RNA–Protein interactions for RNA: ENST00000519212.1

SNX16-206, Transcript of sorting nexin 16, humanhuman

TSL 3

Gene SNX16, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16-206ENST00000519212 VSIG10Q8N0Z9 540 aa13.47□□□□□ -0.25
SNX16-206ENST00000519212 CRISPLD2Q9H0B8 497 aa13.45□□□□□ -0.26
SNX16-206ENST00000519212 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.45□□□□□ -0.26
SNX16-206ENST00000519212 LHX8Q68G74 356 aa13.44□□□□□ -0.26
SNX16-206ENST00000519212 LARP6Q9BRS8 491 aaKnown RBP13.44□□□□□ -0.26
SNX16-206ENST00000519212 PDE4AP27815 886 aa13.43□□□□□ -0.26
SNX16-206ENST00000519212 C2orf72A6NCS6 295 aa13.42□□□□□ -0.26
SNX16-206ENST00000519212 TMC2Q8TDI7 906 aa13.41□□□□□ -0.26
SNX16-206ENST00000519212 GPHNQ9NQX3 736 aaPredicted RBP13.41□□□□□ -0.26
SNX16-206ENST00000519212 KIF3CO14782 793 aa13.4□□□□□ -0.26
SNX16-206ENST00000519212 OTUD5Q96G74 571 aa13.38□□□□□ -0.27
SNX16-206ENST00000519212 SCUBE2Q9NQ36 999 aa13.38□□□□□ -0.27
SNX16-206ENST00000519212 MAMSTRQ6ZN01 415 aa13.37□□□□□ -0.27
SNX16-206ENST00000519212 DSG2Q14126 1118 aa13.36□□□□□ -0.27
SNX16-206ENST00000519212 DDX27Q96GQ7 796 aaKnown RBP13.36□□□□□ -0.27
SNX16-206ENST00000519212 WDR70Q9NW82 654 aa13.36□□□□□ -0.27
SNX16-206ENST00000519212 MFSD10Q14728 455 aa13.35□□□□□ -0.27
SNX16-206ENST00000519212 SLAIN1Q8ND83 568 aa13.35□□□□□ -0.27
SNX16-206ENST00000519212 PPP1R15BQ5SWA1 713 aa13.33□□□□□ -0.28
SNX16-206ENST00000519212 FOXK1P85037 733 aa13.32□□□□□ -0.28
SNX16-206ENST00000519212 PLPP6Q8IY26 295 aa13.31□□□□□ -0.28
SNX16-206ENST00000519212 E2F4Q16254 413 aa13.24□□□□□ -0.29
SNX16-206ENST00000519212 KCNV2Q8TDN2 545 aa13.22□□□□□ -0.29
SNX16-206ENST00000519212 CAMK2BQ13554 666 aa13.2□□□□□ -0.3
SNX16-206ENST00000519212 EMILIN3Q9NT22 766 aa13.2□□□□□ -0.3
SNX16-206ENST00000519212 UPF1Q92900 1129 aaKnown RBP eCLIP13.17□□□□□ -0.3
SNX16-206ENST00000519212 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
SNX16-206ENST00000519212 P3H3Q8IVL6 736 aa13.13□□□□□ -0.31
SNX16-206ENST00000519212 DPYSL4O14531 572 aa13.11□□□□□ -0.31
SNX16-206ENST00000519212 SLC34A2O95436 690 aa13.1□□□□□ -0.31
SNX16-206ENST00000519212 OXER1Q8TDS5 423 aa13.1□□□□□ -0.31
SNX16-206ENST00000519212 DOK7Q18PE1 504 aa13.09□□□□□ -0.31
SNX16-206ENST00000519212 PTCD2Q8WV60 388 aaKnown RBP13.09□□□□□ -0.31
SNX16-206ENST00000519212 ARHGEF1Q92888 912 aaKnown RBP13.08□□□□□ -0.32
SNX16-206ENST00000519212 MAP3K9P80192 1104 aa13.07□□□□□ -0.32
SNX16-206ENST00000519212 KHSRPQ92945 711 aaKnown RBP eCLIP13.07□□□□□ -0.32
SNX16-206ENST00000519212 SNPHO15079 494 aa13.06□□□□□ -0.32
SNX16-206ENST00000519212 PCDHGA4Q9Y5G9 962 aa13.06□□□□□ -0.32
SNX16-206ENST00000519212 ZNF710Q8N1W2 664 aa13.05□□□□□ -0.32
SNX16-206ENST00000519212 ARSIQ5FYB1 569 aa13.04□□□□□ -0.32
SNX16-206ENST00000519212 ARIH1Q9Y4X5 557 aaPredicted RBP13.04□□□□□ -0.32
SNX16-206ENST00000519212 TBC1D12O60347 775 aa13.02□□□□□ -0.33
SNX16-206ENST00000519212 GPR153Q6NV75 609 aa13.02□□□□□ -0.33
SNX16-206ENST00000519212 RIMBP2O15034 1052 aa13□□□□□ -0.33
SNX16-206ENST00000519212 EVI5O60447 810 aa12.99□□□□□ -0.33
SNX16-206ENST00000519212 NUDT7P0C024 238 aa12.99□□□□□ -0.33
SNX16-206ENST00000519212 FAM163AQ96GL9 167 aaPredicted RBP12.99□□□□□ -0.33
SNX16-206ENST00000519212 SEMA3EO15041 775 aa12.97□□□□□ -0.33
SNX16-206ENST00000519212 ST18O60284 1047 aa12.97□□□□□ -0.33
SNX16-206ENST00000519212 PDIA6Q15084 440 aa12.97□□□□□ -0.33
SNX16-206ENST00000519212 ZSWIM6Q9HCJ5 1215 aa12.97□□□□□ -0.33
SNX16-206ENST00000519212 NBR1Q14596 966 aa12.96□□□□□ -0.33
SNX16-206ENST00000519212 KDM4FA0A1W2PPD8 638 aa12.94□□□□□ -0.34
SNX16-206ENST00000519212 HOXB1P14653 301 aaPredicted RBP12.94□□□□□ -0.34
SNX16-206ENST00000519212 SPDYE16A6NNV3 312 aaPredicted RBP12.93□□□□□ -0.34
SNX16-206ENST00000519212 BCANQ96GW7 911 aa12.93□□□□□ -0.34
SNX16-206ENST00000519212 MLLT3P42568 568 aaPredicted RBP12.91□□□□□ -0.34
SNX16-206ENST00000519212 LCE2DQ5TA82 110 aaPredicted RBP12.91□□□□□ -0.34
SNX16-206ENST00000519212 ANO8Q9HCE9 1232 aaPredicted RBP12.91□□□□□ -0.34
SNX16-206ENST00000519212 DDX12PQ92771 950 aa12.89□□□□□ -0.35
SNX16-206ENST00000519212 MARVELD3Q96A59 401 aa12.88□□□□□ -0.35
SNX16-206ENST00000519212 LHX6Q9UPM6 363 aa12.88□□□□□ -0.35
SNX16-206ENST00000519212 GRXCR2A6NFK2 248 aa12.87□□□□□ -0.35
SNX16-206ENST00000519212 TESPA1A2RU30 521 aaPredicted RBP12.86□□□□□ -0.35
SNX16-206ENST00000519212 ZNF316A6NFI3 1004 aaPredicted RBP12.85□□□□□ -0.35
SNX16-206ENST00000519212 PTGER2P43116 358 aa12.83□□□□□ -0.36
SNX16-206ENST00000519212 EMP3P54852 163 aa12.81□□□□□ -0.36
SNX16-206ENST00000519212 PCDHGA10Q9Y5H3 936 aa12.8□□□□□ -0.36
SNX16-206ENST00000519212 PRIM1P49642 420 aaKnown RBP12.79□□□□□ -0.36
SNX16-206ENST00000519212 ZNF454Q8N9F8 522 aa12.79□□□□□ -0.36
SNX16-206ENST00000519212 ERBB3P21860 1342 aa12.78□□□□□ -0.36
SNX16-206ENST00000519212 FAM205CA6NFA0 338 aa12.77□□□□□ -0.37
SNX16-206ENST00000519212 OSBPP22059 807 aa12.77□□□□□ -0.37
SNX16-206ENST00000519212 FOSBP53539 338 aa12.77□□□□□ -0.37
SNX16-206ENST00000519212 PHF14O94880 888 aa12.76□□□□□ -0.37
SNX16-206ENST00000519212 JPH4Q96JJ6 628 aa12.76□□□□□ -0.37
SNX16-206ENST00000519212 VARS2Q5ST30 1063 aaKnown RBP12.75□□□□□ -0.37
SNX16-206ENST00000519212 RBM26Q5T8P6 1007 aaKnown RBP12.75□□□□□ -0.37
SNX16-206ENST00000519212 POTEB3A0JP26 581 aa12.74□□□□□ -0.37
SNX16-206ENST00000519212 SMYD5Q6GMV2 418 aa12.74□□□□□ -0.37
SNX16-206ENST00000519212 POTEBQ6S5H4 581 aa12.74□□□□□ -0.37
SNX16-206ENST00000519212 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNX16-206ENST00000519212 RBM33Q96EV2 1170 aaKnown RBP12.74□□□□□ -0.37
SNX16-206ENST00000519212 TYW1BQ6NUM6 668 aa12.72□□□□□ -0.37
SNX16-206ENST00000519212 EPAS1Q99814 870 aa12.72□□□□□ -0.37
SNX16-206ENST00000519212 PPP4R3BQ5MIZ7 849 aa12.71□□□□□ -0.37
SNX16-206ENST00000519212 ZDHHC16Q969W1 377 aa12.71□□□□□ -0.37
SNX16-206ENST00000519212 HS3ST6Q96QI5 342 aa12.71□□□□□ -0.37
SNX16-206ENST00000519212 LMOD2Q6P5Q4 547 aa12.7□□□□□ -0.38
SNX16-206ENST00000519212 ADAM33Q9BZ11 813 aa12.7□□□□□ -0.38
SNX16-206ENST00000519212 PSDA5PKW4 1024 aaPredicted RBP12.69□□□□□ -0.38
SNX16-206ENST00000519212 EN1Q05925 392 aaPredicted RBP12.69□□□□□ -0.38
SNX16-206ENST00000519212 TULP1O00294 542 aaPredicted RBP12.68□□□□□ -0.38
SNX16-206ENST00000519212 TSR1Q2NL82 804 aaKnown RBP12.68□□□□□ -0.38
SNX16-206ENST00000519212 MAP3K7O43318 606 aa12.67□□□□□ -0.38
SNX16-206ENST00000519212 FBXW7Q969H0 707 aa12.67□□□□□ -0.38
SNX16-206ENST00000519212 CDHR5Q9HBB8 845 aa12.65□□□□□ -0.38
SNX16-206ENST00000519212 NUTM2FA1L443 756 aa12.64□□□□□ -0.39
SNX16-206ENST00000519212 POTEEQ6S8J3 1075 aa12.64□□□□□ -0.39
SNX16-206ENST00000519212 C6orf132Q5T0Z8 1188 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms