RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 FANCAO15360 1455 aa18.52■□□□□ 0.56
AP3B1-203ENST00000517940 APLP2Q06481 763 aa18.52■□□□□ 0.56
AP3B1-203ENST00000517940 ARHGAP5Q13017 1502 aa18.51■□□□□ 0.55
AP3B1-203ENST00000517940 CCNB3Q8WWL7 1395 aa18.51■□□□□ 0.55
AP3B1-203ENST00000517940 TEX14Q8IWB6 1497 aa18.51■□□□□ 0.55
AP3B1-203ENST00000517940 NEO1Q92859 1461 aa18.51■□□□□ 0.55
AP3B1-203ENST00000517940 FRMPD1Q5SYB0 1578 aa18.5■□□□□ 0.55
AP3B1-203ENST00000517940 CFAP74Q9C0B2 1584 aa18.5■□□□□ 0.55
AP3B1-203ENST00000517940 MYOM3Q5VTT5 1437 aa18.49■□□□□ 0.55
AP3B1-203ENST00000517940 ABCC1P33527 1531 aa18.49■□□□□ 0.55
AP3B1-203ENST00000517940 ARHGEF12Q9NZN5 1544 aa18.49■□□□□ 0.55
AP3B1-203ENST00000517940 AKNAQ7Z591 1439 aa18.47■□□□□ 0.55
AP3B1-203ENST00000517940 RICTORQ6R327 1708 aa18.46■□□□□ 0.55
AP3B1-203ENST00000517940 ZNF644Q9H582 1327 aaPredicted RBP18.45■□□□□ 0.54
AP3B1-203ENST00000517940 FGD6Q6ZV73 1430 aa18.44■□□□□ 0.54
AP3B1-203ENST00000517940 CAMSAP2Q08AD1 1489 aa18.44■□□□□ 0.54
AP3B1-203ENST00000517940 SYCP2Q9BX26 1530 aa18.44■□□□□ 0.54
AP3B1-203ENST00000517940 KDM6BO15054 1643 aa18.43■□□□□ 0.54
AP3B1-203ENST00000517940 ADGRL1O94910 1474 aa18.43■□□□□ 0.54
AP3B1-203ENST00000517940 PTPN23Q9H3S7 1636 aa18.42■□□□□ 0.54
AP3B1-203ENST00000517940 MIA2Q96PC5 1412 aa18.42■□□□□ 0.54
AP3B1-203ENST00000517940 TCOF1Q13428 1488 aaKnown RBP18.42■□□□□ 0.54
AP3B1-203ENST00000517940 MBD5Q9P267 1494 aa18.41■□□□□ 0.54
AP3B1-203ENST00000517940 EFCAB2Q5VUJ9 269 aa18.41■□□□□ 0.54
AP3B1-203ENST00000517940 CFDP1Q9UEE9 299 aaPredicted RBP18.4■□□□□ 0.54
AP3B1-203ENST00000517940 POGZQ7Z3K3 1410 aa18.4■□□□□ 0.54
AP3B1-203ENST00000517940 TRAPPC8Q9Y2L5 1435 aa18.4■□□□□ 0.54
AP3B1-203ENST00000517940 SCAPERQ9BY12 1400 aa18.39■□□□□ 0.53
AP3B1-203ENST00000517940 KDM5CP41229 1560 aa18.38■□□□□ 0.53
AP3B1-203ENST00000517940 KIAA1107Q9UPP5 1409 aa18.38■□□□□ 0.53
AP3B1-203ENST00000517940 DENND4BO75064 1496 aaPredicted RBP18.36■□□□□ 0.53
AP3B1-203ENST00000517940 ZMYM4Q5VZL5 1548 aa18.36■□□□□ 0.53
AP3B1-203ENST00000517940 ARHGEF5Q12774 1597 aa18.35■□□□□ 0.53
AP3B1-203ENST00000517940 RRBP1Q9P2E9 1410 aaKnown RBP18.35■□□□□ 0.53
AP3B1-203ENST00000517940 RAPGEF3O95398 923 aa18.35■□□□□ 0.53
AP3B1-203ENST00000517940 ZNF777Q9ULD5 760 aaPredicted RBP18.35■□□□□ 0.53
AP3B1-203ENST00000517940 PLEKHH2Q8IVE3 1493 aa18.34■□□□□ 0.53
AP3B1-203ENST00000517940 CROCC2H7BZ55 1655 aa18.32■□□□□ 0.52
AP3B1-203ENST00000517940 DNMT1P26358 1616 aaKnown RBP18.32■□□□□ 0.52
AP3B1-203ENST00000517940 HNRNPMP52272 730 aaKnown RBP eCLIP18.32■□□□□ 0.52
AP3B1-203ENST00000517940 ZNF518AQ6AHZ1 1483 aa18.32■□□□□ 0.52
AP3B1-203ENST00000517940 INO80Q9ULG1 1556 aaPredicted RBP18.31■□□□□ 0.52
AP3B1-203ENST00000517940 KIDINS220Q9ULH0 1771 aa18.31■□□□□ 0.52
AP3B1-203ENST00000517940 AFAP1Q8N556 730 aa18.3■□□□□ 0.52
AP3B1-203ENST00000517940 ZFYVE16Q7Z3T8 1539 aa18.29■□□□□ 0.52
AP3B1-203ENST00000517940 CCDC141Q6ZP82 1450 aa18.29■□□□□ 0.52
AP3B1-203ENST00000517940 ABCC5O15440 1437 aa18.29■□□□□ 0.52
AP3B1-203ENST00000517940 HECW2Q9P2P5 1572 aa18.29■□□□□ 0.52
AP3B1-203ENST00000517940 SIGLEC1Q9BZZ2 1709 aa18.29■□□□□ 0.52
AP3B1-203ENST00000517940 PTPRKQ15262 1439 aa18.28■□□□□ 0.52
AP3B1-203ENST00000517940 ABCA6Q8N139 1617 aa18.27■□□□□ 0.52
AP3B1-203ENST00000517940 YEATS2Q9ULM3 1422 aa18.27■□□□□ 0.52
AP3B1-203ENST00000517940 ARHGEF40Q8TER5 1519 aa18.27■□□□□ 0.51
AP3B1-203ENST00000517940 MAST1Q9Y2H9 1570 aa18.26■□□□□ 0.51
AP3B1-203ENST00000517940 DAPK1P53355 1430 aa18.26■□□□□ 0.51
AP3B1-203ENST00000517940 MLH3Q9UHC1 1453 aa18.26■□□□□ 0.51
AP3B1-203ENST00000517940 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.25■□□□□ 0.51
AP3B1-203ENST00000517940 DIP2CQ9Y2E4 1556 aa18.25■□□□□ 0.51
AP3B1-203ENST00000517940 ATP7AQ04656 1500 aa18.24■□□□□ 0.51
AP3B1-203ENST00000517940 SHANK2Q9UPX8 1470 aa18.23■□□□□ 0.51
AP3B1-203ENST00000517940 ADGBQ8N7X0 1667 aa18.22■□□□□ 0.51
AP3B1-203ENST00000517940 MAGI2Q86UL8 1455 aa18.21■□□□□ 0.51
AP3B1-203ENST00000517940 FAM50AQ14320 339 aaKnown RBP18.2■□□□□ 0.5
AP3B1-203ENST00000517940 C9orf84Q5VXU9 1444 aa18.2■□□□□ 0.5
AP3B1-203ENST00000517940 RTEL1-TNFRSF6BF6WH68 1400 aa18.19■□□□□ 0.5
AP3B1-203ENST00000517940 PLXNC1O60486 1568 aa18.19■□□□□ 0.5
AP3B1-203ENST00000517940 ADGRL2O95490 1459 aa18.18■□□□□ 0.5
AP3B1-203ENST00000517940 SPAG9O60271 1321 aaKnown RBP18.17■□□□□ 0.5
AP3B1-203ENST00000517940 REREQ9P2R6 1566 aa18.16■□□□□ 0.5
AP3B1-203ENST00000517940 RSPH4AQ5TD94 716 aa18.14■□□□□ 0.49
AP3B1-203ENST00000517940 ATP10AO60312 1499 aa18.13■□□□□ 0.49
AP3B1-203ENST00000517940 NCOA1Q15788 1441 aa18.12■□□□□ 0.49
AP3B1-203ENST00000517940 CHIC2Q9UKJ5 165 aa18.1■□□□□ 0.49
AP3B1-203ENST00000517940 A2MP01023 1474 aa18.09■□□□□ 0.49
AP3B1-203ENST00000517940 BCORL1Q5H9F3 1711 aa18.08■□□□□ 0.48
AP3B1-203ENST00000517940 AGLP35573 1532 aa18.08■□□□□ 0.48
AP3B1-203ENST00000517940 ROCK1Q13464 1354 aa18.07■□□□□ 0.48
AP3B1-203ENST00000517940 KIF15Q9NS87 1388 aa18.07■□□□□ 0.48
AP3B1-203ENST00000517940 TSPY4P0CV99 314 aa18.07■□□□□ 0.48
AP3B1-203ENST00000517940 TSPY10P0CW01 314 aa18.07■□□□□ 0.48
AP3B1-203ENST00000517940 ITGAEP38570 1179 aa18.06■□□□□ 0.48
AP3B1-203ENST00000517940 DUOX2Q9NRD8 1548 aa18.06■□□□□ 0.48
AP3B1-203ENST00000517940 GCC2Q8IWJ2 1684 aa18.06■□□□□ 0.48
AP3B1-203ENST00000517940 MROH1Q8NDA8 1641 aa18.05■□□□□ 0.48
AP3B1-203ENST00000517940 DHX29Q7Z478 1369 aaKnown RBP18.04■□□□□ 0.48
AP3B1-203ENST00000517940 ANKRD30AQ9BXX3 1397 aa18.04■□□□□ 0.48
AP3B1-203ENST00000517940 EIF2AK4Q9P2K8 1649 aaKnown RBP18.03■□□□□ 0.48
AP3B1-203ENST00000517940 RRP7BPQ9NSQ0 103 aa18.03■□□□□ 0.48
AP3B1-203ENST00000517940 NAIPQ13075 1403 aa18.03■□□□□ 0.48
AP3B1-203ENST00000517940 RNF17Q9BXT8 1623 aaKnown RBP18.02■□□□□ 0.48
AP3B1-203ENST00000517940 DEPDC5O75140 1603 aa18.01■□□□□ 0.47
AP3B1-203ENST00000517940 ADAMTSL3P82987 1691 aa18■□□□□ 0.47
AP3B1-203ENST00000517940 HFM1A2PYH4 1435 aa18■□□□□ 0.47
AP3B1-203ENST00000517940 ERBINQ96RT1 1412 aa18■□□□□ 0.47
AP3B1-203ENST00000517940 MYT1LQ9UL68 1186 aa18■□□□□ 0.47
AP3B1-203ENST00000517940 ANKRD50Q9ULJ7 1429 aa17.97■□□□□ 0.47
AP3B1-203ENST00000517940 UNC13BO14795 1591 aa17.96■□□□□ 0.46
AP3B1-203ENST00000517940 MADDQ8WXG6 1647 aa17.95■□□□□ 0.46
AP3B1-203ENST00000517940 PRDM15P57071 1507 aaPredicted RBP17.95■□□□□ 0.46
AP3B1-203ENST00000517940 VWDEQ8N2E2 1590 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms