RNA–Protein interactions for RNA: ENST00000519221.5

MCPH1-202, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-202ENST00000519221 SCAPERQ9BY12 1400 aa20.45■□□□□ 0.86
MCPH1-202ENST00000519221 MAGI2Q86UL8 1455 aa20.45■□□□□ 0.86
MCPH1-202ENST00000519221 ARHGAP5Q13017 1502 aa20.45■□□□□ 0.86
MCPH1-202ENST00000519221 PREX2Q70Z35 1606 aa20.45■□□□□ 0.86
MCPH1-202ENST00000519221 POGZQ7Z3K3 1410 aa20.44■□□□□ 0.86
MCPH1-202ENST00000519221 CDC42BPAQ5VT25 1732 aa20.41■□□□□ 0.86
MCPH1-202ENST00000519221 ZFYVE16Q7Z3T8 1539 aa20.41■□□□□ 0.86
MCPH1-202ENST00000519221 ADAMTSL3P82987 1691 aa20.39■□□□□ 0.86
MCPH1-202ENST00000519221 ZNF518AQ6AHZ1 1483 aa20.38■□□□□ 0.85
MCPH1-202ENST00000519221 BCORL1Q5H9F3 1711 aa20.38■□□□□ 0.85
MCPH1-202ENST00000519221 MTUS2Q5JR59 1369 aa20.35■□□□□ 0.85
MCPH1-202ENST00000519221 KDM5CP41229 1560 aa20.35■□□□□ 0.85
MCPH1-202ENST00000519221 YEATS2Q9ULM3 1422 aa20.35■□□□□ 0.85
MCPH1-202ENST00000519221 ABCC1P33527 1531 aa20.34■□□□□ 0.85
MCPH1-202ENST00000519221 LOC105371045A0A1W2PR82 267 aa20.34■□□□□ 0.85
MCPH1-202ENST00000519221 EHBP1L1Q8N3D4 1523 aa20.33■□□□□ 0.85
MCPH1-202ENST00000519221 ARID4BQ4LE39 1312 aaPredicted RBP20.33■□□□□ 0.85
MCPH1-202ENST00000519221 ITSN2Q9NZM3 1697 aa20.32■□□□□ 0.84
MCPH1-202ENST00000519221 GPATCH8Q9UKJ3 1502 aaKnown RBP20.32■□□□□ 0.84
MCPH1-202ENST00000519221 ATP10AO60312 1499 aa20.3■□□□□ 0.84
MCPH1-202ENST00000519221 HECW2Q9P2P5 1572 aa20.3■□□□□ 0.84
MCPH1-202ENST00000519221 VPS8Q8N3P4 1428 aa20.29■□□□□ 0.84
MCPH1-202ENST00000519221 AFAP1Q8N556 730 aa20.28■□□□□ 0.84
MCPH1-202ENST00000519221 CCNB3Q8WWL7 1395 aa20.28■□□□□ 0.84
MCPH1-202ENST00000519221 MLH3Q9UHC1 1453 aa20.28■□□□□ 0.84
MCPH1-202ENST00000519221 C9orf84Q5VXU9 1444 aa20.27■□□□□ 0.84
MCPH1-202ENST00000519221 ARHGEF12Q9NZN5 1544 aa20.27■□□□□ 0.84
MCPH1-202ENST00000519221 MADDQ8WXG6 1647 aa20.27■□□□□ 0.84
MCPH1-202ENST00000519221 SIGLEC1Q9BZZ2 1709 aa20.27■□□□□ 0.84
MCPH1-202ENST00000519221 SAMD9LQ8IVG5 1584 aa20.27■□□□□ 0.84
MCPH1-202ENST00000519221 PTPRMP28827 1452 aa20.27■□□□□ 0.84
MCPH1-202ENST00000519221 PLEKHH2Q8IVE3 1493 aa20.26■□□□□ 0.83
MCPH1-202ENST00000519221 TRAPPC8Q9Y2L5 1435 aa20.26■□□□□ 0.83
