RNA–Protein interactions for RNA: ENST00000517543.1

PAICSP4-201, Transcript of phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 4, humanhuman

BASIC

Gene PAICSP4, Length 1,253 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAICSP4-201ENST00000517543 SLAIN1Q8ND83 568 aa9.72□□□□□ -0.85
PAICSP4-201ENST00000517543 TSHZ2Q9NRE2 1034 aa9.72□□□□□ -0.85
PAICSP4-201ENST00000517543 NCKAP5LQ9HCH0 1330 aa9.7□□□□□ -0.86
PAICSP4-201ENST00000517543 KIF3CO14782 793 aa9.69□□□□□ -0.86
PAICSP4-201ENST00000517543 CRISPLD2Q9H0B8 497 aa9.69□□□□□ -0.86
PAICSP4-201ENST00000517543 C2orf72A6NCS6 295 aa9.68□□□□□ -0.86
PAICSP4-201ENST00000517543 HAP1P54257 671 aaPredicted RBP9.68□□□□□ -0.86
PAICSP4-201ENST00000517543 TMC2Q8TDI7 906 aa9.68□□□□□ -0.86
PAICSP4-201ENST00000517543 GPHNQ9NQX3 736 aaPredicted RBP9.65□□□□□ -0.86
PAICSP4-201ENST00000517543 PDE4AP27815 886 aa9.63□□□□□ -0.87
PAICSP4-201ENST00000517543 DSG2Q14126 1118 aa9.62□□□□□ -0.87
PAICSP4-201ENST00000517543 LARP6Q9BRS8 491 aaKnown RBP9.62□□□□□ -0.87
PAICSP4-201ENST00000517543 FOXK1P85037 733 aa9.61□□□□□ -0.87
PAICSP4-201ENST00000517543 MFSD10Q14728 455 aa9.61□□□□□ -0.87
PAICSP4-201ENST00000517543 DDX27Q96GQ7 796 aaKnown RBP9.6□□□□□ -0.87
PAICSP4-201ENST00000517543 NISCHQ9Y2I1 1504 aa9.6□□□□□ -0.87
PAICSP4-201ENST00000517543 PPP1R15BQ5SWA1 713 aa9.59□□□□□ -0.87
PAICSP4-201ENST00000517543 HOXB3P14651 431 aaPredicted RBP9.57□□□□□ -0.88
PAICSP4-201ENST00000517543 PLPP6Q8IY26 295 aa9.57□□□□□ -0.88
PAICSP4-201ENST00000517543 SNPHO15079 494 aa9.53□□□□□ -0.88
PAICSP4-201ENST00000517543 DOK7Q18PE1 504 aa9.53□□□□□ -0.88
PAICSP4-201ENST00000517543 KDM2AQ9Y2K7 1162 aa9.53□□□□□ -0.88
PAICSP4-201ENST00000517543 WDR70Q9NW82 654 aa9.51□□□□□ -0.89
PAICSP4-201ENST00000517543 VSIG10Q8N0Z9 540 aa9.5□□□□□ -0.89
PAICSP4-201ENST00000517543 SLC34A2O95436 690 aa9.49□□□□□ -0.89
PAICSP4-201ENST00000517543 CAMK2BQ13554 666 aa9.49□□□□□ -0.89
PAICSP4-201ENST00000517543 EMILIN3Q9NT22 766 aa9.48□□□□□ -0.89
PAICSP4-201ENST00000517543 RIMBP2O15034 1052 aa9.47□□□□□ -0.89
PAICSP4-201ENST00000517543 SLC24A1O60721 1099 aa9.47□□□□□ -0.89
PAICSP4-201ENST00000517543 LCE2DQ5TA82 110 aaPredicted RBP9.47□□□□□ -0.89
PAICSP4-201ENST00000517543 ZNF710Q8N1W2 664 aa9.47□□□□□ -0.89
PAICSP4-201ENST00000517543 FAM163AQ96GL9 167 aaPredicted RBP9.47□□□□□ -0.89
PAICSP4-201ENST00000517543 ST18O60284 1047 aa9.46□□□□□ -0.9
PAICSP4-201ENST00000517543 E2F4Q16254 413 aa9.46□□□□□ -0.9
PAICSP4-201ENST00000517543 OXER1Q8TDS5 423 aa9.46□□□□□ -0.9
PAICSP4-201ENST00000517543 PTCD2Q8WV60 388 aaKnown RBP9.46□□□□□ -0.9
PAICSP4-201ENST00000517543 UPF1Q92900 1129 aaKnown RBP eCLIP9.46□□□□□ -0.9
PAICSP4-201ENST00000517543 ZSWIM6Q9HCJ5 1215 aa9.45□□□□□ -0.9
PAICSP4-201ENST00000517543 PCDHGA4Q9Y5G9 962 aa9.45□□□□□ -0.9
PAICSP4-201ENST00000517543 GPR153Q6NV75 609 aa9.44□□□□□ -0.9
PAICSP4-201ENST00000517543 ARSIQ5FYB1 569 aa9.43□□□□□ -0.9
PAICSP4-201ENST00000517543 KCNV2Q8TDN2 545 aa9.43□□□□□ -0.9
PAICSP4-201ENST00000517543 KHSRPQ92945 711 aaKnown RBP eCLIP9.43□□□□□ -0.9
PAICSP4-201ENST00000517543 HOXB1P14653 301 aaPredicted RBP9.42□□□□□ -0.9
PAICSP4-201ENST00000517543 DPYSL4O14531 572 aa9.4□□□□□ -0.9
PAICSP4-201ENST00000517543 NUDT7P0C024 238 aa9.39□□□□□ -0.91
PAICSP4-201ENST00000517543 P3H3Q8IVL6 736 aa9.39□□□□□ -0.91
PAICSP4-201ENST00000517543 TBC1D12O60347 775 aa9.38□□□□□ -0.91
PAICSP4-201ENST00000517543 MARVELD3Q96A59 401 aa9.38□□□□□ -0.91
PAICSP4-201ENST00000517543 KDM4FA0A1W2PPD8 638 aa9.37□□□□□ -0.91
PAICSP4-201ENST00000517543 MAP3K9P80192 1104 aa9.37□□□□□ -0.91
PAICSP4-201ENST00000517543 ARIH1Q9Y4X5 557 aaPredicted RBP9.37□□□□□ -0.91
PAICSP4-201ENST00000517543 EMP3P54852 163 aa9.35□□□□□ -0.91
PAICSP4-201ENST00000517543 ARHGEF1Q92888 912 aaKnown RBP9.35□□□□□ -0.91
PAICSP4-201ENST00000517543 EVI5O60447 810 aa9.34□□□□□ -0.91
PAICSP4-201ENST00000517543 PDIA6Q15084 440 aa9.34□□□□□ -0.91
PAICSP4-201ENST00000517543 ZNF316A6NFI3 1004 aaPredicted RBP9.32□□□□□ -0.92
PAICSP4-201ENST00000517543 LHX6Q9UPM6 363 aa9.31□□□□□ -0.92
PAICSP4-201ENST00000517543 ANO8Q9HCE9 1232 aaPredicted RBP9.3□□□□□ -0.92
PAICSP4-201ENST00000517543 FAM205CA6NFA0 338 aa9.29□□□□□ -0.92
PAICSP4-201ENST00000517543 SPDYE16A6NNV3 312 aaPredicted RBP9.29□□□□□ -0.92
PAICSP4-201ENST00000517543 ERBB3P21860 1342 aa9.29□□□□□ -0.92
PAICSP4-201ENST00000517543 POTEMA6NI47 508 aa9.28□□□□□ -0.92
PAICSP4-201ENST00000517543 VARS2Q5ST30 1063 aaKnown RBP9.28□□□□□ -0.92
PAICSP4-201ENST00000517543 POTEGQ6S5H5 508 aa9.28□□□□□ -0.92
PAICSP4-201ENST00000517543 POTEB3A0JP26 581 aa9.27□□□□□ -0.93
PAICSP4-201ENST00000517543 POTEBQ6S5H4 581 aa9.27□□□□□ -0.93
PAICSP4-201ENST00000517543 HS3ST6Q96QI5 342 aa9.27□□□□□ -0.93
PAICSP4-201ENST00000517543 PTGER2P43116 358 aa9.24□□□□□ -0.93
PAICSP4-201ENST00000517543 FOSBP53539 338 aa9.24□□□□□ -0.93
PAICSP4-201ENST00000517543 ZNF454Q8N9F8 522 aa9.24□□□□□ -0.93
PAICSP4-201ENST00000517543 DDX12PQ92771 950 aa9.24□□□□□ -0.93
PAICSP4-201ENST00000517543 JPH4Q96JJ6 628 aa9.24□□□□□ -0.93
PAICSP4-201ENST00000517543 PSDA5PKW4 1024 aaPredicted RBP9.23□□□□□ -0.93
PAICSP4-201ENST00000517543 SEMA3EO15041 775 aa9.23□□□□□ -0.93
PAICSP4-201ENST00000517543 PHF14O94880 888 aa9.21□□□□□ -0.94
PAICSP4-201ENST00000517543 MLLT3P42568 568 aaPredicted RBP9.21□□□□□ -0.94
PAICSP4-201ENST00000517543 PPP4R3BQ5MIZ7 849 aa9.21□□□□□ -0.94
PAICSP4-201ENST00000517543 PCDHGA10Q9Y5H3 936 aa9.21□□□□□ -0.94
PAICSP4-201ENST00000517543 GRXCR2A6NFK2 248 aa9.2□□□□□ -0.94
PAICSP4-201ENST00000517543 NBR1Q14596 966 aa9.19□□□□□ -0.94
PAICSP4-201ENST00000517543 TESPA1A2RU30 521 aaPredicted RBP9.18□□□□□ -0.94
PAICSP4-201ENST00000517543 TYW1BQ6NUM6 668 aa9.18□□□□□ -0.94
PAICSP4-201ENST00000517543 ZNF687Q8N1G0 1237 aa9.18□□□□□ -0.94
PAICSP4-201ENST00000517543 ZDHHC16Q969W1 377 aa9.18□□□□□ -0.94
PAICSP4-201ENST00000517543 EPAS1Q99814 870 aa9.17□□□□□ -0.94
PAICSP4-201ENST00000517543 ADAM33Q9BZ11 813 aa9.17□□□□□ -0.94
PAICSP4-201ENST00000517543 PRIM1P49642 420 aaKnown RBP9.16□□□□□ -0.94
PAICSP4-201ENST00000517543 POTEEQ6S8J3 1075 aa9.16□□□□□ -0.94
PAICSP4-201ENST00000517543 FBXW7Q969H0 707 aa9.16□□□□□ -0.94
PAICSP4-201ENST00000517543 OSBPP22059 807 aa9.15□□□□□ -0.94
PAICSP4-201ENST00000517543 BCL2L12Q9HB09 334 aa9.15□□□□□ -0.94
PAICSP4-201ENST00000517543 EN1Q05925 392 aaPredicted RBP9.14□□□□□ -0.95
PAICSP4-201ENST00000517543 CDAN1Q8IWY9 1227 aa9.14□□□□□ -0.95
PAICSP4-201ENST00000517543 RBM33Q96EV2 1170 aaKnown RBP9.14□□□□□ -0.95
PAICSP4-201ENST00000517543 PBX2P40425 430 aa9.12□□□□□ -0.95
PAICSP4-201ENST00000517543 KCNK17Q96T54 332 aa9.12□□□□□ -0.95
PAICSP4-201ENST00000517543 KRTAP3-3Q9BYR6 98 aa9.12□□□□□ -0.95
PAICSP4-201ENST00000517543 KRTAP3-2Q9BYR7 98 aa9.12□□□□□ -0.95
PAICSP4-201ENST00000517543 AXIN2Q9Y2T1 843 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms