RNA–Protein interactions for RNA: ENST00000517146.1

RNU4ATAC9P-201, Transcript of RNA, U4atac small nuclear 9, pseudogene, humanhuman

BASIC

Gene RNU4ATAC9P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC9P-201ENST00000517146 A0A0G2JS52 829 aa3.54□□□□□ -1.84
RNU4ATAC9P-201ENST00000517146 IFFO2Q5TF58 517 aa3.54□□□□□ -1.84
RNU4ATAC9P-201ENST00000517146 KLHL34Q8N239 644 aa3.54□□□□□ -1.84
RNU4ATAC9P-201ENST00000517146 KCNH8Q96L42 1107 aa3.54□□□□□ -1.84
RNU4ATAC9P-201ENST00000517146 AXIN2Q9Y2T1 843 aa3.54□□□□□ -1.84
RNU4ATAC9P-201ENST00000517146 PSDA5PKW4 1024 aaPredicted RBP3.53□□□□□ -1.84
RNU4ATAC9P-201ENST00000517146 TK2O00142 265 aa3.52□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 ARHGAP33O14559 1287 aa3.52□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 LAPTM4AQ15012 233 aa3.52□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 KHSRPQ92945 711 aaKnown RBP eCLIP3.52□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 NUDT7P0C024 238 aa3.51□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 PTPN5P54829 565 aa3.51□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 TMEM92Q6UXU6 159 aa3.5□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 LHX6Q9UPM6 363 aa3.5□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 EFCAB3Q8N7B9 438 aa3.49□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 FBXO3Q9UK99 471 aa3.49□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 GOLGA8CPA6NN73 597 aa3.48□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 HRO43593 1189 aa3.47□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 SOX12O15370 315 aa3.46□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 PPP4R3BQ5MIZ7 849 aa3.46□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 TRAF7Q6Q0C0 670 aa3.46□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 POTEEQ6S8J3 1075 aa3.46□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 CIZ1Q9ULV3 898 aaPredicted RBP3.46□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 EHMT2Q96KQ7 1210 aa3.45□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 PCDHGA4Q9Y5G9 962 aa3.45□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 PSEN2P49810 448 aa3.44□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 DMRTA1Q5VZB9 504 aa3.44□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 THSD4Q6ZMP0 1018 aa3.43□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 WNT2BQ93097 391 aa3.43□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 KCNK17Q96T54 332 aa3.43□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 GFRA3O60609 400 aa3.42□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 SLC34A2O95436 690 aa3.42□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 ZNF787Q6DD87 383 aa3.42□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 TMC2Q8TDI7 906 aa3.42□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 NLRP6P59044 892 aa3.41□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 MRPL50Q8N5N7 158 aaKnown RBP3.41□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 TRIM41Q8WV44 630 aa3.41□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 C2orf72A6NCS6 295 aa3.4□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 VASPP50552 380 aaPredicted RBP3.4□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 NBPF3Q9H094 633 aa3.4□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 PHF8Q9UPP1 1060 aa3.4□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 NRG2O14511 850 aaPredicted RBP3.39□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 ITGBL1O95965 494 aaPredicted RBP3.39□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 SPOCK2Q92563 424 aa3.39□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 MS4A4AQ96JQ5 239 aa3.39□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 VPS9D1Q9Y2B5 631 aa3.39□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 FKBP8Q14318 412 aa3.38□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 TBC1D12O60347 775 aa3.37□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 KCNC4Q03721 635 aa3.37□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 NYAP1Q6ZVC0 841 aa3.37□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 ANKK1Q8NFD2 765 aa3.37□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 ZNF775Q96BV0 537 aaPredicted RBP3.37□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 KIF3CO14782 793 aa3.36□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 LCE2BO14633 110 aa3.35□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 RIOK3O14730 519 aaKnown RBP3.35□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 SLC4A5Q9BY07 1137 aa3.35□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 VGFO15240 615 aaPredicted RBP3.34□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 PTPREP23469 700 aa3.34□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 TAOK2Q9UL54 1235 aa3.34□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.33□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 ZFP91Q96JP5 570 aaPredicted RBP3.33□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 BHMG1C9JSJ3 638 aaPredicted RBP3.32□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 ZNF454Q8N9F8 522 aa3.32□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 PTCD2Q8WV60 388 aaKnown RBP3.32□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 PRKD2Q9BZL6 878 aa3.32□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 BCL2L12Q9HB09 334 aa3.32□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 STK17AQ9UEE5 414 aa3.32□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 PDZRN3Q9UPQ7 1066 aa3.31□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 FBXO22Q8NEZ5 403 aa3.3□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 V9GY48 417 aaPredicted RBP3.3□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 KDM4FA0A1W2PPD8 638 aa3.29□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 BCAMP50895 628 aa3.29□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 ZBED2Q9BTP6 218 aa3.29□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 SOWAHBA6NEL2 793 aa3.28□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 TREML4Q6UXN2 200 aa3.28□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 BCL11BQ9C0K0 894 aaPredicted RBP3.28□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 STK24Q9Y6E0 443 aa3.28□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 INSM1Q01101 510 aaPredicted RBP3.27□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 PKDCCQ504Y2 493 aa3.27□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 LAPTM4BQ86VI4 370 aa3.27□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 PLPP6Q8IY26 295 aa3.27□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 LOC100996750A0A140TA64 210 aa3.26□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 MFRPQ9BY79 579 aa3.26□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 WBP1LQ9NX94 342 aa3.26□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 RABGEF1Q9UJ41 708 aa3.26□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 FAM181BA6NEQ2 426 aa3.25□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 GGCXP38435 758 aa3.25□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 FOXK1P85037 733 aa3.25□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 LRCH3Q96II8 777 aa3.25□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 TSR3Q9UJK0 312 aaKnown RBP3.25□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 HPS5Q9UPZ3 1129 aa3.25□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 PPP1R3GB7ZBB8 358 aa3.24□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 FOSBP53539 338 aa3.24□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 IFNLR1Q8IU57 520 aaPredicted RBP3.24□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 ZDHHC16Q969W1 377 aa3.24□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 JPH4Q96JJ6 628 aa3.24□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 ZFRQ96KR1 1074 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.24□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 STK25O00506 426 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms