RNA–Protein interactions for RNA: ENST00000519515.1

VPS37A-205, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37A, Length 266 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-205ENST00000519515 PPP1R37O75864 691 aa14.2□□□□□ -0.14
VPS37A-205ENST00000519515 FAM205CA6NFA0 338 aa14.16□□□□□ -0.14
VPS37A-205ENST00000519515 RIMBP2O15034 1052 aa14.16□□□□□ -0.14
VPS37A-205ENST00000519515 HOXB1P14653 301 aaPredicted RBP14.16□□□□□ -0.14
VPS37A-205ENST00000519515 POTEB3A0JP26 581 aa14.12□□□□□ -0.15
VPS37A-205ENST00000519515 POTEBQ6S5H4 581 aa14.12□□□□□ -0.15
VPS37A-205ENST00000519515 HS3ST6Q96QI5 342 aa14.12□□□□□ -0.15
VPS37A-205ENST00000519515 C2orf72A6NCS6 295 aa14.11□□□□□ -0.15
VPS37A-205ENST00000519515 KIF3CO14782 793 aa14.1□□□□□ -0.15
VPS37A-205ENST00000519515 NKX1-1Q15270 411 aaPredicted RBP14.1□□□□□ -0.15
VPS37A-205ENST00000519515 DNAJC5Q9H3Z4 198 aa14.09□□□□□ -0.15
VPS37A-205ENST00000519515 ZSWIM6Q9HCJ5 1215 aa14.09□□□□□ -0.15
VPS37A-205ENST00000519515 DCAF8L2P0C7V8 631 aa14.06□□□□□ -0.16
VPS37A-205ENST00000519515 GPR153Q6NV75 609 aa14.06□□□□□ -0.16
VPS37A-205ENST00000519515 TMC2Q8TDI7 906 aa14.06□□□□□ -0.16
VPS37A-205ENST00000519515 ERBB3P21860 1342 aa14.05□□□□□ -0.16
VPS37A-205ENST00000519515 ARSIQ5FYB1 569 aa14.03□□□□□ -0.16
VPS37A-205ENST00000519515 RYDENQ9NUL5 291 aaKnown RBP13.99□□□□□ -0.17
VPS37A-205ENST00000519515 KHSRPQ92945 711 aaKnown RBP eCLIP13.98□□□□□ -0.17
VPS37A-205ENST00000519515 VARS2Q5ST30 1063 aaKnown RBP13.97□□□□□ -0.17
VPS37A-205ENST00000519515 KRTAP3-3Q9BYR6 98 aa13.96□□□□□ -0.17
VPS37A-205ENST00000519515 KRTAP3-2Q9BYR7 98 aa13.96□□□□□ -0.17
VPS37A-205ENST00000519515 SPNS2Q8IVW8 549 aa13.93□□□□□ -0.18
VPS37A-205ENST00000519515 SLC34A2O95436 690 aa13.92□□□□□ -0.18
VPS37A-205ENST00000519515 GPHNQ9NQX3 736 aaPredicted RBP13.92□□□□□ -0.18
VPS37A-205ENST00000519515 GTPBP6O43824 516 aaPredicted RBP13.91□□□□□ -0.18
VPS37A-205ENST00000519515 PCDHGA4Q9Y5G9 962 aa13.9□□□□□ -0.18
VPS37A-205ENST00000519515 FOXK1P85037 733 aa13.89□□□□□ -0.19
VPS37A-205ENST00000519515 NUDT7P0C024 238 aa13.88□□□□□ -0.19
VPS37A-205ENST00000519515 PLPP6Q8IY26 295 aa13.88□□□□□ -0.19
VPS37A-205ENST00000519515 ZNF316A6NFI3 1004 aaPredicted RBP13.87□□□□□ -0.19
VPS37A-205ENST00000519515 DSG2Q14126 1118 aa13.86□□□□□ -0.19
VPS37A-205ENST00000519515 ZNF687Q8N1G0 1237 aa13.86□□□□□ -0.19
VPS37A-205ENST00000519515 MMRN1Q13201 1228 aa13.85□□□□□ -0.19
VPS37A-205ENST00000519515 PTCD2Q8WV60 388 aaKnown RBP13.8□□□□□ -0.2
VPS37A-205ENST00000519515 LHX6Q9UPM6 363 aa13.8□□□□□ -0.2
VPS37A-205ENST00000519515 AMER1Q5JTC6 1135 aaPredicted RBP13.79□□□□□ -0.2
VPS37A-205ENST00000519515 CRISPLD2Q9H0B8 497 aa13.79□□□□□ -0.2
VPS37A-205ENST00000519515 PDE4AP27815 886 aa13.76□□□□□ -0.21
VPS37A-205ENST00000519515 NCKAP5LQ9HCH0 1330 aa13.75□□□□□ -0.21
VPS37A-205ENST00000519515 RTN4Q9NQC3 1192 aaKnown RBP13.74□□□□□ -0.21
VPS37A-205ENST00000519515 TBC1D12O60347 775 aa13.73□□□□□ -0.21
VPS37A-205ENST00000519515 KDM4FA0A1W2PPD8 638 aa13.72□□□□□ -0.21
VPS37A-205ENST00000519515 PPP1R15BQ5SWA1 713 aa13.72□□□□□ -0.21
VPS37A-205ENST00000519515 LARP6Q9BRS8 491 aaKnown RBP13.7□□□□□ -0.22
VPS37A-205ENST00000519515 BBXQ8WY36 941 aaPredicted RBP13.69□□□□□ -0.22
VPS37A-205ENST00000519515 ANKRD13DQ6ZTN6 518 aa13.68□□□□□ -0.22
VPS37A-205ENST00000519515 UPF1Q92900 1129 aaKnown RBP eCLIP13.68□□□□□ -0.22
VPS37A-205ENST00000519515 OXER1Q8TDS5 423 aa13.67□□□□□ -0.22
VPS37A-205ENST00000519515 DDX27Q96GQ7 796 aaKnown RBP13.65□□□□□ -0.22
VPS37A-205ENST00000519515 AXIN2Q9Y2T1 843 aa13.65□□□□□ -0.22
VPS37A-205ENST00000519515 PSDA5PKW4 1024 aaPredicted RBP13.64□□□□□ -0.23
VPS37A-205ENST00000519515 POTEEQ6S8J3 1075 aa13.64□□□□□ -0.23
VPS37A-205ENST00000519515 CADPS2Q86UW7 1296 aa13.64□□□□□ -0.23
VPS37A-205ENST00000519515 PBX2P40425 430 aa13.63□□□□□ -0.23
VPS37A-205ENST00000519515 LSM11P83369 360 aaKnown RBP eCLIP13.63□□□□□ -0.23
VPS37A-205ENST00000519515 MFSD10Q14728 455 aa13.6□□□□□ -0.23
VPS37A-205ENST00000519515 MYT1LQ9UL68 1186 aa13.58□□□□□ -0.24
VPS37A-205ENST00000519515 ARHGAP33O14559 1287 aa13.57□□□□□ -0.24
VPS37A-205ENST00000519515 PPP4R3BQ5MIZ7 849 aa13.57□□□□□ -0.24
VPS37A-205ENST00000519515 RNF166Q96A37 237 aaPredicted RBP13.56□□□□□ -0.24
VPS37A-205ENST00000519515 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.56□□□□□ -0.24
VPS37A-205ENST00000519515 SPRYD3Q8NCJ5 442 aa13.55□□□□□ -0.24
VPS37A-205ENST00000519515 PTGER2P43116 358 aa13.53□□□□□ -0.24
VPS37A-205ENST00000519515 MAP3K9P80192 1104 aa13.52□□□□□ -0.25
VPS37A-205ENST00000519515 EVI5O60447 810 aa13.51□□□□□ -0.25
VPS37A-205ENST00000519515 PSEN2P49810 448 aa13.51□□□□□ -0.25
VPS37A-205ENST00000519515 EMILIN3Q9NT22 766 aa13.51□□□□□ -0.25
VPS37A-205ENST00000519515 ZNF454Q8N9F8 522 aa13.5□□□□□ -0.25
VPS37A-205ENST00000519515 ANO8Q9HCE9 1232 aaPredicted RBP13.5□□□□□ -0.25
VPS37A-205ENST00000519515 DMRTA1Q5VZB9 504 aa13.48□□□□□ -0.25
VPS37A-205ENST00000519515 PAXIP1Q6ZW49 1069 aaPredicted RBP13.47□□□□□ -0.25
VPS37A-205ENST00000519515 CFAP44Q96MT7 982 aa13.47□□□□□ -0.25
VPS37A-205ENST00000519515 ADGRD1Q6QNK2 874 aa13.46□□□□□ -0.25
VPS37A-205ENST00000519515 FOSBP53539 338 aa13.45□□□□□ -0.26
VPS37A-205ENST00000519515 KCNK17Q96T54 332 aa13.45□□□□□ -0.26
VPS37A-205ENST00000519515 KCNH8Q96L42 1107 aa13.42□□□□□ -0.26
VPS37A-205ENST00000519515 TK2O00142 265 aa13.41□□□□□ -0.26
VPS37A-205ENST00000519515 CAMK2BQ13554 666 aa13.41□□□□□ -0.26
VPS37A-205ENST00000519515 JPH4Q96JJ6 628 aa13.41□□□□□ -0.26
VPS37A-205ENST00000519515 BCL2L12Q9HB09 334 aa13.4□□□□□ -0.26
VPS37A-205ENST00000519515 ZDHHC16Q969W1 377 aa13.37□□□□□ -0.27
VPS37A-205ENST00000519515 HRO43593 1189 aa13.36□□□□□ -0.27
VPS37A-205ENST00000519515 PTPREP23469 700 aa13.36□□□□□ -0.27
VPS37A-205ENST00000519515 DPYSL4O14531 572 aa13.35□□□□□ -0.27
VPS37A-205ENST00000519515 ADAM33Q9BZ11 813 aa13.35□□□□□ -0.27
VPS37A-205ENST00000519515 VPS9D1Q9Y2B5 631 aa13.33□□□□□ -0.28
VPS37A-205ENST00000519515 PCDHGA10Q9Y5H3 936 aa13.33□□□□□ -0.28
VPS37A-205ENST00000519515 STAC3Q96MF2 364 aa13.32□□□□□ -0.28
VPS37A-205ENST00000519515 PHF14O94880 888 aa13.28□□□□□ -0.28
VPS37A-205ENST00000519515 SLC4A5Q9BY07 1137 aa13.28□□□□□ -0.28
VPS37A-205ENST00000519515 TYW1BQ6NUM6 668 aa13.27□□□□□ -0.29
VPS37A-205ENST00000519515 ZBED2Q9BTP6 218 aa13.27□□□□□ -0.29
VPS37A-205ENST00000519515 WDR70Q9NW82 654 aa13.27□□□□□ -0.29
VPS37A-205ENST00000519515 FBXW7Q969H0 707 aa13.25□□□□□ -0.29
VPS37A-205ENST00000519515 E2F4Q16254 413 aa13.24□□□□□ -0.29
VPS37A-205ENST00000519515 KCTD12Q96CX2 325 aaKnown RBP13.23□□□□□ -0.29
VPS37A-205ENST00000519515 HCSTQ9UBK5 93 aa13.23□□□□□ -0.29
VPS37A-205ENST00000519515 DDX12PQ92771 950 aa13.22□□□□□ -0.29
VPS37A-205ENST00000519515 BHMG1C9JSJ3 638 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms