RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 MNX1P50219 401 aaPredicted RBP2.41□□□□□ -2.02
SNORA40.16-201ENST00000517238 MKRN4PQ13434 485 aaPredicted RBP2.4□□□□□ -2.03
SNORA40.16-201ENST00000517238 AXIN2Q9Y2T1 843 aa2.39□□□□□ -2.03
SNORA40.16-201ENST00000517238 NFX1Q12986 1120 aaKnown RBP2.38□□□□□ -2.03
SNORA40.16-201ENST00000517238 STAC3Q96MF2 364 aa2.38□□□□□ -2.03
SNORA40.16-201ENST00000517238 ZSWIM6Q9HCJ5 1215 aa2.37□□□□□ -2.03
SNORA40.16-201ENST00000517238 PDZRN3Q9UPQ7 1066 aa2.37□□□□□ -2.03
SNORA40.16-201ENST00000517238 POTEEQ6S8J3 1075 aa2.36□□□□□ -2.03
SNORA40.16-201ENST00000517238 PCDHB13Q9Y5F0 798 aa2.36□□□□□ -2.03
SNORA40.16-201ENST00000517238 ZNF316A6NFI3 1004 aaPredicted RBP2.35□□□□□ -2.03
SNORA40.16-201ENST00000517238 LAMC2Q13753 1193 aa2.35□□□□□ -2.03
SNORA40.16-201ENST00000517238 KRTAP19-1Q8IUB9 90 aa2.35□□□□□ -2.03
SNORA40.16-201ENST00000517238 PDCD7Q8N8D1 485 aaKnown RBP2.35□□□□□ -2.03
SNORA40.16-201ENST00000517238 KRTAP4-5Q9BYR2 181 aa2.35□□□□□ -2.03
SNORA40.16-201ENST00000517238 STAG3Q9UJ98 1225 aa2.35□□□□□ -2.03
SNORA40.16-201ENST00000517238 Q8N3U1 123 aa2.34□□□□□ -2.03
SNORA40.16-201ENST00000517238 ZSCAN1Q8NBB4 408 aa2.34□□□□□ -2.03
SNORA40.16-201ENST00000517238 GPR153Q6NV75 609 aa2.33□□□□□ -2.04
SNORA40.16-201ENST00000517238 SGIP1Q9BQI5 828 aa2.33□□□□□ -2.04
SNORA40.16-201ENST00000517238 HRO43593 1189 aa2.32□□□□□ -2.04
SNORA40.16-201ENST00000517238 COBLO75128 1261 aa2.32□□□□□ -2.04
SNORA40.16-201ENST00000517238 TMEM151AQ8N4L1 468 aa2.32□□□□□ -2.04
SNORA40.16-201ENST00000517238 PRKD2Q9BZL6 878 aa2.32□□□□□ -2.04
SNORA40.16-201ENST00000517238 ITGBL1O95965 494 aaPredicted RBP2.31□□□□□ -2.04
SNORA40.16-201ENST00000517238 MYT1Q01538 1121 aa2.31□□□□□ -2.04
SNORA40.16-201ENST00000517238 KCNMA1Q12791 1236 aa2.31□□□□□ -2.04
SNORA40.16-201ENST00000517238 PKDCCQ504Y2 493 aa2.31□□□□□ -2.04
SNORA40.16-201ENST00000517238 GPAT2Q6NUI2 795 aa2.31□□□□□ -2.04
SNORA40.16-201ENST00000517238 KRTAP4-11Q9BYQ6 195 aa2.31□□□□□ -2.04
SNORA40.16-201ENST00000517238 GDF11O95390 407 aa2.3□□□□□ -2.04
SNORA40.16-201ENST00000517238 LCE2CQ5TA81 110 aa2.3□□□□□ -2.04
SNORA40.16-201ENST00000517238 IFNL1Q8IU54 200 aa2.3□□□□□ -2.04
SNORA40.16-201ENST00000517238 GOLGA2P5Q9HBQ8 144 aa2.3□□□□□ -2.04
SNORA40.16-201ENST00000517238 G3V3G9 751 aa2.29□□□□□ -2.04
SNORA40.16-201ENST00000517238 TK2O00142 265 aa2.29□□□□□ -2.04
SNORA40.16-201ENST00000517238 ARSIQ5FYB1 569 aa2.29□□□□□ -2.04
SNORA40.16-201ENST00000517238 DCAF8Q5TAQ9 597 aa2.29□□□□□ -2.04
SNORA40.16-201ENST00000517238 THSD4Q6ZMP0 1018 aa2.29□□□□□ -2.04
SNORA40.16-201ENST00000517238 ADAM23O75077 832 aa2.28□□□□□ -2.04
SNORA40.16-201ENST00000517238 IGHA1P01876 353 aa2.27□□□□□ -2.05
SNORA40.16-201ENST00000517238 GSK3AP49840 483 aa2.27□□□□□ -2.05
SNORA40.16-201ENST00000517238 ARHGAP33O14559 1287 aa2.26□□□□□ -2.05
SNORA40.16-201ENST00000517238 RASSF7Q02833 373 aa2.25□□□□□ -2.05
SNORA40.16-201ENST00000517238 KHSRPQ92945 711 aaKnown RBP eCLIP2.25□□□□□ -2.05
SNORA40.16-201ENST00000517238 C11orf95C9JLR9 678 aaPredicted RBP2.24□□□□□ -2.05
SNORA40.16-201ENST00000517238 DGAT1O75907 488 aa2.24□□□□□ -2.05
SNORA40.16-201ENST00000517238 KCNC4Q03721 635 aa2.24□□□□□ -2.05
SNORA40.16-201ENST00000517238 DMRTA1Q5VZB9 504 aa2.24□□□□□ -2.05
SNORA40.16-201ENST00000517238 EHMT2Q96KQ7 1210 aa2.24□□□□□ -2.05
SNORA40.16-201ENST00000517238 V9GY48 417 aaPredicted RBP2.24□□□□□ -2.05
SNORA40.16-201ENST00000517238 TERTO14746 1132 aaKnown RBP2.23□□□□□ -2.05
SNORA40.16-201ENST00000517238 ST8SIA5O15466 376 aa2.23□□□□□ -2.05
SNORA40.16-201ENST00000517238 GOLGA8CPA6NN73 597 aa2.22□□□□□ -2.05
SNORA40.16-201ENST00000517238 GOLGA2Q08379 1002 aa2.22□□□□□ -2.05
SNORA40.16-201ENST00000517238 MKRN3Q13064 507 aaKnown RBP2.22□□□□□ -2.05
SNORA40.16-201ENST00000517238 WNT2BQ93097 391 aa2.22□□□□□ -2.05
SNORA40.16-201ENST00000517238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.22□□□□□ -2.05
SNORA40.16-201ENST00000517238 BOLA1Q9Y3E2 137 aa2.22□□□□□ -2.05
SNORA40.16-201ENST00000517238 ARID1BQ8NFD5 2236 aaPredicted RBP2.21□□□□□ -2.06
SNORA40.16-201ENST00000517238 GMPRP36959 345 aa2.19□□□□□ -2.06
SNORA40.16-201ENST00000517238 PSEN2P49810 448 aa2.19□□□□□ -2.06
SNORA40.16-201ENST00000517238 RASEFQ8IZ41 740 aa2.19□□□□□ -2.06
SNORA40.16-201ENST00000517238 AAASQ9NRG9 546 aa2.19□□□□□ -2.06
SNORA40.16-201ENST00000517238 GMPR2Q9P2T1 348 aaKnown RBP2.19□□□□□ -2.06
SNORA40.16-201ENST00000517238 FAM187AA6NFU0 413 aa2.18□□□□□ -2.06
SNORA40.16-201ENST00000517238 RNF225M0QZC1 329 aaPredicted RBP2.18□□□□□ -2.06
SNORA40.16-201ENST00000517238 DPY19L2Q6NUT2 758 aa2.18□□□□□ -2.06
SNORA40.16-201ENST00000517238 LHX6Q9UPM6 363 aa2.18□□□□□ -2.06
SNORA40.16-201ENST00000517238 DNMT3AQ9Y6K1 912 aaPredicted RBP2.18□□□□□ -2.06
SNORA40.16-201ENST00000517238 FOXK2Q01167 660 aa2.17□□□□□ -2.06
SNORA40.16-201ENST00000517238 NUDT7P0C024 238 aa2.16□□□□□ -2.06
SNORA40.16-201ENST00000517238 SLC16A10Q8TF71 515 aa2.16□□□□□ -2.06
SNORA40.16-201ENST00000517238 K7ELQ4 463 aaPredicted RBP2.13□□□□□ -2.07
SNORA40.16-201ENST00000517238 TRIM67Q6ZTA4 783 aa2.13□□□□□ -2.07
SNORA40.16-201ENST00000517238 DACH1Q9UI36 760 aa2.13□□□□□ -2.07
SNORA40.16-201ENST00000517238 YBX3P16989 372 aaKnown RBP eCLIP2.12□□□□□ -2.07
SNORA40.16-201ENST00000517238 IRF7Q92985 503 aa2.12□□□□□ -2.07
SNORA40.16-201ENST00000517238 VPS9D1Q9Y2B5 631 aa2.12□□□□□ -2.07
SNORA40.16-201ENST00000517238 MSTNO14793 375 aa2.11□□□□□ -2.07
SNORA40.16-201ENST00000517238 MRPL50Q8N5N7 158 aaKnown RBP2.11□□□□□ -2.07
SNORA40.16-201ENST00000517238 PPP1R18Q6NYC8 613 aa2.1□□□□□ -2.07
SNORA40.16-201ENST00000517238 KCNH8Q96L42 1107 aa2.1□□□□□ -2.07
SNORA40.16-201ENST00000517238 PSDA5PKW4 1024 aaPredicted RBP2.09□□□□□ -2.07
SNORA40.16-201ENST00000517238 TMEM92Q6UXU6 159 aa2.09□□□□□ -2.07
SNORA40.16-201ENST00000517238 NYAP1Q6ZVC0 841 aa2.09□□□□□ -2.07
SNORA40.16-201ENST00000517238 SNRPBP14678 240 aaKnown RBP2.08□□□□□ -2.08
SNORA40.16-201ENST00000517238 KRTAP1-1Q07627 177 aa2.08□□□□□ -2.08
SNORA40.16-201ENST00000517238 FZD5Q13467 585 aa2.08□□□□□ -2.08
SNORA40.16-201ENST00000517238 ILDR1Q86SU0 546 aaPredicted RBP2.08□□□□□ -2.08
SNORA40.16-201ENST00000517238 GALNT6Q8NCL4 622 aa2.08□□□□□ -2.08
SNORA40.16-201ENST00000517238 SLURP2P0DP57 97 aa2.07□□□□□ -2.08
SNORA40.16-201ENST00000517238 IRS1P35568 1242 aa2.07□□□□□ -2.08
SNORA40.16-201ENST00000517238 PRR20EP86478 221 aa2.07□□□□□ -2.08
SNORA40.16-201ENST00000517238 PRR20CP86479 221 aa2.07□□□□□ -2.08
SNORA40.16-201ENST00000517238 PRR20DP86480 221 aa2.07□□□□□ -2.08
SNORA40.16-201ENST00000517238 PRR20BP86481 221 aa2.07□□□□□ -2.08
SNORA40.16-201ENST00000517238 PRR20AP86496 221 aa2.07□□□□□ -2.08
SNORA40.16-201ENST00000517238 KCNK17Q96T54 332 aa2.07□□□□□ -2.08
SNORA40.16-201ENST00000517238 AXIN1O15169 862 aa2.06□□□□□ -2.08
SNORA40.16-201ENST00000517238 CRIPAKQ8N1N5 446 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms