RNA–Protein interactions for RNA: ENST00000518756.1

HDAC2-204, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 826 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-204ENST00000518756 MFRPQ9BY79 579 aa12.28□□□□□ -0.44
HDAC2-204ENST00000518756 POTEB3A0JP26 581 aa12.27□□□□□ -0.45
HDAC2-204ENST00000518756 POTEBQ6S5H4 581 aa12.27□□□□□ -0.45
HDAC2-204ENST00000518756 HOXB1P14653 301 aaPredicted RBP12.26□□□□□ -0.45
HDAC2-204ENST00000518756 SPNS2Q8IVW8 549 aa12.24□□□□□ -0.45
HDAC2-204ENST00000518756 ERBB3P21860 1342 aa12.23□□□□□ -0.45
HDAC2-204ENST00000518756 MMRN1Q13201 1228 aa12.19□□□□□ -0.46
HDAC2-204ENST00000518756 KRTAP3-3Q9BYR6 98 aa12.19□□□□□ -0.46
HDAC2-204ENST00000518756 KRTAP3-2Q9BYR7 98 aa12.19□□□□□ -0.46
HDAC2-204ENST00000518756 ZSWIM6Q9HCJ5 1215 aa12.18□□□□□ -0.46
HDAC2-204ENST00000518756 VARS2Q5ST30 1063 aaKnown RBP12.16□□□□□ -0.46
HDAC2-204ENST00000518756 C2orf72A6NCS6 295 aa12.12□□□□□ -0.47
HDAC2-204ENST00000518756 GPR153Q6NV75 609 aa12.12□□□□□ -0.47
HDAC2-204ENST00000518756 ARSIQ5FYB1 569 aa12.11□□□□□ -0.47
HDAC2-204ENST00000518756 TMC2Q8TDI7 906 aa12.09□□□□□ -0.47
HDAC2-204ENST00000518756 KIF3CO14782 793 aa12.08□□□□□ -0.48
HDAC2-204ENST00000518756 PPP1R37O75864 691 aa12.07□□□□□ -0.48
HDAC2-204ENST00000518756 HS6ST3Q8IZP7 471 aa12.07□□□□□ -0.48
HDAC2-204ENST00000518756 KHSRPQ92945 711 aaKnown RBP eCLIP12.07□□□□□ -0.482e-7■■■■□ 22
HDAC2-204ENST00000518756 CHGAP10645 457 aaKnown RBP12.06□□□□□ -0.48
HDAC2-204ENST00000518756 AMER1Q5JTC6 1135 aaPredicted RBP12.05□□□□□ -0.48
HDAC2-204ENST00000518756 ZNF687Q8N1G0 1237 aa12.01□□□□□ -0.49
HDAC2-204ENST00000518756 ZNF316A6NFI3 1004 aaPredicted RBP12□□□□□ -0.49
HDAC2-204ENST00000518756 NUDT7P0C024 238 aa11.99□□□□□ -0.49
HDAC2-204ENST00000518756 PCDHGA4Q9Y5G9 962 aa11.97□□□□□ -0.49
HDAC2-204ENST00000518756 SLC34A2O95436 690 aa11.94□□□□□ -0.5
HDAC2-204ENST00000518756 RTN4Q9NQC3 1192 aaKnown RBP11.94□□□□□ -0.5
HDAC2-204ENST00000518756 ANKRD13DQ6ZTN6 518 aa11.91□□□□□ -0.5
HDAC2-204ENST00000518756 RNF166Q96A37 237 aaPredicted RBP11.91□□□□□ -0.5
HDAC2-204ENST00000518756 LHX6Q9UPM6 363 aa11.91□□□□□ -0.5
HDAC2-204ENST00000518756 NKX1-1Q15270 411 aaPredicted RBP11.9□□□□□ -0.5
HDAC2-204ENST00000518756 MYT1LQ9UL68 1186 aa11.89□□□□□ -0.51
HDAC2-204ENST00000518756 PLPP6Q8IY26 295 aa11.88□□□□□ -0.51
HDAC2-204ENST00000518756 GPHNQ9NQX3 736 aaPredicted RBP11.87□□□□□ -0.51
HDAC2-204ENST00000518756 RYDENQ9NUL5 291 aaKnown RBP11.87□□□□□ -0.51
HDAC2-204ENST00000518756 DCAF8L2P0C7V8 631 aa11.86□□□□□ -0.51
HDAC2-204ENST00000518756 FOXK1P85037 733 aa11.86□□□□□ -0.51
HDAC2-204ENST00000518756 LSM11P83369 360 aaKnown RBP eCLIP11.85□□□□□ -0.51
HDAC2-204ENST00000518756 DSG2Q14126 1118 aa11.85□□□□□ -0.51
HDAC2-204ENST00000518756 DNAJC5Q9H3Z4 198 aa11.84□□□□□ -0.51
HDAC2-204ENST00000518756 PBX2P40425 430 aa11.83□□□□□ -0.52
HDAC2-204ENST00000518756 PTGER2P43116 358 aa11.83□□□□□ -0.52
HDAC2-204ENST00000518756 AXIN2Q9Y2T1 843 aa11.83□□□□□ -0.52
HDAC2-204ENST00000518756 PTCD2Q8WV60 388 aaKnown RBP11.82□□□□□ -0.52
HDAC2-204ENST00000518756 PSDA5PKW4 1024 aaPredicted RBP11.79□□□□□ -0.52
HDAC2-204ENST00000518756 TBC1D12O60347 775 aa11.77□□□□□ -0.53
HDAC2-204ENST00000518756 POTEEQ6S8J3 1075 aa11.77□□□□□ -0.53
HDAC2-204ENST00000518756 UPF1Q92900 1129 aaKnown RBP eCLIP11.76□□□□□ -0.53
HDAC2-204ENST00000518756 KDM4FA0A1W2PPD8 638 aa11.73□□□□□ -0.53
HDAC2-204ENST00000518756 ARHGAP33O14559 1287 aa11.73□□□□□ -0.53
HDAC2-204ENST00000518756 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
HDAC2-204ENST00000518756 PPP1R15BQ5SWA1 713 aa11.73□□□□□ -0.53
HDAC2-204ENST00000518756 CRISPLD2Q9H0B8 497 aa11.73□□□□□ -0.53
HDAC2-204ENST00000518756 GTPBP6O43824 516 aaPredicted RBP11.71□□□□□ -0.53
HDAC2-204ENST00000518756 PDE4AP27815 886 aa11.69□□□□□ -0.54
HDAC2-204ENST00000518756 ADGRD1Q6QNK2 874 aa11.69□□□□□ -0.54
HDAC2-204ENST00000518756 OXER1Q8TDS5 423 aa11.69□□□□□ -0.54
HDAC2-204ENST00000518756 NCKAP5LQ9HCH0 1330 aa11.68□□□□□ -0.54
HDAC2-204ENST00000518756 PSEN2P49810 448 aa11.68□□□□□ -0.54
HDAC2-204ENST00000518756 DMRTA1Q5VZB9 504 aa11.65□□□□□ -0.54
HDAC2-204ENST00000518756 KCNH8Q96L42 1107 aa11.65□□□□□ -0.54
HDAC2-204ENST00000518756 LARP6Q9BRS8 491 aaKnown RBP11.65□□□□□ -0.54
HDAC2-204ENST00000518756 KCNK17Q96T54 332 aa11.64□□□□□ -0.55
HDAC2-204ENST00000518756 ZNF454Q8N9F8 522 aa11.63□□□□□ -0.55
HDAC2-204ENST00000518756 DDX27Q96GQ7 796 aaKnown RBP11.63□□□□□ -0.55
HDAC2-204ENST00000518756 TK2O00142 265 aa11.6□□□□□ -0.55
HDAC2-204ENST00000518756 BBXQ8WY36 941 aaPredicted RBP11.58□□□□□ -0.56
HDAC2-204ENST00000518756 STAC3Q96MF2 364 aa11.58□□□□□ -0.56
HDAC2-204ENST00000518756 EVI5O60447 810 aa11.56□□□□□ -0.56
HDAC2-204ENST00000518756 HRO43593 1189 aa11.55□□□□□ -0.56
HDAC2-204ENST00000518756 FOSBP53539 338 aa11.54□□□□□ -0.56
HDAC2-204ENST00000518756 MAP3K9P80192 1104 aa11.54□□□□□ -0.56
HDAC2-204ENST00000518756 MFSD10Q14728 455 aa11.54□□□□□ -0.56
HDAC2-204ENST00000518756 HCSTQ9UBK5 93 aa11.54□□□□□ -0.56
HDAC2-204ENST00000518756 CADPS2Q86UW7 1296 aa11.53□□□□□ -0.56
HDAC2-204ENST00000518756 JPH4Q96JJ6 628 aa11.53□□□□□ -0.56
HDAC2-204ENST00000518756 BCL2L12Q9HB09 334 aa11.53□□□□□ -0.56
HDAC2-204ENST00000518756 PTPREP23469 700 aa11.51□□□□□ -0.57
HDAC2-204ENST00000518756 KCTD12Q96CX2 325 aaKnown RBP11.51□□□□□ -0.57
HDAC2-204ENST00000518756 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.51□□□□□ -0.57
HDAC2-204ENST00000518756 EMILIN3Q9NT22 766 aa11.5□□□□□ -0.57
HDAC2-204ENST00000518756 VPS9D1Q9Y2B5 631 aa11.5□□□□□ -0.57
HDAC2-204ENST00000518756 ANO8Q9HCE9 1232 aaPredicted RBP11.49□□□□□ -0.57
HDAC2-204ENST00000518756 ZDHHC16Q969W1 377 aa11.48□□□□□ -0.57
HDAC2-204ENST00000518756 PLA2G2EQ9NZK7 142 aa11.47□□□□□ -0.57
HDAC2-204ENST00000518756 ADAM33Q9BZ11 813 aa11.46□□□□□ -0.57
HDAC2-204ENST00000518756 SPRYD3Q8NCJ5 442 aa11.43□□□□□ -0.58
HDAC2-204ENST00000518756 ZBED2Q9BTP6 218 aa11.42□□□□□ -0.58
HDAC2-204ENST00000518756 SLC4A5Q9BY07 1137 aa11.42□□□□□ -0.58
HDAC2-204ENST00000518756 GOLGA8CPA6NN73 597 aa11.41□□□□□ -0.58
HDAC2-204ENST00000518756 PTPN5P54829 565 aa11.4□□□□□ -0.58
HDAC2-204ENST00000518756 PCDHGA10Q9Y5H3 936 aa11.4□□□□□ -0.58
HDAC2-204ENST00000518756 MRPL50Q8N5N7 158 aaKnown RBP11.39□□□□□ -0.59
HDAC2-204ENST00000518756 DPYSL4O14531 572 aa11.38□□□□□ -0.59
HDAC2-204ENST00000518756 PPP1R3GB7ZBB8 358 aa11.37□□□□□ -0.59
HDAC2-204ENST00000518756 TYW1BQ6NUM6 668 aa11.37□□□□□ -0.59
HDAC2-204ENST00000518756 PAXIP1Q6ZW49 1069 aaPredicted RBP11.37□□□□□ -0.59
HDAC2-204ENST00000518756 NBPF3Q9H094 633 aa11.37□□□□□ -0.59
HDAC2-204ENST00000518756 BHMG1C9JSJ3 638 aaPredicted RBP11.35□□□□□ -0.59
HDAC2-204ENST00000518756 PHF14O94880 888 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms