RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 PTGER2P43116 358 aa13.46□□□□□ -0.25
CCDC6-203ENST00000518638 TMEM92Q6UXU6 159 aa13.45□□□□□ -0.26
CCDC6-203ENST00000518638 GPR153Q6NV75 609 aa13.43□□□□□ -0.26
CCDC6-203ENST00000518638 SOX12O15370 315 aa13.39□□□□□ -0.27
CCDC6-203ENST00000518638 MS4A4AQ96JQ5 239 aa13.34□□□□□ -0.27
CCDC6-203ENST00000518638 UNC13AQ9UPW8 1703 aa13.33□□□□□ -0.28
CCDC6-203ENST00000518638 ARSIQ5FYB1 569 aa13.32□□□□□ -0.28
CCDC6-203ENST00000518638 ANKRD13DQ6ZTN6 518 aa13.32□□□□□ -0.28
CCDC6-203ENST00000518638 RIOK3O14730 519 aaKnown RBP13.3□□□□□ -0.28
CCDC6-203ENST00000518638 PHF8Q9UPP1 1060 aa13.3□□□□□ -0.28
CCDC6-203ENST00000518638 ZNF316A6NFI3 1004 aaPredicted RBP13.29□□□□□ -0.28
CCDC6-203ENST00000518638 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.27□□□□□ -0.29
CCDC6-203ENST00000518638 LSM11P83369 360 aaKnown RBP eCLIP13.27□□□□□ -0.29
CCDC6-203ENST00000518638 ZFP91Q96JP5 570 aaPredicted RBP13.27□□□□□ -0.29
CCDC6-203ENST00000518638 VGFO15240 615 aaPredicted RBP13.25□□□□□ -0.29
CCDC6-203ENST00000518638 MYO15BQ96JP2 1530 aa13.24□□□□□ -0.29
CCDC6-203ENST00000518638 KHSRPQ92945 711 aaKnown RBP eCLIP13.23□□□□□ -0.29
CCDC6-203ENST00000518638 RNF25Q96BH1 459 aaPredicted RBP13.23□□□□□ -0.29
CCDC6-203ENST00000518638 BICRAQ9NZM4 1560 aa13.22□□□□□ -0.29
CCDC6-203ENST00000518638 SHROOM4Q9ULL8 1493 aa13.19□□□□□ -0.3
CCDC6-203ENST00000518638 PBX2P40425 430 aa13.19□□□□□ -0.3
CCDC6-203ENST00000518638 NLRP6P59044 892 aa13.19□□□□□ -0.3
CCDC6-203ENST00000518638 DCAF8L2P0C7V8 631 aa13.18□□□□□ -0.3
CCDC6-203ENST00000518638 FBXO22Q8NEZ5 403 aa13.13□□□□□ -0.31
CCDC6-203ENST00000518638 NUDT7P0C024 238 aa13.12□□□□□ -0.31
CCDC6-203ENST00000518638 AMER1Q5JTC6 1135 aaPredicted RBP13.12□□□□□ -0.31
CCDC6-203ENST00000518638 CECR2Q9BXF3 1484 aa13.1□□□□□ -0.31
CCDC6-203ENST00000518638 PLA2G2EQ9NZK7 142 aa13.1□□□□□ -0.31
CCDC6-203ENST00000518638 KIF3CO14782 793 aa13.09□□□□□ -0.31
CCDC6-203ENST00000518638 C2orf72A6NCS6 295 aa13.08□□□□□ -0.32
CCDC6-203ENST00000518638 BCL11BQ9C0K0 894 aaPredicted RBP13.08□□□□□ -0.32
CCDC6-203ENST00000518638 HCSTQ9UBK5 93 aa13.08□□□□□ -0.32
CCDC6-203ENST00000518638 TAOK2Q9UL54 1235 aa13.08□□□□□ -0.32
CCDC6-203ENST00000518638 CC2D2AQ9P2K1 1620 aa13.07□□□□□ -0.32
CCDC6-203ENST00000518638 LHX6Q9UPM6 363 aa13.07□□□□□ -0.32
CCDC6-203ENST00000518638 DNAJC5Q9H3Z4 198 aa13.06□□□□□ -0.32
CCDC6-203ENST00000518638 AXIN2Q9Y2T1 843 aa13.06□□□□□ -0.32
CCDC6-203ENST00000518638 POTEEQ6S8J3 1075 aa13.05□□□□□ -0.32
CCDC6-203ENST00000518638 SLC34A2O95436 690 aa13.04□□□□□ -0.32
CCDC6-203ENST00000518638 RTN4Q9NQC3 1192 aaKnown RBP13.04□□□□□ -0.32
CCDC6-203ENST00000518638 PCDHGA4Q9Y5G9 962 aa13.04□□□□□ -0.32
CCDC6-203ENST00000518638 MFRPQ9BY79 579 aa13.03□□□□□ -0.32
CCDC6-203ENST00000518638 STK24Q9Y6E0 443 aa13.03□□□□□ -0.32
CCDC6-203ENST00000518638 ADGRD1Q6QNK2 874 aa12.99□□□□□ -0.33
CCDC6-203ENST00000518638 PSDA5PKW4 1024 aaPredicted RBP12.97□□□□□ -0.33
CCDC6-203ENST00000518638 PKD2Q13563 968 aa12.97□□□□□ -0.33
CCDC6-203ENST00000518638 TMC2Q8TDI7 906 aa12.97□□□□□ -0.33
CCDC6-203ENST00000518638 EIF4G1Q04637 1599 aaKnown RBP12.97□□□□□ -0.33
CCDC6-203ENST00000518638 ARHGAP33O14559 1287 aa12.96□□□□□ -0.33
CCDC6-203ENST00000518638 STK25O00506 426 aa12.94□□□□□ -0.34
CCDC6-203ENST00000518638 TK2O00142 265 aa12.91□□□□□ -0.34
CCDC6-203ENST00000518638 DCAF1Q9Y4B6 1507 aa12.91□□□□□ -0.34
CCDC6-203ENST00000518638 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
CCDC6-203ENST00000518638 HRO43593 1189 aa12.85□□□□□ -0.35
CCDC6-203ENST00000518638 DMRTA1Q5VZB9 504 aa12.83□□□□□ -0.36
CCDC6-203ENST00000518638 ZCCHC6Q5VYS8 1495 aaKnown RBP12.83□□□□□ -0.36
CCDC6-203ENST00000518638 SCRIBQ14160 1630 aa12.82□□□□□ -0.36
CCDC6-203ENST00000518638 KDM4FA0A1W2PPD8 638 aa12.82□□□□□ -0.36
CCDC6-203ENST00000518638 KCTD12Q96CX2 325 aaKnown RBP12.82□□□□□ -0.36
CCDC6-203ENST00000518638 PSEN2P49810 448 aa12.81□□□□□ -0.36
CCDC6-203ENST00000518638 PTCD2Q8WV60 388 aaKnown RBP12.81□□□□□ -0.36
CCDC6-203ENST00000518638 PPP4R3BQ5MIZ7 849 aa12.8□□□□□ -0.36
CCDC6-203ENST00000518638 STAC3Q96MF2 364 aa12.8□□□□□ -0.36
CCDC6-203ENST00000518638 KCNH8Q96L42 1107 aa12.76□□□□□ -0.37
CCDC6-203ENST00000518638 CUX2O14529 1486 aa12.74□□□□□ -0.37
CCDC6-203ENST00000518638 RGL2O15211 777 aa12.74□□□□□ -0.37
CCDC6-203ENST00000518638 PPP1R37O75864 691 aa12.73□□□□□ -0.37
CCDC6-203ENST00000518638 FOXK1P85037 733 aa12.71□□□□□ -0.37
CCDC6-203ENST00000518638 KCNK17Q96T54 332 aa12.71□□□□□ -0.37
CCDC6-203ENST00000518638 TBC1D12O60347 775 aa12.7□□□□□ -0.38
CCDC6-203ENST00000518638 PLPP6Q8IY26 295 aa12.7□□□□□ -0.38
CCDC6-203ENST00000518638 RGS20O76081 388 aa12.69□□□□□ -0.38
CCDC6-203ENST00000518638 PTPN5P54829 565 aa12.66□□□□□ -0.38
CCDC6-203ENST00000518638 GPHNQ9NQX3 736 aaPredicted RBP12.66□□□□□ -0.38
CCDC6-203ENST00000518638 VPS9D1Q9Y2B5 631 aa12.66□□□□□ -0.38
CCDC6-203ENST00000518638 IFFO2Q5TF58 517 aa12.65□□□□□ -0.38
CCDC6-203ENST00000518638 IRX2Q9BZI1 471 aaPredicted RBP12.63□□□□□ -0.39
CCDC6-203ENST00000518638 DSG2Q14126 1118 aa12.62□□□□□ -0.39
CCDC6-203ENST00000518638 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
CCDC6-203ENST00000518638 SLC4A5Q9BY07 1137 aa12.58□□□□□ -0.4
CCDC6-203ENST00000518638 THSD4Q6ZMP0 1018 aa12.57□□□□□ -0.4
CCDC6-203ENST00000518638 A0A0G2JS52 829 aa12.56□□□□□ -0.4
CCDC6-203ENST00000518638 ZNF454Q8N9F8 522 aa12.56□□□□□ -0.4
CCDC6-203ENST00000518638 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
CCDC6-203ENST00000518638 GOLGA8CPA6NN73 597 aa12.54□□□□□ -0.4
CCDC6-203ENST00000518638 OXER1Q8TDS5 423 aa12.53□□□□□ -0.4
CCDC6-203ENST00000518638 BHMG1C9JSJ3 638 aaPredicted RBP12.51□□□□□ -0.41
CCDC6-203ENST00000518638 WNT2BQ93097 391 aa12.51□□□□□ -0.41
CCDC6-203ENST00000518638 PTPREP23469 700 aa12.5□□□□□ -0.41
CCDC6-203ENST00000518638 HS6ST3Q8IZP7 471 aa12.5□□□□□ -0.41
CCDC6-203ENST00000518638 UPF1Q92900 1129 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCDC6-203ENST00000518638 CHGAP10645 457 aaKnown RBP12.49□□□□□ -0.41
CCDC6-203ENST00000518638 MRPL50Q8N5N7 158 aaKnown RBP12.49□□□□□ -0.41
CCDC6-203ENST00000518638 FOSBP53539 338 aa12.47□□□□□ -0.41
CCDC6-203ENST00000518638 ZBED2Q9BTP6 218 aa12.47□□□□□ -0.41
CCDC6-203ENST00000518638 NBPF3Q9H094 633 aa12.46□□□□□ -0.41
CCDC6-203ENST00000518638 NCAPD3P42695 1498 aa12.44□□□□□ -0.42
CCDC6-203ENST00000518638 JPH4Q96JJ6 628 aa12.41□□□□□ -0.42
CCDC6-203ENST00000518638 PPP1R15BQ5SWA1 713 aa12.39□□□□□ -0.43
CCDC6-203ENST00000518638 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms