RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 ZFYVE16Q7Z3T8 1539 aa20.26■□□□□ 0.83
TRAPPC9-206ENST00000519482 SCAPERQ9BY12 1400 aa20.26■□□□□ 0.83
TRAPPC9-206ENST00000519482 EFCAB2Q5VUJ9 269 aa20.25■□□□□ 0.83
TRAPPC9-206ENST00000519482 ARID4BQ4LE39 1312 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC9-206ENST00000519482 PTPRMP28827 1452 aa20.24■□□□□ 0.83
TRAPPC9-206ENST00000519482 POGZQ7Z3K3 1410 aa20.24■□□□□ 0.83
TRAPPC9-206ENST00000519482 MADDQ8WXG6 1647 aa20.24■□□□□ 0.83
TRAPPC9-206ENST00000519482 FYCO1Q9BQS8 1478 aa20.22■□□□□ 0.83
TRAPPC9-206ENST00000519482 CDC42BPBQ9Y5S2 1711 aa20.22■□□□□ 0.83
TRAPPC9-206ENST00000519482 ARHGAP5Q13017 1502 aa20.21■□□□□ 0.83
TRAPPC9-206ENST00000519482 YEATS2Q9ULM3 1422 aa20.19■□□□□ 0.82
TRAPPC9-206ENST00000519482 SIGLEC1Q9BZZ2 1709 aa20.19■□□□□ 0.82
TRAPPC9-206ENST00000519482 PREX2Q70Z35 1606 aa20.18■□□□□ 0.82
TRAPPC9-206ENST00000519482 RIMS1Q86UR5 1692 aaKnown RBP20.17■□□□□ 0.82
TRAPPC9-206ENST00000519482 ZNF518AQ6AHZ1 1483 aa20.17■□□□□ 0.82
TRAPPC9-206ENST00000519482 KDM5CP41229 1560 aa20.15■□□□□ 0.82
TRAPPC9-206ENST00000519482 CDC42BPAQ5VT25 1732 aa20.14■□□□□ 0.81
TRAPPC9-206ENST00000519482 ATP10AO60312 1499 aa20.14■□□□□ 0.81
TRAPPC9-206ENST00000519482 C9orf84Q5VXU9 1444 aa20.11■□□□□ 0.81
TRAPPC9-206ENST00000519482 FER1L4A9Z1Z3 1794 aa20.11■□□□□ 0.81
TRAPPC9-206ENST00000519482 ITSN2Q9NZM3 1697 aa20.1■□□□□ 0.81
TRAPPC9-206ENST00000519482 ABCC1P33527 1531 aa20.09■□□□□ 0.81
TRAPPC9-206ENST00000519482 AFAP1Q8N556 730 aa20.08■□□□□ 0.81
TRAPPC9-206ENST00000519482 MLH3Q9UHC1 1453 aa20.06■□□□□ 0.8
TRAPPC9-206ENST00000519482 DIP2CQ9Y2E4 1556 aa20.06■□□□□ 0.8
TRAPPC9-206ENST00000519482 REREQ9P2R6 1566 aa20.05■□□□□ 0.8
TRAPPC9-206ENST00000519482 ARHGEF12Q9NZN5 1544 aa20.05■□□□□ 0.8
TRAPPC9-206ENST00000519482 MLECQ14165 292 aa20.04■□□□□ 0.8
TRAPPC9-206ENST00000519482 ABCA6Q8N139 1617 aa20.03■□□□□ 0.8
TRAPPC9-206ENST00000519482 LMTK3Q96Q04 1460 aa20.03■□□□□ 0.8
TRAPPC9-206ENST00000519482 TRAPPC8Q9Y2L5 1435 aa20.02■□□□□ 0.8
TRAPPC9-206ENST00000519482 MYT1LQ9UL68 1186 aa20.02■□□□□ 0.8
TRAPPC9-206ENST00000519482 GPATCH8Q9UKJ3 1502 aaKnown RBP20.02■□□□□ 0.79
TRAPPC9-206ENST00000519482 CEP162Q5TB80 1403 aa20.01■□□□□ 0.79
TRAPPC9-206ENST00000519482 KIDINS220Q9ULH0 1771 aa20■□□□□ 0.79
TRAPPC9-206ENST00000519482 SAMD9LQ8IVG5 1584 aa20■□□□□ 0.79
TRAPPC9-206ENST00000519482 MTUS2Q5JR59 1369 aa19.98■□□□□ 0.79
TRAPPC9-206ENST00000519482 AGLP35573 1532 aa19.97■□□□□ 0.79
TRAPPC9-206ENST00000519482 CCNB3Q8WWL7 1395 aa19.96■□□□□ 0.79
TRAPPC9-206ENST00000519482 ZNF777Q9ULD5 760 aaPredicted RBP19.96■□□□□ 0.79
TRAPPC9-206ENST00000519482 EHBP1L1Q8N3D4 1523 aa19.96■□□□□ 0.79
TRAPPC9-206ENST00000519482 SYCP2Q9BX26 1530 aa19.96■□□□□ 0.79
TRAPPC9-206ENST00000519482 PLEKHH2Q8IVE3 1493 aa19.95■□□□□ 0.78
TRAPPC9-206ENST00000519482 ILDR1Q86SU0 546 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC9-206ENST00000519482 KIAA1107Q9UPP5 1409 aa19.94■□□□□ 0.78
TRAPPC9-206ENST00000519482 PLPPR3Q6T4P5 718 aa19.94■□□□□ 0.78
TRAPPC9-206ENST00000519482 PREX1Q8TCU6 1659 aa19.94■□□□□ 0.78
TRAPPC9-206ENST00000519482 CFDP1Q9UEE9 299 aaPredicted RBP19.93■□□□□ 0.78
TRAPPC9-206ENST00000519482 TIAM1Q13009 1591 aa19.91■□□□□ 0.78
TRAPPC9-206ENST00000519482 SETD1BQ9UPS6 1966 aaKnown RBP19.91■□□□□ 0.78
TRAPPC9-206ENST00000519482 HNRNPMP52272 730 aaKnown RBP eCLIP19.9■□□□□ 0.78
TRAPPC9-206ENST00000519482 SPAG9O60271 1321 aaKnown RBP19.89■□□□□ 0.77
TRAPPC9-206ENST00000519482 INO80Q9ULG1 1556 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC9-206ENST00000519482 C3P01024 1663 aa19.88■□□□□ 0.77
TRAPPC9-206ENST00000519482 ATP7AQ04656 1500 aa19.88■□□□□ 0.77
TRAPPC9-206ENST00000519482 SUPT6HQ7KZ85 1726 aaKnown RBP19.87■□□□□ 0.77
TRAPPC9-206ENST00000519482 CEBPAP49715 358 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC9-206ENST00000519482 HSPA2P54652 639 aa19.86■□□□□ 0.77
TRAPPC9-206ENST00000519482 ESF1Q9H501 851 aaKnown RBP19.85■□□□□ 0.77
TRAPPC9-206ENST00000519482 CNTLNQ9NXG0 1405 aa19.84■□□□□ 0.77
TRAPPC9-206ENST00000519482 MROH2AA6NES4 1674 aa19.83■□□□□ 0.76
TRAPPC9-206ENST00000519482 ADGBQ8N7X0 1667 aa19.83■□□□□ 0.76
TRAPPC9-206ENST00000519482 PLXNC1O60486 1568 aa19.83■□□□□ 0.76
TRAPPC9-206ENST00000519482 VPS8Q8N3P4 1428 aa19.81■□□□□ 0.76
TRAPPC9-206ENST00000519482 A2MP01023 1474 aa19.8■□□□□ 0.76
TRAPPC9-206ENST00000519482 NCOA2Q15596 1464 aa19.8■□□□□ 0.76
TRAPPC9-206ENST00000519482 MBD5Q9P267 1494 aa19.8■□□□□ 0.76
TRAPPC9-206ENST00000519482 UHRF1BP1Q6BDS2 1440 aa19.8■□□□□ 0.76
TRAPPC9-206ENST00000519482 LOC105371045A0A1W2PR82 267 aa19.8■□□□□ 0.76
TRAPPC9-206ENST00000519482 ZNF644Q9H582 1327 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC9-206ENST00000519482 RTEL1-TNFRSF6BF6WH68 1400 aa19.77■□□□□ 0.76
TRAPPC9-206ENST00000519482 FBXO41Q8TF61 875 aa19.76■□□□□ 0.75
TRAPPC9-206ENST00000519482 STRCQ7RTU9 1775 aa19.75■□□□□ 0.75
TRAPPC9-206ENST00000519482 MAP3K1Q13233 1512 aa19.75■□□□□ 0.75
TRAPPC9-206ENST00000519482 CLTCQ00610 1675 aaKnown RBP19.75■□□□□ 0.75
TRAPPC9-206ENST00000519482 CAMSAP2Q08AD1 1489 aa19.74■□□□□ 0.75
TRAPPC9-206ENST00000519482 LRRC9Q6ZRR7 1453 aa19.74■□□□□ 0.75
TRAPPC9-206ENST00000519482 CCDC141Q6ZP82 1450 aa19.73■□□□□ 0.75
TRAPPC9-206ENST00000519482 RSPH4AQ5TD94 716 aa19.73■□□□□ 0.75
TRAPPC9-206ENST00000519482 NPATQ14207 1427 aa19.72■□□□□ 0.75
TRAPPC9-206ENST00000519482 ZMYM3Q14202 1370 aa19.71■□□□□ 0.75
TRAPPC9-206ENST00000519482 ARHGEF5Q12774 1597 aa19.71■□□□□ 0.75
TRAPPC9-206ENST00000519482 PPP6R1Q9UPN7 881 aa19.71■□□□□ 0.75
TRAPPC9-206ENST00000519482 DMRT2Q9Y5R5 561 aa19.7■□□□□ 0.74
TRAPPC9-206ENST00000519482 DHX29Q7Z478 1369 aaKnown RBP19.69■□□□□ 0.74
TRAPPC9-206ENST00000519482 GGT6Q6P531 493 aa19.68■□□□□ 0.74
TRAPPC9-206ENST00000519482 ZNF142P52746 1687 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC9-206ENST00000519482 MYO3AQ8NEV4 1616 aa19.63■□□□□ 0.73
TRAPPC9-206ENST00000519482 FAM135AQ9P2D6 1515 aa19.63■□□□□ 0.73
TRAPPC9-206ENST00000519482 PTPRTO14522 1441 aa19.63■□□□□ 0.73
TRAPPC9-206ENST00000519482 KANK4Q5T7N3 995 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC9-206ENST00000519482 PTPRKQ15262 1439 aa19.62■□□□□ 0.73
TRAPPC9-206ENST00000519482 MIA2Q96PC5 1412 aa19.62■□□□□ 0.73
TRAPPC9-206ENST00000519482 TSPY4P0CV99 314 aa19.62■□□□□ 0.73
TRAPPC9-206ENST00000519482 TSPY10P0CW01 314 aa19.62■□□□□ 0.73
TRAPPC9-206ENST00000519482 CERKQ8TCT0 537 aa19.62■□□□□ 0.73
TRAPPC9-206ENST00000519482 MAST1Q9Y2H9 1570 aa19.61■□□□□ 0.73
TRAPPC9-206ENST00000519482 MYOM3Q5VTT5 1437 aa19.61■□□□□ 0.73
TRAPPC9-206ENST00000519482 NCOA1Q15788 1441 aa19.6■□□□□ 0.73
TRAPPC9-206ENST00000519482 CAMSAP1Q5T5Y3 1602 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms