RNA–Protein interactions for RNA: ENST00000518110.1

SREK1-204, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 763 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-204ENST00000518110 TMEM121BQ9BXQ6 578 aaPredicted RBP12.64□□□□□ -0.39
SREK1-204ENST00000518110 ST18O60284 1047 aa12.61□□□□□ -0.39
SREK1-204ENST00000518110 MICALL2Q8IY33 904 aa12.6□□□□□ -0.39
SREK1-204ENST00000518110 C3orf67Q6ZVT6 689 aa12.59□□□□□ -0.39
SREK1-204ENST00000518110 BOLA1Q9Y3E2 137 aa12.59□□□□□ -0.39
SREK1-204ENST00000518110 SNPHO15079 494 aa12.57□□□□□ -0.4
SREK1-204ENST00000518110 CADPS2Q86UW7 1296 aa12.51□□□□□ -0.41
SREK1-204ENST00000518110 CDAN1Q8IWY9 1227 aa12.49□□□□□ -0.41
SREK1-204ENST00000518110 TSHZ2Q9NRE2 1034 aa12.49□□□□□ -0.41
SREK1-204ENST00000518110 G3V3G9 751 aa12.47□□□□□ -0.41
SREK1-204ENST00000518110 TMEM92Q6UXU6 159 aa12.47□□□□□ -0.41
SREK1-204ENST00000518110 NCKAP5LQ9HCH0 1330 aa12.45□□□□□ -0.42
SREK1-204ENST00000518110 KIF3CO14782 793 aa12.45□□□□□ -0.42
SREK1-204ENST00000518110 CRISPLD2Q9H0B8 497 aa12.45□□□□□ -0.42
SREK1-204ENST00000518110 HAP1P54257 671 aaPredicted RBP12.43□□□□□ -0.42
SREK1-204ENST00000518110 MARVELD3Q96A59 401 aa12.39□□□□□ -0.43
SREK1-204ENST00000518110 MFSD10Q14728 455 aa12.37□□□□□ -0.43
SREK1-204ENST00000518110 GPHNQ9NQX3 736 aaPredicted RBP12.37□□□□□ -0.43
SREK1-204ENST00000518110 C2orf72A6NCS6 295 aa12.36□□□□□ -0.43
SREK1-204ENST00000518110 SLC24A1O60721 1099 aa12.34□□□□□ -0.43
SREK1-204ENST00000518110 HOXB3P14651 431 aaPredicted RBP12.34□□□□□ -0.43
SREK1-204ENST00000518110 PDE4AP27815 886 aa12.32□□□□□ -0.44
SREK1-204ENST00000518110 EMP3P54852 163 aa12.32□□□□□ -0.44
SREK1-204ENST00000518110 FOXK1P85037 733 aa12.32□□□□□ -0.44
SREK1-204ENST00000518110 KDM2AQ9Y2K7 1162 aa12.32□□□□□ -0.44
SREK1-204ENST00000518110 TMC2Q8TDI7 906 aa12.31□□□□□ -0.44
SREK1-204ENST00000518110 VSIG10Q8N0Z9 540 aa12.3□□□□□ -0.44
SREK1-204ENST00000518110 DSG2Q14126 1118 aa12.29□□□□□ -0.44
SREK1-204ENST00000518110 DDX27Q96GQ7 796 aaKnown RBP12.28□□□□□ -0.44
SREK1-204ENST00000518110 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
SREK1-204ENST00000518110 PPP1R15BQ5SWA1 713 aa12.27□□□□□ -0.45
SREK1-204ENST00000518110 DOK7Q18PE1 504 aa12.26□□□□□ -0.45
SREK1-204ENST00000518110 POTEB3A0JP26 581 aa12.24□□□□□ -0.45
SREK1-204ENST00000518110 POTEBQ6S5H4 581 aa12.24□□□□□ -0.45
SREK1-204ENST00000518110 HS3ST6Q96QI5 342 aa12.24□□□□□ -0.45
SREK1-204ENST00000518110 FAM205CA6NFA0 338 aa12.23□□□□□ -0.45
SREK1-204ENST00000518110 HOXB1P14653 301 aaPredicted RBP12.23□□□□□ -0.45
SREK1-204ENST00000518110 CAMK2BQ13554 666 aa12.23□□□□□ -0.45
SREK1-204ENST00000518110 ZNF710Q8N1W2 664 aa12.23□□□□□ -0.45
SREK1-204ENST00000518110 PLPP6Q8IY26 295 aa12.22□□□□□ -0.45
SREK1-204ENST00000518110 SPNS2Q8IVW8 549 aa12.19□□□□□ -0.46
SREK1-204ENST00000518110 RIMBP2O15034 1052 aa12.18□□□□□ -0.46
SREK1-204ENST00000518110 SLC34A2O95436 690 aa12.18□□□□□ -0.46
SREK1-204ENST00000518110 KRTAP3-3Q9BYR6 98 aa12.16□□□□□ -0.46
SREK1-204ENST00000518110 KRTAP3-2Q9BYR7 98 aa12.16□□□□□ -0.46
SREK1-204ENST00000518110 ZSWIM6Q9HCJ5 1215 aa12.16□□□□□ -0.46
SREK1-204ENST00000518110 EMILIN3Q9NT22 766 aa12.15□□□□□ -0.46
SREK1-204ENST00000518110 WDR70Q9NW82 654 aa12.15□□□□□ -0.46
SREK1-204ENST00000518110 E2F4Q16254 413 aa12.14□□□□□ -0.47
SREK1-204ENST00000518110 MMRN1Q13201 1228 aa12.13□□□□□ -0.47
SREK1-204ENST00000518110 KCNV2Q8TDN2 545 aa12.13□□□□□ -0.47
SREK1-204ENST00000518110 ARIH1Q9Y4X5 557 aaPredicted RBP12.13□□□□□ -0.47
SREK1-204ENST00000518110 OXER1Q8TDS5 423 aa12.12□□□□□ -0.47
SREK1-204ENST00000518110 PTCD2Q8WV60 388 aaKnown RBP12.12□□□□□ -0.47
SREK1-204ENST00000518110 ERBB3P21860 1342 aa12.11□□□□□ -0.47
SREK1-204ENST00000518110 GPR153Q6NV75 609 aa12.1□□□□□ -0.47
SREK1-204ENST00000518110 P3H3Q8IVL6 736 aa12.08□□□□□ -0.48
SREK1-204ENST00000518110 KDM4FA0A1W2PPD8 638 aa12.05□□□□□ -0.48
SREK1-204ENST00000518110 PCDHGA4Q9Y5G9 962 aa12.05□□□□□ -0.48
SREK1-204ENST00000518110 VARS2Q5ST30 1063 aaKnown RBP12.04□□□□□ -0.48
SREK1-204ENST00000518110 ARHGEF1Q92888 912 aaKnown RBP12.04□□□□□ -0.48
SREK1-204ENST00000518110 ARSIQ5FYB1 569 aa12.02□□□□□ -0.49
SREK1-204ENST00000518110 UPF1Q92900 1129 aaKnown RBP eCLIP12.02□□□□□ -0.49
SREK1-204ENST00000518110 DPYSL4O14531 572 aa12.01□□□□□ -0.49
SREK1-204ENST00000518110 PDIA6Q15084 440 aa12□□□□□ -0.49
SREK1-204ENST00000518110 ZNF687Q8N1G0 1237 aa11.98□□□□□ -0.49
SREK1-204ENST00000518110 KHSRPQ92945 711 aaKnown RBP eCLIP11.97□□□□□ -0.492e-9■□□□□ 9.8
SREK1-204ENST00000518110 TBC1D12O60347 775 aa11.96□□□□□ -0.49
SREK1-204ENST00000518110 MAP3K9P80192 1104 aa11.95□□□□□ -0.5
SREK1-204ENST00000518110 ZNF316A6NFI3 1004 aaPredicted RBP11.94□□□□□ -0.5
SREK1-204ENST00000518110 ANO8Q9HCE9 1232 aaPredicted RBP11.94□□□□□ -0.5
SREK1-204ENST00000518110 EVI5O60447 810 aa11.93□□□□□ -0.5
SREK1-204ENST00000518110 NUDT7P0C024 238 aa11.93□□□□□ -0.5
SREK1-204ENST00000518110 SPDYE16A6NNV3 312 aaPredicted RBP11.92□□□□□ -0.5
SREK1-204ENST00000518110 PTGER2P43116 358 aa11.89□□□□□ -0.51
SREK1-204ENST00000518110 LHX6Q9UPM6 363 aa11.85□□□□□ -0.51
SREK1-204ENST00000518110 SEMA3EO15041 775 aa11.84□□□□□ -0.51
SREK1-204ENST00000518110 TESPA1A2RU30 521 aaPredicted RBP11.83□□□□□ -0.52
SREK1-204ENST00000518110 JPH4Q96JJ6 628 aa11.83□□□□□ -0.52
SREK1-204ENST00000518110 MLLT3P42568 568 aaPredicted RBP11.81□□□□□ -0.52
SREK1-204ENST00000518110 FOSBP53539 338 aa11.81□□□□□ -0.52
SREK1-204ENST00000518110 PHF14O94880 888 aa11.79□□□□□ -0.52
SREK1-204ENST00000518110 RNF166Q96A37 237 aaPredicted RBP11.79□□□□□ -0.52
SREK1-204ENST00000518110 MYT1LQ9UL68 1186 aa11.79□□□□□ -0.52
SREK1-204ENST00000518110 PCDHGA10Q9Y5H3 936 aa11.79□□□□□ -0.52
SREK1-204ENST00000518110 PSDA5PKW4 1024 aaPredicted RBP11.78□□□□□ -0.52
SREK1-204ENST00000518110 PBX2P40425 430 aa11.77□□□□□ -0.53
SREK1-204ENST00000518110 LSM11P83369 360 aaKnown RBP eCLIP11.77□□□□□ -0.53
SREK1-204ENST00000518110 NBR1Q14596 966 aa11.77□□□□□ -0.53
SREK1-204ENST00000518110 DDX12PQ92771 950 aa11.77□□□□□ -0.53
SREK1-204ENST00000518110 ANKRD13DQ6ZTN6 518 aa11.76□□□□□ -0.53
SREK1-204ENST00000518110 PRIM1P49642 420 aaKnown RBP11.75□□□□□ -0.53
SREK1-204ENST00000518110 POTEEQ6S8J3 1075 aa11.75□□□□□ -0.53
SREK1-204ENST00000518110 OSBPP22059 807 aa11.74□□□□□ -0.53
SREK1-204ENST00000518110 ZNF454Q8N9F8 522 aa11.74□□□□□ -0.53
SREK1-204ENST00000518110 BCANQ96GW7 911 aa11.74□□□□□ -0.53
SREK1-204ENST00000518110 EPAS1Q99814 870 aa11.74□□□□□ -0.53
SREK1-204ENST00000518110 GRXCR2A6NFK2 248 aa11.72□□□□□ -0.53
SREK1-204ENST00000518110 PPP4R3BQ5MIZ7 849 aa11.72□□□□□ -0.53
SREK1-204ENST00000518110 TYW1BQ6NUM6 668 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 202.1 ms