MCPH1-202ENST00000519221 TIAM1Q13009 1591 aa20.25■□□□□ 0.83
MCPH1-202ENST00000519221 CFDP1Q9UEE9 299 aaPredicted RBP20.24■□□□□ 0.83
MCPH1-202ENST00000519221 REREQ9P2R6 1566 aa20.24■□□□□ 0.83
MCPH1-202ENST00000519221 DIP2CQ9Y2E4 1556 aa20.24■□□□□ 0.83
MCPH1-202ENST00000519221 SUPT6HQ7KZ85 1726 aaKnown RBP20.24■□□□□ 0.83
MCPH1-202ENST00000519221 KIAA1107Q9UPP5 1409 aa20.23■□□□□ 0.83
MCPH1-202ENST00000519221 RIMS1Q86UR5 1692 aaKnown RBP20.22■□□□□ 0.83
MCPH1-202ENST00000519221 ZNF777Q9ULD5 760 aaPredicted RBP20.22■□□□□ 0.83
MCPH1-202ENST00000519221 SYCP2Q9BX26 1530 aa20.22■□□□□ 0.83
MCPH1-202ENST00000519221 KIDINS220Q9ULH0 1771 aa20.21■□□□□ 0.83
MCPH1-202ENST00000519221 ABCA6Q8N139 1617 aa20.21■□□□□ 0.83
MCPH1-202ENST00000519221 FER1L4A9Z1Z3 1794 aa20.21■□□□□ 0.83
MCPH1-202ENST00000519221 MYT1LQ9UL68 1186 aa20.2■□□□□ 0.82
MCPH1-202ENST00000519221 MAP3K1Q13233 1512 aa20.2■□□□□ 0.82
MCPH1-202ENST00000519221 NCOA2Q15596 1464 aa20.17■□□□□ 0.82
MCPH1-202ENST00000519221 AGLP35573 1532 aa20.17■□□□□ 0.82
MCPH1-202ENST00000519221 HNRNPMP52272 730 aaKnown RBP eCLIP20.15■□□□□ 0.825e-7■■■■■ 37.1
MCPH1-202ENST00000519221 LRRC9Q6ZRR7 1453 aa20.15■□□□□ 0.82
MCPH1-202ENST00000519221 SPAG9O60271 1321 aaKnown RBP20.14■□□□□ 0.81
MCPH1-202ENST00000519221 MLECQ14165 292 aa20.13■□□□□ 0.81
MCPH1-202ENST00000519221 INO80Q9ULG1 1556 aaPredicted RBP20.12■□□□□ 0.81
MCPH1-202ENST00000519221 ATP7AQ04656 1500 aa20.12■□□□□ 0.81
MCPH1-202ENST00000519221 MBD5Q9P267 1494 aa20.1■□□□□ 0.81
MCPH1-202ENST00000519221 SETD1BQ9UPS6 1966 aaKnown RBP20.08■□□□□ 0.81
MCPH1-202ENST00000519221 ZNF644Q9H582 1327 aaPredicted RBP20.08■□□□□ 0.81
MCPH1-202ENST00000519221 ADGBQ8N7X0 1667 aa20.07■□□□□ 0.8
MCPH1-202ENST00000519221 CAMSAP2Q08AD1 1489 aa20.06■□□□□ 0.8
MCPH1-202ENST00000519221 RSPH4AQ5TD94 716 aa20.06■□□□□ 0.8
MCPH1-202ENST00000519221 RTEL1-TNFRSF6BF6WH68 1400 aa20.05■□□□□ 0.8
MCPH1-202ENST00000519221 PLXNC1O60486 1568 aa20.04■□□□□ 0.8
MCPH1-202ENST00000519221 CCDC141Q6ZP82 1450 aa20.04■□□□□ 0.8
MCPH1-202ENST00000519221 LMTK3Q96Q04 1460 aa20.04■□□□□ 0.8
MCPH1-202ENST00000519221 APLP2Q06481 763 aa20.03■□□□□ 0.8
MCPH1-202ENST00000519221 KANK4Q5T7N3 995 aaPredicted RBP20.03■□□□□ 0.8
MCPH1-202ENST00000519221 A2MP01023 1474 aa20.03■□□□□ 0.8
MCPH1-202ENST00000519221 ARHGEF5Q12774 1597 aa20.02■□□□□ 0.8
MCPH1-202ENST00000519221 MIA2Q96PC5 1412 aa20.01■□□□□ 0.79
MCPH1-202ENST00000519221 CNTLNQ9NXG0 1405 aa20.01■□□□□ 0.79
MCPH1-202ENST00000519221 ESF1Q9H501 851 aaKnown RBP20■□□□□ 0.79
MCPH1-202ENST00000519221 MYOM3Q5VTT5 1437 aa20■□□□□ 0.79
MCPH1-202ENST00000519221 PREX1Q8TCU6 1659 aa19.99■□□□□ 0.79
MCPH1-202ENST00000519221 MROH2AA6NES4 1674 aa19.98■□□□□ 0.79
MCPH1-202ENST00000519221 C3P01024 1663 aa19.98■□□□□ 0.79
MCPH1-202ENST00000519221 ILDR1Q86SU0 546 aaPredicted RBP19.98■□□□□ 0.79
MCPH1-202ENST00000519221 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
MCPH1-202ENST00000519221 TSPY4P0CV99 314 aa19.94■□□□□ 0.78
MCPH1-202ENST00000519221 TSPY10P0CW01 314 aa19.94■□□□□ 0.78
MCPH1-202ENST00000519221 CEBPAP49715 358 aaPredicted RBP19.94■□□□□ 0.78
MCPH1-202ENST00000519221 PPP6R1Q9UPN7 881 aa19.94■□□□□ 0.78
MCPH1-202ENST00000519221 DHX29Q7Z478 1369 aaKnown RBP19.94■□□□□ 0.78
MCPH1-202ENST00000519221 MAST1Q9Y2H9 1570 aa19.93■□□□□ 0.78
MCPH1-202ENST00000519221 CLTCQ00610 1675 aaKnown RBP19.9■□□□□ 0.78
MCPH1-202ENST00000519221 UHRF1BP1Q6BDS2 1440 aa19.89■□□□□ 0.77
MCPH1-202ENST00000519221 FAM135AQ9P2D6 1515 aa19.88■□□□□ 0.77
MCPH1-202ENST00000519221 NPATQ14207 1427 aa19.88■□□□□ 0.77
MCPH1-202ENST00000519221 ZMYM3Q14202 1370 aa19.87■□□□□ 0.77
MCPH1-202ENST00000519221 GGT6Q6P531 493 aa19.87■□□□□ 0.77
MCPH1-202ENST00000519221 PTPN23Q9H3S7 1636 aa19.87■□□□□ 0.77
MCPH1-202ENST00000519221 HSPA2P54652 639 aa19.86■□□□□ 0.77
MCPH1-202ENST00000519221 FGD6Q6ZV73 1430 aa19.85■□□□□ 0.77
MCPH1-202ENST00000519221 CROCC2H7BZ55 1655 aa19.84■□□□□ 0.77
MCPH1-202ENST00000519221 KIF3BO15066 747 aa19.83■□□□□ 0.77
MCPH1-202ENST00000519221 TCOF1Q13428 1488 aaKnown RBP19.83■□□□□ 0.76
MCPH1-202ENST00000519221 SHANK2Q9UPX8 1470 aa19.83■□□□□ 0.76
MCPH1-202ENST00000519221 EIF2AK4Q9P2K8 1649 aaKnown RBP19.81■□□□□ 0.76
MCPH1-202ENST00000519221 DNMT1P26358 1616 aaKnown RBP19.8■□□□□ 0.76
MCPH1-202ENST00000519221 KDM5DQ9BY66 1539 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms