RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 MS4A4AQ96JQ5 239 aa7.3□□□□□ -1.24
PABPC1-211ENST00000519596 ZNF316A6NFI3 1004 aaPredicted RBP7.29□□□□□ -1.24
PABPC1-211ENST00000519596 LSM11P83369 360 aaKnown RBP eCLIP7.29□□□□□ -1.24
PABPC1-211ENST00000519596 PLA2G2EQ9NZK7 142 aa7.26□□□□□ -1.25
PABPC1-211ENST00000519596 PHF8Q9UPP1 1060 aa7.25□□□□□ -1.25
PABPC1-211ENST00000519596 SOX12O15370 315 aa7.24□□□□□ -1.25
PABPC1-211ENST00000519596 POTEEQ6S8J3 1075 aa7.24□□□□□ -1.25
PABPC1-211ENST00000519596 TRIM41Q8WV44 630 aa7.23□□□□□ -1.25
PABPC1-211ENST00000519596 AXIN2Q9Y2T1 843 aa7.22□□□□□ -1.25
PABPC1-211ENST00000519596 NUDT7P0C024 238 aa7.2□□□□□ -1.26
PABPC1-211ENST00000519596 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.19□□□□□ -1.26
PABPC1-211ENST00000519596 PBX2P40425 430 aa7.19□□□□□ -1.26
PABPC1-211ENST00000519596 RNF25Q96BH1 459 aaPredicted RBP7.19□□□□□ -1.26
PABPC1-211ENST00000519596 ZFP91Q96JP5 570 aaPredicted RBP7.19□□□□□ -1.26
PABPC1-211ENST00000519596 HCSTQ9UBK5 93 aa7.19□□□□□ -1.26
PABPC1-211ENST00000519596 LHX6Q9UPM6 363 aa7.18□□□□□ -1.26
PABPC1-211ENST00000519596 RIOK3O14730 519 aaKnown RBP7.17□□□□□ -1.26
PABPC1-211ENST00000519596 KIF3CO14782 793 aa7.15□□□□□ -1.26
PABPC1-211ENST00000519596 FBXO22Q8NEZ5 403 aa7.15□□□□□ -1.26
PABPC1-211ENST00000519596 C2orf72A6NCS6 295 aa7.14□□□□□ -1.27
PABPC1-211ENST00000519596 ADGRD1Q6QNK2 874 aa7.14□□□□□ -1.27
PABPC1-211ENST00000519596 VGFO15240 615 aaPredicted RBP7.13□□□□□ -1.27
PABPC1-211ENST00000519596 PCDHGA4Q9Y5G9 962 aa7.13□□□□□ -1.27
PABPC1-211ENST00000519596 NLRP6P59044 892 aa7.12□□□□□ -1.27
PABPC1-211ENST00000519596 TAOK2Q9UL54 1235 aa7.1□□□□□ -1.27
PABPC1-211ENST00000519596 ARHGAP33O14559 1287 aa7.09□□□□□ -1.27
PABPC1-211ENST00000519596 SLC34A2O95436 690 aa7.09□□□□□ -1.27
PABPC1-211ENST00000519596 HRO43593 1189 aa7.08□□□□□ -1.28
PABPC1-211ENST00000519596 DMRTA1Q5VZB9 504 aa7.08□□□□□ -1.28
PABPC1-211ENST00000519596 MFRPQ9BY79 579 aa7.08□□□□□ -1.28
PABPC1-211ENST00000519596 PSEN2P49810 448 aa7.06□□□□□ -1.28
PABPC1-211ENST00000519596 KCTD12Q96CX2 325 aaKnown RBP7.06□□□□□ -1.28
PABPC1-211ENST00000519596 BCL11BQ9C0K0 894 aaPredicted RBP7.06□□□□□ -1.28
PABPC1-211ENST00000519596 TK2O00142 265 aa7.05□□□□□ -1.28
PABPC1-211ENST00000519596 KDM4FA0A1W2PPD8 638 aa7.04□□□□□ -1.28
PABPC1-211ENST00000519596 STK24Q9Y6E0 443 aa7.03□□□□□ -1.28
PABPC1-211ENST00000519596 PSDA5PKW4 1024 aaPredicted RBP7.02□□□□□ -1.29
PABPC1-211ENST00000519596 ECM2O94769 699 aaPredicted RBP7.02□□□□□ -1.29
PABPC1-211ENST00000519596 TMC2Q8TDI7 906 aa7.02□□□□□ -1.29
PABPC1-211ENST00000519596 PTPN5P54829 565 aa6.98□□□□□ -1.29
PABPC1-211ENST00000519596 IRX2Q9BZI1 471 aaPredicted RBP6.98□□□□□ -1.29
PABPC1-211ENST00000519596 RGS20O76081 388 aa6.97□□□□□ -1.29
PABPC1-211ENST00000519596 PTCD2Q8WV60 388 aaKnown RBP6.97□□□□□ -1.29
PABPC1-211ENST00000519596 STAC3Q96MF2 364 aa6.97□□□□□ -1.29
PABPC1-211ENST00000519596 STK25O00506 426 aa6.96□□□□□ -1.3
PABPC1-211ENST00000519596 PPP4R3BQ5MIZ7 849 aa6.95□□□□□ -1.3
PABPC1-211ENST00000519596 KCNK17Q96T54 332 aa6.95□□□□□ -1.3
PABPC1-211ENST00000519596 PPP1R37O75864 691 aa6.94□□□□□ -1.3
PABPC1-211ENST00000519596 IFFO2Q5TF58 517 aa6.94□□□□□ -1.3
PABPC1-211ENST00000519596 VPS9D1Q9Y2B5 631 aa6.94□□□□□ -1.3
PABPC1-211ENST00000519596 A0A0G2JS52 829 aa6.93□□□□□ -1.3
PABPC1-211ENST00000519596 PLPP6Q8IY26 295 aa6.91□□□□□ -1.3
PABPC1-211ENST00000519596 PKD2Q13563 968 aa6.9□□□□□ -1.3
PABPC1-211ENST00000519596 THSD4Q6ZMP0 1018 aa6.9□□□□□ -1.3
PABPC1-211ENST00000519596 RGL2O15211 777 aa6.89□□□□□ -1.31
PABPC1-211ENST00000519596 FOXK1P85037 733 aa6.89□□□□□ -1.31
PABPC1-211ENST00000519596 KCNH8Q96L42 1107 aa6.88□□□□□ -1.31
PABPC1-211ENST00000519596 BHMG1C9JSJ3 638 aaPredicted RBP6.87□□□□□ -1.31
PABPC1-211ENST00000519596 DSG2Q14126 1118 aa6.86□□□□□ -1.31
PABPC1-211ENST00000519596 SLC4A5Q9BY07 1137 aa6.86□□□□□ -1.31
PABPC1-211ENST00000519596 TBC1D12O60347 775 aa6.85□□□□□ -1.31
PABPC1-211ENST00000519596 WNT2BQ93097 391 aa6.85□□□□□ -1.31
PABPC1-211ENST00000519596 GPHNQ9NQX3 736 aaPredicted RBP6.85□□□□□ -1.31
PABPC1-211ENST00000519596 ZNF454Q8N9F8 522 aa6.83□□□□□ -1.32
PABPC1-211ENST00000519596 BCL2L12Q9HB09 334 aa6.83□□□□□ -1.32
PABPC1-211ENST00000519596 GOLGA8CPA6NN73 597 aa6.82□□□□□ -1.32
PABPC1-211ENST00000519596 Q6ZNB5 142 aa6.82□□□□□ -1.32
PABPC1-211ENST00000519596 ZBED2Q9BTP6 218 aa6.82□□□□□ -1.32
PABPC1-211ENST00000519596 MRPL50Q8N5N7 158 aaKnown RBP6.81□□□□□ -1.32
PABPC1-211ENST00000519596 OXER1Q8TDS5 423 aa6.81□□□□□ -1.32
PABPC1-211ENST00000519596 UPF1Q92900 1129 aaKnown RBP eCLIP6.8□□□□□ -1.32
PABPC1-211ENST00000519596 PTPREP23469 700 aa6.79□□□□□ -1.32
PABPC1-211ENST00000519596 FOSBP53539 338 aa6.79□□□□□ -1.32
PABPC1-211ENST00000519596 ITGBL1O95965 494 aaPredicted RBP6.78□□□□□ -1.32
PABPC1-211ENST00000519596 CHGAP10645 457 aaKnown RBP6.78□□□□□ -1.32
PABPC1-211ENST00000519596 LCE2BO14633 110 aa6.77□□□□□ -1.33
PABPC1-211ENST00000519596 HS6ST3Q8IZP7 471 aa6.77□□□□□ -1.33
PABPC1-211ENST00000519596 RYDENQ9NUL5 291 aaKnown RBP6.76□□□□□ -1.33
PABPC1-211ENST00000519596 ADAM33Q9BZ11 813 aa6.75□□□□□ -1.33
PABPC1-211ENST00000519596 NBPF3Q9H094 633 aa6.75□□□□□ -1.33
PABPC1-211ENST00000519596 JPH4Q96JJ6 628 aa6.73□□□□□ -1.33
PABPC1-211ENST00000519596 BCAMP50895 628 aa6.72□□□□□ -1.33
PABPC1-211ENST00000519596 ZDHHC16Q969W1 377 aa6.72□□□□□ -1.33
PABPC1-211ENST00000519596 ANO8Q9HCE9 1232 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-211ENST00000519596 DCAF8L2P0C7V8 631 aa6.71□□□□□ -1.34
PABPC1-211ENST00000519596 ANKK1Q8NFD2 765 aa6.71□□□□□ -1.34
PABPC1-211ENST00000519596 PROX2Q3B8N5 592 aa6.7□□□□□ -1.34
PABPC1-211ENST00000519596 EVI5O60447 810 aa6.69□□□□□ -1.34
PABPC1-211ENST00000519596 PPP1R15BQ5SWA1 713 aa6.69□□□□□ -1.34
PABPC1-211ENST00000519596 CRISPLD2Q9H0B8 497 aa6.69□□□□□ -1.34
PABPC1-211ENST00000519596 RABGEF1Q9UJ41 708 aa6.69□□□□□ -1.34
PABPC1-211ENST00000519596 SOWAHBA6NEL2 793 aa6.68□□□□□ -1.34
PABPC1-211ENST00000519596 COL9A1P20849 921 aa6.68□□□□□ -1.34
PABPC1-211ENST00000519596 KCNC4Q03721 635 aa6.68□□□□□ -1.34
PABPC1-211ENST00000519596 PPP1R3GB7ZBB8 358 aa6.67□□□□□ -1.34
PABPC1-211ENST00000519596 TRAF7Q6Q0C0 670 aa6.67□□□□□ -1.34
PABPC1-211ENST00000519596 WBP1LQ9NX94 342 aa6.67□□□□□ -1.34
PABPC1-211ENST00000519596 GFRA3O60609 400 aa6.66□□□□□ -1.34
PABPC1-211ENST00000519596 LAPTM4AQ15012 233 aa6.66□□□□□ -1.34
PABPC1-211ENST00000519596 DNAJC5Q9H3Z4 198 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms