RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 CCNB3Q8WWL7 1395 aa15.4■□□□□ 0.06
CLN8-202ENST00000517514 SAMD9LQ8IVG5 1584 aa15.4■□□□□ 0.06
CLN8-202ENST00000517514 MYOM3Q5VTT5 1437 aa15.39■□□□□ 0.05
CLN8-202ENST00000517514 ARHGAP5Q13017 1502 aa15.38■□□□□ 0.05
CLN8-202ENST00000517514 FANCAO15360 1455 aa15.38■□□□□ 0.05
CLN8-202ENST00000517514 CFAP74Q9C0B2 1584 aa15.36■□□□□ 0.05
CLN8-202ENST00000517514 NEO1Q92859 1461 aa15.36■□□□□ 0.05
CLN8-202ENST00000517514 ARHGEF12Q9NZN5 1544 aa15.36■□□□□ 0.05
CLN8-202ENST00000517514 TEX14Q8IWB6 1497 aa15.35■□□□□ 0.05
CLN8-202ENST00000517514 COL17A1Q9UMD9 1497 aaPredicted RBP15.35■□□□□ 0.05
CLN8-202ENST00000517514 ABCC1P33527 1531 aa15.35■□□□□ 0.05
CLN8-202ENST00000517514 ZNF644Q9H582 1327 aaPredicted RBP15.35■□□□□ 0.05
CLN8-202ENST00000517514 FGD6Q6ZV73 1430 aa15.34■□□□□ 0.05
CLN8-202ENST00000517514 AKNAQ7Z591 1439 aa15.34■□□□□ 0.05
CLN8-202ENST00000517514 PTPN23Q9H3S7 1636 aa15.34■□□□□ 0.05
CLN8-202ENST00000517514 MIA2Q96PC5 1412 aa15.34■□□□□ 0.05
CLN8-202ENST00000517514 EFCAB2Q5VUJ9 269 aa15.33■□□□□ 0.04
CLN8-202ENST00000517514 CFDP1Q9UEE9 299 aaPredicted RBP15.33■□□□□ 0.04
CLN8-202ENST00000517514 TCOF1Q13428 1488 aaKnown RBP15.33■□□□□ 0.04
CLN8-202ENST00000517514 FRMPD1Q5SYB0 1578 aa15.32■□□□□ 0.04
CLN8-202ENST00000517514 CAMSAP2Q08AD1 1489 aa15.32■□□□□ 0.04
CLN8-202ENST00000517514 RICTORQ6R327 1708 aa15.31■□□□□ 0.04
CLN8-202ENST00000517514 SYCP2Q9BX26 1530 aa15.31■□□□□ 0.04
CLN8-202ENST00000517514 ADGRL1O94910 1474 aa15.3■□□□□ 0.04
CLN8-202ENST00000517514 MBD5Q9P267 1494 aa15.3■□□□□ 0.04
CLN8-202ENST00000517514 RRBP1Q9P2E9 1410 aaKnown RBP15.29■□□□□ 0.04
CLN8-202ENST00000517514 SCAPERQ9BY12 1400 aa15.28■□□□□ 0.04
CLN8-202ENST00000517514 KIAA1107Q9UPP5 1409 aa15.28■□□□□ 0.04
CLN8-202ENST00000517514 ZNF777Q9ULD5 760 aaPredicted RBP15.28■□□□□ 0.04
CLN8-202ENST00000517514 KDM6BO15054 1643 aa15.28■□□□□ 0.04
CLN8-202ENST00000517514 TRAPPC8Q9Y2L5 1435 aa15.27■□□□□ 0.04
CLN8-202ENST00000517514 HNRNPMP52272 730 aaKnown RBP eCLIP15.26■□□□□ 0.03
CLN8-202ENST00000517514 ARHGEF5Q12774 1597 aa15.26■□□□□ 0.03
CLN8-202ENST00000517514 PLEKHH2Q8IVE3 1493 aa15.26■□□□□ 0.03
CLN8-202ENST00000517514 POGZQ7Z3K3 1410 aa15.26■□□□□ 0.03
CLN8-202ENST00000517514 DENND4BO75064 1496 aaPredicted RBP15.25■□□□□ 0.03
CLN8-202ENST00000517514 DNMT1P26358 1616 aaKnown RBP15.25■□□□□ 0.03
CLN8-202ENST00000517514 KDM5CP41229 1560 aa15.24■□□□□ 0.03
CLN8-202ENST00000517514 RAPGEF3O95398 923 aa15.24■□□□□ 0.03
CLN8-202ENST00000517514 CROCC2H7BZ55 1655 aa15.24■□□□□ 0.03
CLN8-202ENST00000517514 AFAP1Q8N556 730 aa15.22■□□□□ 0.03
CLN8-202ENST00000517514 ABCC5O15440 1437 aa15.22■□□□□ 0.03
CLN8-202ENST00000517514 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.22■□□□□ 0.03
CLN8-202ENST00000517514 ZMYM4Q5VZL5 1548 aa15.22■□□□□ 0.03
CLN8-202ENST00000517514 KIDINS220Q9ULH0 1771 aa15.21■□□□□ 0.03
CLN8-202ENST00000517514 PTPRKQ15262 1439 aa15.21■□□□□ 0.03
CLN8-202ENST00000517514 ZNF518AQ6AHZ1 1483 aa15.2■□□□□ 0.02
CLN8-202ENST00000517514 CCDC141Q6ZP82 1450 aa15.2■□□□□ 0.02
CLN8-202ENST00000517514 INO80Q9ULG1 1556 aaPredicted RBP15.2■□□□□ 0.02
CLN8-202ENST00000517514 DAPK1P53355 1430 aa15.19■□□□□ 0.02
CLN8-202ENST00000517514 MAST1Q9Y2H9 1570 aa15.19■□□□□ 0.02
CLN8-202ENST00000517514 FAM50AQ14320 339 aaKnown RBP15.18■□□□□ 0.02
CLN8-202ENST00000517514 ZFYVE16Q7Z3T8 1539 aa15.17■□□□□ 0.02
CLN8-202ENST00000517514 HECW2Q9P2P5 1572 aa15.17■□□□□ 0.02
CLN8-202ENST00000517514 ABCA6Q8N139 1617 aa15.17■□□□□ 0.02
CLN8-202ENST00000517514 MLH3Q9UHC1 1453 aa15.16■□□□□ 0.02
CLN8-202ENST00000517514 SHANK2Q9UPX8 1470 aa15.15■□□□□ 0.02
CLN8-202ENST00000517514 SIGLEC1Q9BZZ2 1709 aa15.15■□□□□ 0.02
CLN8-202ENST00000517514 ATP7AQ04656 1500 aa15.15■□□□□ 0.02
CLN8-202ENST00000517514 YEATS2Q9ULM3 1422 aa15.15■□□□□ 0.02
CLN8-202ENST00000517514 ADGBQ8N7X0 1667 aa15.14■□□□□ 0.01
CLN8-202ENST00000517514 DIP2CQ9Y2E4 1556 aa15.14■□□□□ 0.01
CLN8-202ENST00000517514 ARHGEF40Q8TER5 1519 aa15.13■□□□□ 0.01
CLN8-202ENST00000517514 RSPH4AQ5TD94 716 aa15.13■□□□□ 0.01
CLN8-202ENST00000517514 C9orf84Q5VXU9 1444 aa15.13■□□□□ 0.01
CLN8-202ENST00000517514 RTEL1-TNFRSF6BF6WH68 1400 aa15.12■□□□□ 0.01
CLN8-202ENST00000517514 ADGRL2O95490 1459 aa15.12■□□□□ 0.01
CLN8-202ENST00000517514 MAGI2Q86UL8 1455 aa15.12■□□□□ 0.01
CLN8-202ENST00000517514 SPAG9O60271 1321 aaKnown RBP15.12■□□□□ 0.01
CLN8-202ENST00000517514 PLXNC1O60486 1568 aa15.11■□□□□ 0.01
CLN8-202ENST00000517514 NCOA1Q15788 1441 aa15.09■□□□□ 0.01
CLN8-202ENST00000517514 ITGAEP38570 1179 aa15.08■□□□□ 0
CLN8-202ENST00000517514 CHIC2Q9UKJ5 165 aa15.08■□□□□ 0
CLN8-202ENST00000517514 TSPY4P0CV99 314 aa15.07■□□□□ 0
CLN8-202ENST00000517514 TSPY10P0CW01 314 aa15.07■□□□□ 0
CLN8-202ENST00000517514 REREQ9P2R6 1566 aa15.07■□□□□ 0
CLN8-202ENST00000517514 ATP10AO60312 1499 aa15.06■□□□□ 0
CLN8-202ENST00000517514 ROCK1Q13464 1354 aa15.05■□□□□ -0
CLN8-202ENST00000517514 GCC2Q8IWJ2 1684 aa15.03■□□□□ -0
CLN8-202ENST00000517514 A2MP01023 1474 aa15.03■□□□□ -0
CLN8-202ENST00000517514 DUOX2Q9NRD8 1548 aa15.02■□□□□ -0
CLN8-202ENST00000517514 ANKRD30AQ9BXX3 1397 aa15.02■□□□□ -0
CLN8-202ENST00000517514 KIF15Q9NS87 1388 aa15.02■□□□□ -0
CLN8-202ENST00000517514 RRP7BPQ9NSQ0 103 aa15.02■□□□□ -0
CLN8-202ENST00000517514 BCORL1Q5H9F3 1711 aa15.02□□□□□ -0.01
CLN8-202ENST00000517514 NAIPQ13075 1403 aa15.01□□□□□ -0.01
CLN8-202ENST00000517514 DHX29Q7Z478 1369 aaKnown RBP15.01□□□□□ -0.01
CLN8-202ENST00000517514 TRIM26Q12899 539 aaPredicted RBP15.01□□□□□ -0.01
CLN8-202ENST00000517514 AGLP35573 1532 aa15.01□□□□□ -0.01
CLN8-202ENST00000517514 MYT1LQ9UL68 1186 aa15□□□□□ -0.01
CLN8-202ENST00000517514 HFM1A2PYH4 1435 aa14.99□□□□□ -0.01
CLN8-202ENST00000517514 EIF2AK4Q9P2K8 1649 aaKnown RBP14.99□□□□□ -0.01
CLN8-202ENST00000517514 MROH1Q8NDA8 1641 aa14.98□□□□□ -0.01
CLN8-202ENST00000517514 RNF17Q9BXT8 1623 aaKnown RBP14.97□□□□□ -0.01
CLN8-202ENST00000517514 DEPDC5O75140 1603 aa14.96□□□□□ -0.01
CLN8-202ENST00000517514 ERBINQ96RT1 1412 aa14.96□□□□□ -0.01
CLN8-202ENST00000517514 ANKRD50Q9ULJ7 1429 aa14.96□□□□□ -0.01
CLN8-202ENST00000517514 UNC13BO14795 1591 aa14.93□□□□□ -0.02
CLN8-202ENST00000517514 ADAMTSL3P82987 1691 aa14.93□□□□□ -0.02
CLN8-202ENST00000517514 SETD5Q9C0A6 1442 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms