ENST00000519661 PTPRKQ15262 1439 aa17.77■□□□□ 0.44
SPIDR-212ENST00000519661 MROH1Q8NDA8 1641 aa17.76■□□□□ 0.43
SPIDR-212ENST00000519661 NPATQ14207 1427 aa17.74■□□□□ 0.43
SPIDR-212ENST00000519661 PRDM15P57071 1507 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms