RNA–Protein interactions for RNA: ENST00000517852.5

MDM2-221, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-221ENST00000517852 ZNF710Q8N1W2 664 aa7.96□□□□□ -1.14
MDM2-221ENST00000517852 TAOK2Q9UL54 1235 aa7.96□□□□□ -1.14
MDM2-221ENST00000517852 KHSRPQ92945 711 aaKnown RBP eCLIP7.94□□□□□ -1.142e-9■■■□□ 16.5
MDM2-221ENST00000517852 DOK7Q18PE1 504 aa7.92□□□□□ -1.14
MDM2-221ENST00000517852 CHGAP10645 457 aaKnown RBP7.91□□□□□ -1.14
MDM2-221ENST00000517852 HOXB1P14653 301 aaPredicted RBP7.91□□□□□ -1.14
MDM2-221ENST00000517852 C2orf72A6NCS6 295 aa7.9□□□□□ -1.14
MDM2-221ENST00000517852 KRTAP3-3Q9BYR6 98 aa7.9□□□□□ -1.14
MDM2-221ENST00000517852 KRTAP3-2Q9BYR7 98 aa7.9□□□□□ -1.14
MDM2-221ENST00000517852 ARSIQ5FYB1 569 aa7.89□□□□□ -1.15
MDM2-221ENST00000517852 SPNS2Q8IVW8 549 aa7.89□□□□□ -1.15
MDM2-221ENST00000517852 ERBB3P21860 1342 aa7.88□□□□□ -1.15
MDM2-221ENST00000517852 VARS2Q5ST30 1063 aaKnown RBP7.87□□□□□ -1.15
MDM2-221ENST00000517852 GPR153Q6NV75 609 aa7.87□□□□□ -1.15
MDM2-221ENST00000517852 KIF3CO14782 793 aa7.85□□□□□ -1.15
MDM2-221ENST00000517852 RIMBP2O15034 1052 aa7.85□□□□□ -1.15
MDM2-221ENST00000517852 MMRN1Q13201 1228 aa7.85□□□□□ -1.15
MDM2-221ENST00000517852 NKX1-1Q15270 411 aaPredicted RBP7.85□□□□□ -1.15
MDM2-221ENST00000517852 HS6ST3Q8IZP7 471 aa7.85□□□□□ -1.15
MDM2-221ENST00000517852 NUDT7P0C024 238 aa7.81□□□□□ -1.16
MDM2-221ENST00000517852 DCAF8L2P0C7V8 631 aa7.81□□□□□ -1.16
MDM2-221ENST00000517852 TMC2Q8TDI7 906 aa7.81□□□□□ -1.16
MDM2-221ENST00000517852 ZSWIM6Q9HCJ5 1215 aa7.78□□□□□ -1.16
MDM2-221ENST00000517852 ZNF316A6NFI3 1004 aaPredicted RBP7.76□□□□□ -1.17
MDM2-221ENST00000517852 PCDHGA4Q9Y5G9 962 aa7.76□□□□□ -1.17
MDM2-221ENST00000517852 LHX6Q9UPM6 363 aa7.75□□□□□ -1.17
MDM2-221ENST00000517852 DSG2Q14126 1118 aa7.74□□□□□ -1.17
MDM2-221ENST00000517852 PLPP6Q8IY26 295 aa7.74□□□□□ -1.17
MDM2-221ENST00000517852 ZNF687Q8N1G0 1237 aa7.74□□□□□ -1.17
MDM2-221ENST00000517852 AXIN2Q9Y2T1 843 aa7.73□□□□□ -1.17
MDM2-221ENST00000517852 AMER1Q5JTC6 1135 aaPredicted RBP7.72□□□□□ -1.17
MDM2-221ENST00000517852 POTEEQ6S8J3 1075 aa7.71□□□□□ -1.18
MDM2-221ENST00000517852 ANKRD13DQ6ZTN6 518 aa7.71□□□□□ -1.18
MDM2-221ENST00000517852 GTPBP6O43824 516 aaPredicted RBP7.7□□□□□ -1.18
MDM2-221ENST00000517852 RTN4Q9NQC3 1192 aaKnown RBP7.7□□□□□ -1.18
MDM2-221ENST00000517852 GPHNQ9NQX3 736 aaPredicted RBP7.7□□□□□ -1.18
MDM2-221ENST00000517852 FOXK1P85037 733 aa7.69□□□□□ -1.18
MDM2-221ENST00000517852 UPF1Q92900 1129 aaKnown RBP eCLIP7.69□□□□□ -1.18
MDM2-221ENST00000517852 SLC34A2O95436 690 aa7.68□□□□□ -1.18
MDM2-221ENST00000517852 DNAJC5Q9H3Z4 198 aa7.68□□□□□ -1.18
MDM2-221ENST00000517852 NCKAP5LQ9HCH0 1330 aa7.67□□□□□ -1.18
MDM2-221ENST00000517852 KDM4FA0A1W2PPD8 638 aa7.64□□□□□ -1.19
MDM2-221ENST00000517852 CADPS2Q86UW7 1296 aa7.64□□□□□ -1.19
MDM2-221ENST00000517852 PTCD2Q8WV60 388 aaKnown RBP7.64□□□□□ -1.19
MDM2-221ENST00000517852 RNF166Q96A37 237 aaPredicted RBP7.64□□□□□ -1.19
MDM2-221ENST00000517852 CRISPLD2Q9H0B8 497 aa7.64□□□□□ -1.19
MDM2-221ENST00000517852 PSEN2P49810 448 aa7.63□□□□□ -1.19
MDM2-221ENST00000517852 LSM11P83369 360 aaKnown RBP eCLIP7.63□□□□□ -1.19
MDM2-221ENST00000517852 PPP1R15BQ5SWA1 713 aa7.63□□□□□ -1.19
MDM2-221ENST00000517852 MYT1LQ9UL68 1186 aa7.63□□□□□ -1.19
MDM2-221ENST00000517852 DMRTA1Q5VZB9 504 aa7.61□□□□□ -1.19
MDM2-221ENST00000517852 LARP6Q9BRS8 491 aaKnown RBP7.61□□□□□ -1.19
MDM2-221ENST00000517852 OXER1Q8TDS5 423 aa7.59□□□□□ -1.19
MDM2-221ENST00000517852 PDE4AP27815 886 aa7.58□□□□□ -1.2
MDM2-221ENST00000517852 RYDENQ9NUL5 291 aaKnown RBP7.58□□□□□ -1.2
MDM2-221ENST00000517852 ARHGAP33O14559 1287 aa7.56□□□□□ -1.2
MDM2-221ENST00000517852 TBC1D12O60347 775 aa7.56□□□□□ -1.2
MDM2-221ENST00000517852 PBX2P40425 430 aa7.55□□□□□ -1.2
MDM2-221ENST00000517852 ZNF454Q8N9F8 522 aa7.55□□□□□ -1.2
MDM2-221ENST00000517852 DDX27Q96GQ7 796 aaKnown RBP7.55□□□□□ -1.2
MDM2-221ENST00000517852 KCNK17Q96T54 332 aa7.55□□□□□ -1.2
MDM2-221ENST00000517852 EMILIN3Q9NT22 766 aa7.55□□□□□ -1.2
MDM2-221ENST00000517852 PPP4R3BQ5MIZ7 849 aa7.54□□□□□ -1.2
MDM2-221ENST00000517852 ADGRD1Q6QNK2 874 aa7.54□□□□□ -1.2
MDM2-221ENST00000517852 EVI5O60447 810 aa7.52□□□□□ -1.21
MDM2-221ENST00000517852 MFSD10Q14728 455 aa7.51□□□□□ -1.21
MDM2-221ENST00000517852 PSDA5PKW4 1024 aaPredicted RBP7.5□□□□□ -1.21
MDM2-221ENST00000517852 MAP3K9P80192 1104 aa7.5□□□□□ -1.21
MDM2-221ENST00000517852 FOSBP53539 338 aa7.48□□□□□ -1.21
MDM2-221ENST00000517852 BBXQ8WY36 941 aaPredicted RBP7.48□□□□□ -1.21
MDM2-221ENST00000517852 ADAM33Q9BZ11 813 aa7.48□□□□□ -1.21
MDM2-221ENST00000517852 HRO43593 1189 aa7.47□□□□□ -1.21
MDM2-221ENST00000517852 PTGER2P43116 358 aa7.47□□□□□ -1.21
MDM2-221ENST00000517852 KCTD12Q96CX2 325 aaKnown RBP7.46□□□□□ -1.22
MDM2-221ENST00000517852 CFAP44Q96MT7 982 aa7.46□□□□□ -1.22
MDM2-221ENST00000517852 ANO8Q9HCE9 1232 aaPredicted RBP7.46□□□□□ -1.22
MDM2-221ENST00000517852 DPYSL4O14531 572 aa7.45□□□□□ -1.22
MDM2-221ENST00000517852 BCL2L12Q9HB09 334 aa7.44□□□□□ -1.22
MDM2-221ENST00000517852 VPS9D1Q9Y2B5 631 aa7.44□□□□□ -1.22
MDM2-221ENST00000517852 PCDHGA10Q9Y5H3 936 aa7.44□□□□□ -1.22
MDM2-221ENST00000517852 TK2O00142 265 aa7.43□□□□□ -1.22
MDM2-221ENST00000517852 PAXIP1Q6ZW49 1069 aaPredicted RBP7.43□□□□□ -1.22
MDM2-221ENST00000517852 ZDHHC16Q969W1 377 aa7.43□□□□□ -1.22
MDM2-221ENST00000517852 JPH4Q96JJ6 628 aa7.43□□□□□ -1.22
MDM2-221ENST00000517852 PTPREP23469 700 aa7.42□□□□□ -1.22
MDM2-221ENST00000517852 SPRYD3Q8NCJ5 442 aa7.42□□□□□ -1.22
MDM2-221ENST00000517852 COL9A1P20849 921 aa7.41□□□□□ -1.22
MDM2-221ENST00000517852 PTPN5P54829 565 aa7.41□□□□□ -1.22
MDM2-221ENST00000517852 PROX2Q3B8N5 592 aa7.41□□□□□ -1.22
MDM2-221ENST00000517852 KCNH8Q96L42 1107 aa7.41□□□□□ -1.22
MDM2-221ENST00000517852 STAC3Q96MF2 364 aa7.41□□□□□ -1.22
MDM2-221ENST00000517852 ZBED2Q9BTP6 218 aa7.41□□□□□ -1.22
MDM2-221ENST00000517852 DDX12PQ92771 950 aa7.4□□□□□ -1.22
MDM2-221ENST00000517852 RBM33Q96EV2 1170 aaKnown RBP7.4□□□□□ -1.22
MDM2-221ENST00000517852 CAMK2BQ13554 666 aa7.39□□□□□ -1.23
MDM2-221ENST00000517852 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.38□□□□□ -1.23
MDM2-221ENST00000517852 BHMG1C9JSJ3 638 aaPredicted RBP7.37□□□□□ -1.23
MDM2-221ENST00000517852 PLA2G2EQ9NZK7 142 aa7.37□□□□□ -1.23
MDM2-221ENST00000517852 HCSTQ9UBK5 93 aa7.37□□□□□ -1.23
MDM2-221ENST00000517852 TYW1BQ6NUM6 668 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms