RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 NLRP6P59044 892 aa9.79□□□□□ -0.84
PCM1-208ENST00000518877 BCL11BQ9C0K0 894 aaPredicted RBP9.79□□□□□ -0.84
PCM1-208ENST00000518877 STK24Q9Y6E0 443 aa9.79□□□□□ -0.84
PCM1-208ENST00000518877 VARS2Q5ST30 1063 aaKnown RBP9.77□□□□□ -0.85
PCM1-208ENST00000518877 ZSWIM6Q9HCJ5 1215 aa9.76□□□□□ -0.85
PCM1-208ENST00000518877 STK25O00506 426 aa9.74□□□□□ -0.85
PCM1-208ENST00000518877 ECM2O94769 699 aaPredicted RBP9.74□□□□□ -0.85
PCM1-208ENST00000518877 FBXO22Q8NEZ5 403 aa9.72□□□□□ -0.85
PCM1-208ENST00000518877 GPR153Q6NV75 609 aa9.71□□□□□ -0.86
PCM1-208ENST00000518877 ARSIQ5FYB1 569 aa9.69□□□□□ -0.86
PCM1-208ENST00000518877 MFRPQ9BY79 579 aa9.69□□□□□ -0.86
PCM1-208ENST00000518877 ZNF687Q8N1G0 1237 aa9.68□□□□□ -0.86
PCM1-208ENST00000518877 RNF166Q96A37 237 aaPredicted RBP9.65□□□□□ -0.86
PCM1-208ENST00000518877 KHSRPQ92945 711 aaKnown RBP eCLIP9.64□□□□□ -0.87
PCM1-208ENST00000518877 C2orf72A6NCS6 295 aa9.63□□□□□ -0.87
PCM1-208ENST00000518877 RGL2O15211 777 aa9.63□□□□□ -0.87
PCM1-208ENST00000518877 ZNF316A6NFI3 1004 aaPredicted RBP9.62□□□□□ -0.87
PCM1-208ENST00000518877 MYT1LQ9UL68 1186 aa9.62□□□□□ -0.87
PCM1-208ENST00000518877 PKD2Q13563 968 aa9.61□□□□□ -0.87
PCM1-208ENST00000518877 TMC2Q8TDI7 906 aa9.6□□□□□ -0.87
PCM1-208ENST00000518877 KIF3CO14782 793 aa9.59□□□□□ -0.87
PCM1-208ENST00000518877 ANKRD13DQ6ZTN6 518 aa9.59□□□□□ -0.87
PCM1-208ENST00000518877 NUDT7P0C024 238 aa9.58□□□□□ -0.88
PCM1-208ENST00000518877 PTGER2P43116 358 aa9.56□□□□□ -0.88
PCM1-208ENST00000518877 PCDHGA4Q9Y5G9 962 aa9.54□□□□□ -0.88
PCM1-208ENST00000518877 LHX6Q9UPM6 363 aa9.53□□□□□ -0.88
PCM1-208ENST00000518877 PPP1R37O75864 691 aa9.52□□□□□ -0.89
PCM1-208ENST00000518877 LSM11P83369 360 aaKnown RBP eCLIP9.52□□□□□ -0.89
PCM1-208ENST00000518877 SLC34A2O95436 690 aa9.51□□□□□ -0.89
PCM1-208ENST00000518877 PBX2P40425 430 aa9.49□□□□□ -0.89
PCM1-208ENST00000518877 AXIN2Q9Y2T1 843 aa9.48□□□□□ -0.89
PCM1-208ENST00000518877 POTEEQ6S8J3 1075 aa9.43□□□□□ -0.9
PCM1-208ENST00000518877 PSDA5PKW4 1024 aaPredicted RBP9.42□□□□□ -0.9
PCM1-208ENST00000518877 PLPP6Q8IY26 295 aa9.42□□□□□ -0.9
PCM1-208ENST00000518877 HS6ST3Q8IZP7 471 aa9.42□□□□□ -0.9
PCM1-208ENST00000518877 CHGAP10645 457 aaKnown RBP9.41□□□□□ -0.9
PCM1-208ENST00000518877 ARHGAP33O14559 1287 aa9.4□□□□□ -0.9
PCM1-208ENST00000518877 FOXK1P85037 733 aa9.4□□□□□ -0.9
PCM1-208ENST00000518877 PTCD2Q8WV60 388 aaKnown RBP9.4□□□□□ -0.9
PCM1-208ENST00000518877 GPHNQ9NQX3 736 aaPredicted RBP9.39□□□□□ -0.91
PCM1-208ENST00000518877 TBC1D12O60347 775 aa9.38□□□□□ -0.91
PCM1-208ENST00000518877 ADGRD1Q6QNK2 874 aa9.37□□□□□ -0.91
PCM1-208ENST00000518877 DSG2Q14126 1118 aa9.36□□□□□ -0.91
PCM1-208ENST00000518877 PPP4R3BQ5MIZ7 849 aa9.35□□□□□ -0.91
PCM1-208ENST00000518877 KDM4FA0A1W2PPD8 638 aa9.33□□□□□ -0.92
PCM1-208ENST00000518877 PSEN2P49810 448 aa9.33□□□□□ -0.92
PCM1-208ENST00000518877 HCSTQ9UBK5 93 aa9.33□□□□□ -0.92
PCM1-208ENST00000518877 DMRTA1Q5VZB9 504 aa9.32□□□□□ -0.92
PCM1-208ENST00000518877 KCNH8Q96L42 1107 aa9.32□□□□□ -0.92
PCM1-208ENST00000518877 STAC3Q96MF2 364 aa9.32□□□□□ -0.92
PCM1-208ENST00000518877 RYDENQ9NUL5 291 aaKnown RBP9.31□□□□□ -0.92
PCM1-208ENST00000518877 TK2O00142 265 aa9.3□□□□□ -0.92
PCM1-208ENST00000518877 UPF1Q92900 1129 aaKnown RBP eCLIP9.3□□□□□ -0.92
PCM1-208ENST00000518877 KCNK17Q96T54 332 aa9.29□□□□□ -0.92
PCM1-208ENST00000518877 PLA2G2EQ9NZK7 142 aa9.29□□□□□ -0.92
PCM1-208ENST00000518877 NKX1-1Q15270 411 aaPredicted RBP9.28□□□□□ -0.92
PCM1-208ENST00000518877 HRO43593 1189 aa9.26□□□□□ -0.93
PCM1-208ENST00000518877 KCTD12Q96CX2 325 aaKnown RBP9.26□□□□□ -0.93
PCM1-208ENST00000518877 PPP1R15BQ5SWA1 713 aa9.25□□□□□ -0.93
PCM1-208ENST00000518877 OXER1Q8TDS5 423 aa9.25□□□□□ -0.93
PCM1-208ENST00000518877 ZNF454Q8N9F8 522 aa9.24□□□□□ -0.93
PCM1-208ENST00000518877 DNAJC5Q9H3Z4 198 aa9.24□□□□□ -0.93
PCM1-208ENST00000518877 CRISPLD2Q9H0B8 497 aa9.23□□□□□ -0.93
PCM1-208ENST00000518877 PDE4AP27815 886 aa9.22□□□□□ -0.93
PCM1-208ENST00000518877 VPS9D1Q9Y2B5 631 aa9.19□□□□□ -0.94
PCM1-208ENST00000518877 DCAF8L2P0C7V8 631 aa9.18□□□□□ -0.94
PCM1-208ENST00000518877 BCL2L12Q9HB09 334 aa9.18□□□□□ -0.94
PCM1-208ENST00000518877 NCKAP5LQ9HCH0 1330 aa9.18□□□□□ -0.94
PCM1-208ENST00000518877 PTPREP23469 700 aa9.17□□□□□ -0.94
PCM1-208ENST00000518877 PTPN5P54829 565 aa9.17□□□□□ -0.94
PCM1-208ENST00000518877 LARP6Q9BRS8 491 aaKnown RBP9.16□□□□□ -0.94
PCM1-208ENST00000518877 GOLGA8CPA6NN73 597 aa9.15□□□□□ -0.94
PCM1-208ENST00000518877 EVI5O60447 810 aa9.15□□□□□ -0.94
PCM1-208ENST00000518877 FOSBP53539 338 aa9.15□□□□□ -0.94
PCM1-208ENST00000518877 DDX27Q96GQ7 796 aaKnown RBP9.15□□□□□ -0.94
PCM1-208ENST00000518877 GTPBP6O43824 516 aaPredicted RBP9.13□□□□□ -0.95
PCM1-208ENST00000518877 MAP3K9P80192 1104 aa9.13□□□□□ -0.95
PCM1-208ENST00000518877 JPH4Q96JJ6 628 aa9.13□□□□□ -0.95
PCM1-208ENST00000518877 ZDHHC16Q969W1 377 aa9.12□□□□□ -0.95
PCM1-208ENST00000518877 SLC4A5Q9BY07 1137 aa9.12□□□□□ -0.95
PCM1-208ENST00000518877 MRPL50Q8N5N7 158 aaKnown RBP9.11□□□□□ -0.95
PCM1-208ENST00000518877 ANO8Q9HCE9 1232 aaPredicted RBP9.11□□□□□ -0.95
PCM1-208ENST00000518877 ZBED2Q9BTP6 218 aa9.1□□□□□ -0.95
PCM1-208ENST00000518877 ADAM33Q9BZ11 813 aa9.1□□□□□ -0.95
PCM1-208ENST00000518877 WNT2BQ93097 391 aa9.09□□□□□ -0.95
PCM1-208ENST00000518877 BHMG1C9JSJ3 638 aaPredicted RBP9.08□□□□□ -0.96
PCM1-208ENST00000518877 THSD4Q6ZMP0 1018 aa9.08□□□□□ -0.96
PCM1-208ENST00000518877 NBPF3Q9H094 633 aa9.08□□□□□ -0.96
PCM1-208ENST00000518877 MFSD10Q14728 455 aa9.06□□□□□ -0.96
PCM1-208ENST00000518877 EMILIN3Q9NT22 766 aa9.05□□□□□ -0.96
PCM1-208ENST00000518877 PPP1R3GB7ZBB8 358 aa9.03□□□□□ -0.96
PCM1-208ENST00000518877 PCDHGA10Q9Y5H3 936 aa9.02□□□□□ -0.97
PCM1-208ENST00000518877 PROX2Q3B8N5 592 aa9□□□□□ -0.97
PCM1-208ENST00000518877 TYW1BQ6NUM6 668 aa9□□□□□ -0.97
PCM1-208ENST00000518877 CADPS2Q86UW7 1296 aa9□□□□□ -0.97
PCM1-208ENST00000518877 PHF14O94880 888 aa8.99□□□□□ -0.97
PCM1-208ENST00000518877 ANKK1Q8NFD2 765 aa8.99□□□□□ -0.97
PCM1-208ENST00000518877 FBXW7Q969H0 707 aa8.99□□□□□ -0.97
PCM1-208ENST00000518877 RABGEF1Q9UJ41 708 aa8.99□□□□□ -0.97
PCM1-208ENST00000518877 COL9A1P20849 921 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms