RNA–Protein interactions for RNA: ENST00000517738.1

EXTL3-203, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 529 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-203ENST00000517738 TROQ12816 1431 aaPredicted RBP21.32■■□□□ 1
EXTL3-203ENST00000517738 RIMS1Q86UR5 1692 aaKnown RBP21.32■■□□□ 1
EXTL3-203ENST00000517738 SCAPERQ9BY12 1400 aa21.31■■□□□ 1
EXTL3-203ENST00000517738 PCF11O94913 1555 aaKnown RBP21.29■■□□□ 1
EXTL3-203ENST00000517738 LMTK3Q96Q04 1460 aa21.29■■□□□ 1
EXTL3-203ENST00000517738 ARID4BQ4LE39 1312 aaPredicted RBP21.27■□□□□ 0.99
EXTL3-203ENST00000517738 KDM5CP41229 1560 aa21.26■□□□□ 0.99
EXTL3-203ENST00000517738 CASKIN1Q8WXD9 1431 aa21.25■□□□□ 0.99
EXTL3-203ENST00000517738 CDC42BPBQ9Y5S2 1711 aa21.25■□□□□ 0.99
EXTL3-203ENST00000517738 ATP1B4Q9UN42 357 aaPredicted RBP21.23■□□□□ 0.99
EXTL3-203ENST00000517738 EFCAB2Q5VUJ9 269 aa21.22■□□□□ 0.99
EXTL3-203ENST00000517738 CDK11AQ9UQ88 783 aaPredicted RBP21.22■□□□□ 0.99
EXTL3-203ENST00000517738 ARHGEF12Q9NZN5 1544 aa21.22■□□□□ 0.99
EXTL3-203ENST00000517738 ATP10AO60312 1499 aa21.21■□□□□ 0.99
EXTL3-203ENST00000517738 PREX2Q70Z35 1606 aa21.21■□□□□ 0.99
EXTL3-203ENST00000517738 ARHGAP5Q13017 1502 aa21.2■□□□□ 0.98
EXTL3-203ENST00000517738 FER1L4A9Z1Z3 1794 aa21.2■□□□□ 0.98
EXTL3-203ENST00000517738 CLIP1P30622 1438 aa21.2■□□□□ 0.98
EXTL3-203ENST00000517738 C9orf84Q5VXU9 1444 aa21.2■□□□□ 0.98
EXTL3-203ENST00000517738 CCDC18Q5T9S5 1454 aa21.2■□□□□ 0.98
EXTL3-203ENST00000517738 ZNF518AQ6AHZ1 1483 aa21.2■□□□□ 0.98
EXTL3-203ENST00000517738 ABCC1P33527 1531 aa21.17■□□□□ 0.98
EXTL3-203ENST00000517738 DIP2CQ9Y2E4 1556 aa21.17■□□□□ 0.98
EXTL3-203ENST00000517738 REREQ9P2R6 1566 aa21.16■□□□□ 0.98
EXTL3-203ENST00000517738 FYCO1Q9BQS8 1478 aa21.16■□□□□ 0.98
EXTL3-203ENST00000517738 CDC42BPAQ5VT25 1732 aa21.15■□□□□ 0.98
EXTL3-203ENST00000517738 ABCA6Q8N139 1617 aa21.15■□□□□ 0.98
EXTL3-203ENST00000517738 ITSN2Q9NZM3 1697 aa21.14■□□□□ 0.97
EXTL3-203ENST00000517738 AFAP1Q8N556 730 aa21.13■□□□□ 0.97
EXTL3-203ENST00000517738 MLH3Q9UHC1 1453 aa21.13■□□□□ 0.97
EXTL3-203ENST00000517738 TRAPPC8Q9Y2L5 1435 aa21.12■□□□□ 0.97
EXTL3-203ENST00000517738 MLECQ14165 292 aa21.09■□□□□ 0.97
EXTL3-203ENST00000517738 KIDINS220Q9ULH0 1771 aa21.08■□□□□ 0.97
EXTL3-203ENST00000517738 AGLP35573 1532 aa21.07■□□□□ 0.96
EXTL3-203ENST00000517738 SAMD9LQ8IVG5 1584 aa21.06■□□□□ 0.96
EXTL3-203ENST00000517738 HSPA2P54652 639 aa21.06■□□□□ 0.96
EXTL3-203ENST00000517738 GPATCH8Q9UKJ3 1502 aaKnown RBP21.04■□□□□ 0.96
EXTL3-203ENST00000517738 PREX1Q8TCU6 1659 aa21.04■□□□□ 0.96
EXTL3-203ENST00000517738 FBXO41Q8TF61 875 aa21■□□□□ 0.95
EXTL3-203ENST00000517738 SYCP2Q9BX26 1530 aa20.99■□□□□ 0.95
EXTL3-203ENST00000517738 CEBPAP49715 358 aaPredicted RBP20.99■□□□□ 0.95
EXTL3-203ENST00000517738 PLPPR3Q6T4P5 718 aa20.99■□□□□ 0.95
EXTL3-203ENST00000517738 C3P01024 1663 aa20.99■□□□□ 0.95
EXTL3-203ENST00000517738 INO80Q9ULG1 1556 aaPredicted RBP20.95■□□□□ 0.94
EXTL3-203ENST00000517738 STRCQ7RTU9 1775 aa20.95■□□□□ 0.94
EXTL3-203ENST00000517738 KIAA1107Q9UPP5 1409 aa20.94■□□□□ 0.94
EXTL3-203ENST00000517738 PLXNC1O60486 1568 aa20.93■□□□□ 0.94
EXTL3-203ENST00000517738 TIAM1Q13009 1591 aa20.92■□□□□ 0.94
EXTL3-203ENST00000517738 ATP7AQ04656 1500 aa20.91■□□□□ 0.94
EXTL3-203ENST00000517738 SETD1BQ9UPS6 1966 aaKnown RBP20.91■□□□□ 0.94
EXTL3-203ENST00000517738 EHBP1L1Q8N3D4 1523 aa20.88■□□□□ 0.93
EXTL3-203ENST00000517738 PLEKHH2Q8IVE3 1493 aa20.88■□□□□ 0.93
EXTL3-203ENST00000517738 MYT1LQ9UL68 1186 aa20.88■□□□□ 0.93
EXTL3-203ENST00000517738 MROH2AA6NES4 1674 aa20.88■□□□□ 0.93
EXTL3-203ENST00000517738 UHRF1BP1Q6BDS2 1440 aa20.87■□□□□ 0.93
EXTL3-203ENST00000517738 HNRNPMP52272 730 aaKnown RBP eCLIP20.87■□□□□ 0.93
EXTL3-203ENST00000517738 ZNF777Q9ULD5 760 aaPredicted RBP20.87■□□□□ 0.93
EXTL3-203ENST00000517738 CEP162Q5TB80 1403 aa20.87■□□□□ 0.93
EXTL3-203ENST00000517738 CCNB3Q8WWL7 1395 aa20.86■□□□□ 0.93
EXTL3-203ENST00000517738 MBD5Q9P267 1494 aa20.86■□□□□ 0.93
EXTL3-203ENST00000517738 CNTLNQ9NXG0 1405 aa20.86■□□□□ 0.93
EXTL3-203ENST00000517738 MTUS2Q5JR59 1369 aa20.85■□□□□ 0.93
EXTL3-203ENST00000517738 SUPT6HQ7KZ85 1726 aaKnown RBP20.85■□□□□ 0.93
EXTL3-203ENST00000517738 SPAG9O60271 1321 aaKnown RBP20.84■□□□□ 0.93
EXTL3-203ENST00000517738 CFDP1Q9UEE9 299 aaPredicted RBP20.84■□□□□ 0.93
EXTL3-203ENST00000517738 A2MP01023 1474 aa20.82■□□□□ 0.92
EXTL3-203ENST00000517738 ZNF644Q9H582 1327 aaPredicted RBP20.81■□□□□ 0.92
EXTL3-203ENST00000517738 ADGBQ8N7X0 1667 aa20.8■□□□□ 0.92
EXTL3-203ENST00000517738 NPATQ14207 1427 aa20.79■□□□□ 0.92
EXTL3-203ENST00000517738 CERKQ8TCT0 537 aa20.79■□□□□ 0.92
EXTL3-203ENST00000517738 CLTCQ00610 1675 aaKnown RBP20.79■□□□□ 0.92
EXTL3-203ENST00000517738 ZMYM3Q14202 1370 aa20.76■□□□□ 0.91
EXTL3-203ENST00000517738 PTPRTO14522 1441 aa20.76■□□□□ 0.91
EXTL3-203ENST00000517738 NCOA1Q15788 1441 aa20.76■□□□□ 0.91
EXTL3-203ENST00000517738 RTEL1-TNFRSF6BF6WH68 1400 aa20.75■□□□□ 0.91
EXTL3-203ENST00000517738 NCOA2Q15596 1464 aa20.75■□□□□ 0.91
EXTL3-203ENST00000517738 ZNF142P52746 1687 aaPredicted RBP20.73■□□□□ 0.91
EXTL3-203ENST00000517738 PTPRKQ15262 1439 aa20.73■□□□□ 0.91
EXTL3-203ENST00000517738 MYO3AQ8NEV4 1616 aa20.73■□□□□ 0.91
EXTL3-203ENST00000517738 ESF1Q9H501 851 aaKnown RBP20.72■□□□□ 0.91
EXTL3-203ENST00000517738 LTBP4Q8N2S1 1624 aa20.71■□□□□ 0.91
EXTL3-203ENST00000517738 CAMSAP2Q08AD1 1489 aa20.71■□□□□ 0.91
EXTL3-203ENST00000517738 DMRT2Q9Y5R5 561 aa20.71■□□□□ 0.91
EXTL3-203ENST00000517738 CAMSAP1Q5T5Y3 1602 aa20.7■□□□□ 0.9
EXTL3-203ENST00000517738 CCDC141Q6ZP82 1450 aa20.69■□□□□ 0.9
EXTL3-203ENST00000517738 VPS8Q8N3P4 1428 aa20.68■□□□□ 0.9
EXTL3-203ENST00000517738 DHX29Q7Z478 1369 aaKnown RBP20.67■□□□□ 0.9
EXTL3-203ENST00000517738 ARHGEF5Q12774 1597 aa20.67■□□□□ 0.9
EXTL3-203ENST00000517738 CEP170BQ9Y4F5 1589 aaPredicted RBP20.67■□□□□ 0.9
EXTL3-203ENST00000517738 LRRC9Q6ZRR7 1453 aa20.65■□□□□ 0.9
EXTL3-203ENST00000517738 PLA2R1Q13018 1463 aa20.64■□□□□ 0.89
EXTL3-203ENST00000517738 GGT6Q6P531 493 aa20.64■□□□□ 0.89
EXTL3-203ENST00000517738 PPP6R1Q9UPN7 881 aa20.64■□□□□ 0.89
EXTL3-203ENST00000517738 TCOF1Q13428 1488 aaKnown RBP20.63■□□□□ 0.89
EXTL3-203ENST00000517738 FAM135AQ9P2D6 1515 aa20.63■□□□□ 0.89
EXTL3-203ENST00000517738 MAP3K1Q13233 1512 aa20.62■□□□□ 0.89
EXTL3-203ENST00000517738 LOC105371045A0A1W2PR82 267 aa20.61■□□□□ 0.89
EXTL3-203ENST00000517738 MAST1Q9Y2H9 1570 aa20.59■□□□□ 0.89
EXTL3-203ENST00000517738 DNMT1P26358 1616 aaKnown RBP20.59■□□□□ 0.89
EXTL3-203ENST00000517738 KDM5DQ9BY66 1539 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms