RNA–Protein interactions for RNA: ENST00000517801.5

FAM49B-204, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-204ENST00000517801 CRISPLD2Q9H0B8 497 aa12.36□□□□□ -0.43
FAM49B-204ENST00000517801 LARP6Q9BRS8 491 aaKnown RBP12.34□□□□□ -0.43
FAM49B-204ENST00000517801 MFSD10Q14728 455 aa12.31□□□□□ -0.44
FAM49B-204ENST00000517801 GPHNQ9NQX3 736 aaPredicted RBP12.3□□□□□ -0.44
FAM49B-204ENST00000517801 TMC2Q8TDI7 906 aa12.29□□□□□ -0.44
FAM49B-204ENST00000517801 DDX27Q96GQ7 796 aaKnown RBP12.29□□□□□ -0.44
FAM49B-204ENST00000517801 P3H3Q8IVL6 736 aa12.28□□□□□ -0.44
FAM49B-204ENST00000517801 C3orf67Q6ZVT6 689 aa12.27□□□□□ -0.45
FAM49B-204ENST00000517801 E2F4Q16254 413 aa12.25□□□□□ -0.45
FAM49B-204ENST00000517801 PPP1R15BQ5SWA1 713 aa12.24□□□□□ -0.45
FAM49B-204ENST00000517801 C2orf72A6NCS6 295 aa12.23□□□□□ -0.45
FAM49B-204ENST00000517801 KIF3CO14782 793 aa12.23□□□□□ -0.45
FAM49B-204ENST00000517801 KCNV2Q8TDN2 545 aa12.23□□□□□ -0.45
FAM49B-204ENST00000517801 TMEM92Q6UXU6 159 aa12.22□□□□□ -0.45
FAM49B-204ENST00000517801 FOXK1P85037 733 aa12.21□□□□□ -0.45
FAM49B-204ENST00000517801 DSG2Q14126 1118 aa12.21□□□□□ -0.45
FAM49B-204ENST00000517801 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.2□□□□□ -0.46
FAM49B-204ENST00000517801 NBR1Q14596 966 aa12.19□□□□□ -0.46
FAM49B-204ENST00000517801 POTEB2H3BUK9 544 aa12.18□□□□□ -0.46
FAM49B-204ENST00000517801 CAMK2BQ13554 666 aa12.17□□□□□ -0.46
FAM49B-204ENST00000517801 PLPP6Q8IY26 295 aa12.16□□□□□ -0.46
FAM49B-204ENST00000517801 POTEJP0CG39 1038 aa12.15□□□□□ -0.46
FAM49B-204ENST00000517801 ARHGEF1Q92888 912 aaKnown RBP12.15□□□□□ -0.46
FAM49B-204ENST00000517801 MAMSTRQ6ZN01 415 aa12.11□□□□□ -0.47
FAM49B-204ENST00000517801 SCUBE2Q9NQ36 999 aa12.1□□□□□ -0.47
FAM49B-204ENST00000517801 ARIH1Q9Y4X5 557 aaPredicted RBP12.09□□□□□ -0.47
FAM49B-204ENST00000517801 EMILIN3Q9NT22 766 aa12.08□□□□□ -0.48
FAM49B-204ENST00000517801 SLAIN1Q8ND83 568 aa12.04□□□□□ -0.48
FAM49B-204ENST00000517801 DPYSL4O14531 572 aa12.03□□□□□ -0.48
FAM49B-204ENST00000517801 UPF1Q92900 1129 aaKnown RBP eCLIP12.01□□□□□ -0.49
FAM49B-204ENST00000517801 OXER1Q8TDS5 423 aa12□□□□□ -0.49
FAM49B-204ENST00000517801 MAP3K9P80192 1104 aa11.99□□□□□ -0.49
FAM49B-204ENST00000517801 SLC34A2O95436 690 aa11.98□□□□□ -0.49
FAM49B-204ENST00000517801 SPDYE16A6NNV3 312 aaPredicted RBP11.97□□□□□ -0.49
FAM49B-204ENST00000517801 SEMA3EO15041 775 aa11.97□□□□□ -0.49
FAM49B-204ENST00000517801 PDIA6Q15084 440 aa11.97□□□□□ -0.49
FAM49B-204ENST00000517801 LHX8Q68G74 356 aa11.97□□□□□ -0.49
FAM49B-204ENST00000517801 PTCD2Q8WV60 388 aaKnown RBP11.96□□□□□ -0.49
FAM49B-204ENST00000517801 TBC1D12O60347 775 aa11.95□□□□□ -0.5
FAM49B-204ENST00000517801 TESPA1A2RU30 521 aaPredicted RBP11.94□□□□□ -0.5
FAM49B-204ENST00000517801 OTUD5Q96G74 571 aa11.94□□□□□ -0.5
FAM49B-204ENST00000517801 TULP1O00294 542 aaPredicted RBP11.92□□□□□ -0.5
FAM49B-204ENST00000517801 DOK7Q18PE1 504 aa11.92□□□□□ -0.5
FAM49B-204ENST00000517801 TPRNQ4KMQ1 711 aa11.91□□□□□ -0.5
FAM49B-204ENST00000517801 PCDHGA4Q9Y5G9 962 aa11.9□□□□□ -0.5
FAM49B-204ENST00000517801 HOXB3P14651 431 aaPredicted RBP11.89□□□□□ -0.51
FAM49B-204ENST00000517801 SMYD5Q6GMV2 418 aa11.89□□□□□ -0.51
FAM49B-204ENST00000517801 ZNF316A6NFI3 1004 aaPredicted RBP11.88□□□□□ -0.51
FAM49B-204ENST00000517801 RIMBP2O15034 1052 aa11.88□□□□□ -0.51
FAM49B-204ENST00000517801 EVI5O60447 810 aa11.88□□□□□ -0.51
FAM49B-204ENST00000517801 SNPHO15079 494 aa11.87□□□□□ -0.51
FAM49B-204ENST00000517801 PRKCSHP14314 528 aaPredicted RBP11.87□□□□□ -0.51
FAM49B-204ENST00000517801 MLLT3P42568 568 aaPredicted RBP11.87□□□□□ -0.51
FAM49B-204ENST00000517801 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.86□□□□□ -0.51
FAM49B-204ENST00000517801 ZNF710Q8N1W2 664 aa11.85□□□□□ -0.51
FAM49B-204ENST00000517801 ZSWIM6Q9HCJ5 1215 aa11.85□□□□□ -0.51
FAM49B-204ENST00000517801 LMOD2Q6P5Q4 547 aa11.84□□□□□ -0.51
FAM49B-204ENST00000517801 PTGER2P43116 358 aa11.82□□□□□ -0.52
FAM49B-204ENST00000517801 ANO8Q9HCE9 1232 aaPredicted RBP11.82□□□□□ -0.52
FAM49B-204ENST00000517801 GRXCR2A6NFK2 248 aa11.8□□□□□ -0.52
FAM49B-204ENST00000517801 ARSIQ5FYB1 569 aa11.8□□□□□ -0.52
FAM49B-204ENST00000517801 GPR153Q6NV75 609 aa11.8□□□□□ -0.52
FAM49B-204ENST00000517801 DDX12PQ92771 950 aa11.79□□□□□ -0.52
FAM49B-204ENST00000517801 KDM4FA0A1W2PPD8 638 aa11.78□□□□□ -0.52
FAM49B-204ENST00000517801 NUDT7P0C024 238 aa11.78□□□□□ -0.52
FAM49B-204ENST00000517801 KHSRPQ92945 711 aaKnown RBP eCLIP11.78□□□□□ -0.52
FAM49B-204ENST00000517801 RBM26Q5T8P6 1007 aaKnown RBP11.74□□□□□ -0.53
FAM49B-204ENST00000517801 PHF14O94880 888 aa11.73□□□□□ -0.53
FAM49B-204ENST00000517801 HOXB1P14653 301 aaPredicted RBP11.73□□□□□ -0.53
FAM49B-204ENST00000517801 OSBPP22059 807 aa11.73□□□□□ -0.53
FAM49B-204ENST00000517801 JPH4Q96JJ6 628 aa11.71□□□□□ -0.53
FAM49B-204ENST00000517801 EPAS1Q99814 870 aa11.71□□□□□ -0.53
FAM49B-204ENST00000517801 GPIHBP1Q8IV16 184 aa11.69□□□□□ -0.54
FAM49B-204ENST00000517801 PCDHGA10Q9Y5H3 936 aa11.69□□□□□ -0.54
FAM49B-204ENST00000517801 FOSBP53539 338 aa11.68□□□□□ -0.54
FAM49B-204ENST00000517801 TYW1BQ6NUM6 668 aa11.68□□□□□ -0.54
FAM49B-204ENST00000517801 ZNF454Q8N9F8 522 aa11.67□□□□□ -0.54
FAM49B-204ENST00000517801 ZC3H15Q8WU90 426 aaKnown RBP11.67□□□□□ -0.54
FAM49B-204ENST00000517801 LHX6Q9UPM6 363 aa11.67□□□□□ -0.54
FAM49B-204ENST00000517801 PRIM1P49642 420 aaKnown RBP11.66□□□□□ -0.54
FAM49B-204ENST00000517801 FBXW7Q969H0 707 aa11.66□□□□□ -0.54
FAM49B-204ENST00000517801 EN1Q05925 392 aaPredicted RBP11.65□□□□□ -0.54
FAM49B-204ENST00000517801 NUTM2FA1L443 756 aa11.64□□□□□ -0.55
FAM49B-204ENST00000517801 PSDA5PKW4 1024 aaPredicted RBP11.64□□□□□ -0.55
FAM49B-204ENST00000517801 MAP3K7O43318 606 aa11.63□□□□□ -0.55
FAM49B-204ENST00000517801 ST18O60284 1047 aa11.63□□□□□ -0.55
FAM49B-204ENST00000517801 ZDHHC16Q969W1 377 aa11.63□□□□□ -0.55
FAM49B-204ENST00000517801 RBM33Q96EV2 1170 aaKnown RBP11.63□□□□□ -0.55
FAM49B-204ENST00000517801 PPP4R3BQ5MIZ7 849 aa11.61□□□□□ -0.55
FAM49B-204ENST00000517801 FAM163AQ96GL9 167 aaPredicted RBP11.6□□□□□ -0.55
FAM49B-204ENST00000517801 ZMYND10O75800 440 aa11.59□□□□□ -0.55
FAM49B-204ENST00000517801 GPR37O15354 613 aa11.58□□□□□ -0.56
FAM49B-204ENST00000517801 FCHSD2O94868 740 aa11.58□□□□□ -0.56
FAM49B-204ENST00000517801 ADAM33Q9BZ11 813 aa11.58□□□□□ -0.56
FAM49B-204ENST00000517801 TSR1Q2NL82 804 aaKnown RBP11.57□□□□□ -0.56
FAM49B-204ENST00000517801 CDHR5Q9HBB8 845 aa11.57□□□□□ -0.56
FAM49B-204ENST00000517801 EMP3P54852 163 aa11.56□□□□□ -0.56
FAM49B-204ENST00000517801 ERBB3P21860 1342 aa11.56□□□□□ -0.56
FAM49B-204ENST00000517801 PTGDRQ13258 359 aa11.55□□□□□ -0.56
FAM49B-204ENST00000517801 C6orf132Q5T0Z8 1188 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms