RNA–Protein interactions for RNA: ENST00000517997.5

CDK16-210, Transcript of cyclin dependent kinase 16, humanhuman

TSL 4

Gene CDK16, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-210ENST00000517997 EFCAB2Q5VUJ9 269 aa20.92■□□□□ 0.94
CDK16-210ENST00000517997 DENND4BO75064 1496 aaPredicted RBP20.91■□□□□ 0.94
CDK16-210ENST00000517997 ADGRL1O94910 1474 aa20.91■□□□□ 0.94
CDK16-210ENST00000517997 RAPGEF3O95398 923 aa20.89■□□□□ 0.93
CDK16-210ENST00000517997 SUPT6HQ7KZ85 1726 aaKnown RBP20.89■□□□□ 0.93
CDK16-210ENST00000517997 MAP3K1Q13233 1512 aa20.88■□□□□ 0.93
CDK16-210ENST00000517997 ITSN2Q9NZM3 1697 aa20.86■□□□□ 0.93
CDK16-210ENST00000517997 SCAPERQ9BY12 1400 aa20.86■□□□□ 0.93
CDK16-210ENST00000517997 ZMYM4Q5VZL5 1548 aa20.85■□□□□ 0.93
CDK16-210ENST00000517997 GPATCH8Q9UKJ3 1502 aaKnown RBP20.85■□□□□ 0.93
CDK16-210ENST00000517997 POGZQ7Z3K3 1410 aa20.84■□□□□ 0.93
CDK16-210ENST00000517997 CCNB3Q8WWL7 1395 aa20.84■□□□□ 0.93
CDK16-210ENST00000517997 LRRC9Q6ZRR7 1453 aa20.83■□□□□ 0.93
CDK16-210ENST00000517997 ABCC1P33527 1531 aa20.82■□□□□ 0.92
CDK16-210ENST00000517997 ARHGEF40Q8TER5 1519 aa20.81■□□□□ 0.92
CDK16-210ENST00000517997 NCOA2Q15596 1464 aa20.8■□□□□ 0.92
CDK16-210ENST00000517997 SAMD9LQ8IVG5 1584 aa20.8■□□□□ 0.92
CDK16-210ENST00000517997 ZNF518AQ6AHZ1 1483 aa20.79■□□□□ 0.92
CDK16-210ENST00000517997 MAGI2Q86UL8 1455 aa20.78■□□□□ 0.92
CDK16-210ENST00000517997 APLP2Q06481 763 aa20.78■□□□□ 0.92
CDK16-210ENST00000517997 CFDP1Q9UEE9 299 aaPredicted RBP20.77■□□□□ 0.92
CDK16-210ENST00000517997 ZFYVE16Q7Z3T8 1539 aa20.77■□□□□ 0.92
CDK16-210ENST00000517997 KDM5CP41229 1560 aa20.76■□□□□ 0.91
CDK16-210ENST00000517997 ARHGEF12Q9NZN5 1544 aa20.75■□□□□ 0.91
CDK16-210ENST00000517997 ZNF777Q9ULD5 760 aaPredicted RBP20.75■□□□□ 0.91
CDK16-210ENST00000517997 PLEKHH2Q8IVE3 1493 aa20.75■□□□□ 0.91
CDK16-210ENST00000517997 SYCP2Q9BX26 1530 aa20.73■□□□□ 0.91
CDK16-210ENST00000517997 HECW2Q9P2P5 1572 aa20.73■□□□□ 0.91
CDK16-210ENST00000517997 KANK4Q5T7N3 995 aaPredicted RBP20.73■□□□□ 0.91
CDK16-210ENST00000517997 TRAPPC8Q9Y2L5 1435 aa20.71■□□□□ 0.91
CDK16-210ENST00000517997 AFAP1Q8N556 730 aa20.71■□□□□ 0.91
CDK16-210ENST00000517997 YEATS2Q9ULM3 1422 aa20.7■□□□□ 0.9
CDK16-210ENST00000517997 KIAA1107Q9UPP5 1409 aa20.7■□□□□ 0.9
CDK16-210ENST00000517997 KDM4FA0A1W2PPD8 638 aa20.7■□□□□ 0.9
CDK16-210ENST00000517997 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
CDK16-210ENST00000517997 MLH3Q9UHC1 1453 aa20.68■□□□□ 0.9
CDK16-210ENST00000517997 KIDINS220Q9ULH0 1771 aa20.67■□□□□ 0.9
CDK16-210ENST00000517997 BCORL1Q5H9F3 1711 aa20.65■□□□□ 0.9
CDK16-210ENST00000517997 SIGLEC1Q9BZZ2 1709 aa20.65■□□□□ 0.9
CDK16-210ENST00000517997 ABCA6Q8N139 1617 aa20.65■□□□□ 0.9
CDK16-210ENST00000517997 HNRNPMP52272 730 aaKnown RBP eCLIP20.65■□□□□ 0.99e-7■■■□□ 18.6
CDK16-210ENST00000517997 DIP2CQ9Y2E4 1556 aa20.64■□□□□ 0.9
CDK16-210ENST00000517997 ATP10AO60312 1499 aa20.64■□□□□ 0.89
CDK16-210ENST00000517997 CAMSAP2Q08AD1 1489 aa20.64■□□□□ 0.89
CDK16-210ENST00000517997 ZNF644Q9H582 1327 aaPredicted RBP20.64■□□□□ 0.89
CDK16-210ENST00000517997 MYT1LQ9UL68 1186 aa20.63■□□□□ 0.89
CDK16-210ENST00000517997 MYOM3Q5VTT5 1437 aa20.62■□□□□ 0.89
CDK16-210ENST00000517997 C9orf84Q5VXU9 1444 aa20.62■□□□□ 0.89
CDK16-210ENST00000517997 ARID4BQ4LE39 1312 aaPredicted RBP20.62■□□□□ 0.89
CDK16-210ENST00000517997 ADAMTSL3P82987 1691 aa20.62■□□□□ 0.89
CDK16-210ENST00000517997 INO80Q9ULG1 1556 aaPredicted RBP20.61■□□□□ 0.89
CDK16-210ENST00000517997 MBD5Q9P267 1494 aa20.61■□□□□ 0.89
CDK16-210ENST00000517997 REREQ9P2R6 1566 aa20.6■□□□□ 0.89
CDK16-210ENST00000517997 MIA2Q96PC5 1412 aa20.6■□□□□ 0.89
CDK16-210ENST00000517997 SPAG9O60271 1321 aaKnown RBP20.59■□□□□ 0.89
CDK16-210ENST00000517997 ATP7AQ04656 1500 aa20.59■□□□□ 0.89
CDK16-210ENST00000517997 ARHGEF5Q12774 1597 aa20.58■□□□□ 0.88
CDK16-210ENST00000517997 CCDC141Q6ZP82 1450 aa20.56■□□□□ 0.88
CDK16-210ENST00000517997 MADDQ8WXG6 1647 aa20.56■□□□□ 0.88
CDK16-210ENST00000517997 ADGBQ8N7X0 1667 aa20.54■□□□□ 0.88
CDK16-210ENST00000517997 PTPN23Q9H3S7 1636 aa20.54■□□□□ 0.88
CDK16-210ENST00000517997 FER1L4A9Z1Z3 1794 aa20.54■□□□□ 0.88
CDK16-210ENST00000517997 RSPH4AQ5TD94 716 aa20.53■□□□□ 0.88
CDK16-210ENST00000517997 AGLP35573 1532 aa20.52■□□□□ 0.87
CDK16-210ENST00000517997 RIMS1Q86UR5 1692 aaKnown RBP20.51■□□□□ 0.87
CDK16-210ENST00000517997 RTEL1-TNFRSF6BF6WH68 1400 aa20.51■□□□□ 0.87
CDK16-210ENST00000517997 FGD6Q6ZV73 1430 aa20.51■□□□□ 0.87
CDK16-210ENST00000517997 PLXNC1O60486 1568 aa20.48■□□□□ 0.87
CDK16-210ENST00000517997 CROCC2H7BZ55 1655 aa20.48■□□□□ 0.87
CDK16-210ENST00000517997 MLECQ14165 292 aa20.47■□□□□ 0.87
CDK16-210ENST00000517997 A2MP01023 1474 aa20.47■□□□□ 0.87
CDK16-210ENST00000517997 TCOF1Q13428 1488 aaKnown RBP20.47■□□□□ 0.87
CDK16-210ENST00000517997 MAST1Q9Y2H9 1570 aa20.46■□□□□ 0.87
CDK16-210ENST00000517997 PTPRMP28827 1452 aa20.46■□□□□ 0.87
CDK16-210ENST00000517997 TSPY4P0CV99 314 aa20.45■□□□□ 0.86
CDK16-210ENST00000517997 TSPY10P0CW01 314 aa20.45■□□□□ 0.86
CDK16-210ENST00000517997 DNMT1P26358 1616 aaKnown RBP20.44■□□□□ 0.86
CDK16-210ENST00000517997 SHANK2Q9UPX8 1470 aa20.4■□□□□ 0.86
CDK16-210ENST00000517997 ABCC5O15440 1437 aa20.38■□□□□ 0.85
CDK16-210ENST00000517997 DAPK1P53355 1430 aa20.37■□□□□ 0.85
CDK16-210ENST00000517997 DHX29Q7Z478 1369 aaKnown RBP20.37■□□□□ 0.85
CDK16-210ENST00000517997 PPARGC1BQ86YN6 1023 aaKnown RBP20.37■□□□□ 0.85
CDK16-210ENST00000517997 FAM50AQ14320 339 aaKnown RBP20.34■□□□□ 0.85
CDK16-210ENST00000517997 MROH2AA6NES4 1674 aa20.34■□□□□ 0.85
CDK16-210ENST00000517997 C3P01024 1663 aa20.33■□□□□ 0.85
CDK16-210ENST00000517997 ESF1Q9H501 851 aaKnown RBP20.33■□□□□ 0.85
CDK16-210ENST00000517997 EIF2AK4Q9P2K8 1649 aaKnown RBP20.32■□□□□ 0.84
CDK16-210ENST00000517997 CNTLNQ9NXG0 1405 aa20.32■□□□□ 0.84
CDK16-210ENST00000517997 CLTCQ00610 1675 aaKnown RBP20.32■□□□□ 0.84
CDK16-210ENST00000517997 SETD1BQ9UPS6 1966 aaKnown RBP20.31■□□□□ 0.84
CDK16-210ENST00000517997 DUOX2Q9NRD8 1548 aa20.31■□□□□ 0.84
CDK16-210ENST00000517997 GGT6Q6P531 493 aa20.29■□□□□ 0.84
CDK16-210ENST00000517997 RNF17Q9BXT8 1623 aaKnown RBP20.28■□□□□ 0.84
CDK16-210ENST00000517997 KIF3BO15066 747 aa20.28■□□□□ 0.84
CDK16-210ENST00000517997 PLPPR3Q6T4P5 718 aa20.28■□□□□ 0.84
CDK16-210ENST00000517997 KIF15Q9NS87 1388 aa20.28■□□□□ 0.84
CDK16-210ENST00000517997 PPP6R1Q9UPN7 881 aa20.27■□□□□ 0.84
CDK16-210ENST00000517997 FAM135AQ9P2D6 1515 aa20.27■□□□□ 0.83
CDK16-210ENST00000517997 ANKRD30AQ9BXX3 1397 aa20.26■□□□□ 0.83
CDK16-210ENST00000517997 ADGRL2O95490 1459 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms