RNA–Protein interactions for RNA: ENST00000517012.1

RNU6-388P-201, Transcript of RNA, U6 small nuclear 388, pseudogene, humanhuman

BASIC

Gene RNU6-388P, Length 105 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-388P-201ENST00000517012 LSM11P83369 360 aaKnown RBP eCLIP9.09□□□□□ -0.95
RNU6-388P-201ENST00000517012 ARSIQ5FYB1 569 aa9.09□□□□□ -0.95
RNU6-388P-201ENST00000517012 IFNLR1Q8IU57 520 aaPredicted RBP9.09□□□□□ -0.95
RNU6-388P-201ENST00000517012 PBX2P40425 430 aa9.05□□□□□ -0.96
RNU6-388P-201ENST00000517012 MS4A4AQ96JQ5 239 aa9.03□□□□□ -0.96
RNU6-388P-201ENST00000517012 PLA2G2EQ9NZK7 142 aa9.03□□□□□ -0.96
RNU6-388P-201ENST00000517012 HCSTQ9UBK5 93 aa9.02□□□□□ -0.97
RNU6-388P-201ENST00000517012 KHSRPQ92945 711 aaKnown RBP eCLIP8.99□□□□□ -0.97
RNU6-388P-201ENST00000517012 PHF8Q9UPP1 1060 aa8.99□□□□□ -0.97
RNU6-388P-201ENST00000517012 RIOK3O14730 519 aaKnown RBP8.98□□□□□ -0.97
RNU6-388P-201ENST00000517012 VGFO15240 615 aaPredicted RBP8.96□□□□□ -0.98
RNU6-388P-201ENST00000517012 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.95□□□□□ -0.98
RNU6-388P-201ENST00000517012 NLRP6P59044 892 aa8.95□□□□□ -0.98
RNU6-388P-201ENST00000517012 ZFP91Q96JP5 570 aaPredicted RBP8.95□□□□□ -0.98
RNU6-388P-201ENST00000517012 NUDT7P0C024 238 aa8.93□□□□□ -0.98
RNU6-388P-201ENST00000517012 KIF3CO14782 793 aa8.91□□□□□ -0.98
RNU6-388P-201ENST00000517012 SLC34A2O95436 690 aa8.91□□□□□ -0.98
RNU6-388P-201ENST00000517012 POTEEQ6S8J3 1075 aa8.91□□□□□ -0.98
RNU6-388P-201ENST00000517012 LHX6Q9UPM6 363 aa8.91□□□□□ -0.98
RNU6-388P-201ENST00000517012 AXIN2Q9Y2T1 843 aa8.9□□□□□ -0.98
RNU6-388P-201ENST00000517012 PSDA5PKW4 1024 aaPredicted RBP8.89□□□□□ -0.99
RNU6-388P-201ENST00000517012 ADGRD1Q6QNK2 874 aa8.89□□□□□ -0.99
RNU6-388P-201ENST00000517012 RNF25Q96BH1 459 aaPredicted RBP8.89□□□□□ -0.99
RNU6-388P-201ENST00000517012 C2orf72A6NCS6 295 aa8.88□□□□□ -0.99
RNU6-388P-201ENST00000517012 ARHGAP33O14559 1287 aa8.88□□□□□ -0.99
RNU6-388P-201ENST00000517012 FBXO22Q8NEZ5 403 aa8.88□□□□□ -0.99
RNU6-388P-201ENST00000517012 PCDHGA4Q9Y5G9 962 aa8.88□□□□□ -0.99
RNU6-388P-201ENST00000517012 TAOK2Q9UL54 1235 aa8.87□□□□□ -0.99
RNU6-388P-201ENST00000517012 TK2O00142 265 aa8.86□□□□□ -0.99
RNU6-388P-201ENST00000517012 HRO43593 1189 aa8.81□□□□□ -1
RNU6-388P-201ENST00000517012 BCL11BQ9C0K0 894 aaPredicted RBP8.81□□□□□ -1
RNU6-388P-201ENST00000517012 RGS20O76081 388 aa8.8□□□□□ -1
RNU6-388P-201ENST00000517012 TMC2Q8TDI7 906 aa8.8□□□□□ -1
RNU6-388P-201ENST00000517012 MFRPQ9BY79 579 aa8.8□□□□□ -1
RNU6-388P-201ENST00000517012 STAC3Q96MF2 364 aa8.78□□□□□ -1
RNU6-388P-201ENST00000517012 STK24Q9Y6E0 443 aa8.77□□□□□ -1.01
RNU6-388P-201ENST00000517012 KCTD12Q96CX2 325 aaKnown RBP8.76□□□□□ -1.01
RNU6-388P-201ENST00000517012 KDM4FA0A1W2PPD8 638 aa8.74□□□□□ -1.01
RNU6-388P-201ENST00000517012 IFFO2Q5TF58 517 aa8.74□□□□□ -1.01
RNU6-388P-201ENST00000517012 DMRTA1Q5VZB9 504 aa8.74□□□□□ -1.01
RNU6-388P-201ENST00000517012 PSEN2P49810 448 aa8.73□□□□□ -1.01
RNU6-388P-201ENST00000517012 PPP4R3BQ5MIZ7 849 aa8.73□□□□□ -1.01
RNU6-388P-201ENST00000517012 PTCD2Q8WV60 388 aaKnown RBP8.73□□□□□ -1.01
RNU6-388P-201ENST00000517012 KCNH8Q96L42 1107 aa8.72□□□□□ -1.01
RNU6-388P-201ENST00000517012 IRX2Q9BZI1 471 aaPredicted RBP8.71□□□□□ -1.02
RNU6-388P-201ENST00000517012 STK25O00506 426 aa8.7□□□□□ -1.02
RNU6-388P-201ENST00000517012 TBC1D12O60347 775 aa8.66□□□□□ -1.02
RNU6-388P-201ENST00000517012 PTPN5P54829 565 aa8.66□□□□□ -1.02
RNU6-388P-201ENST00000517012 A0A0G2JS52 829 aa8.64□□□□□ -1.03
RNU6-388P-201ENST00000517012 FOXK1P85037 733 aa8.64□□□□□ -1.03
RNU6-388P-201ENST00000517012 KCNK17Q96T54 332 aa8.64□□□□□ -1.03
RNU6-388P-201ENST00000517012 VPS9D1Q9Y2B5 631 aa8.64□□□□□ -1.03
RNU6-388P-201ENST00000517012 SLC4A5Q9BY07 1137 aa8.62□□□□□ -1.03
RNU6-388P-201ENST00000517012 PLPP6Q8IY26 295 aa8.61□□□□□ -1.03
RNU6-388P-201ENST00000517012 THSD4Q6ZMP0 1018 aa8.6□□□□□ -1.03
RNU6-388P-201ENST00000517012 PPP1R37O75864 691 aa8.58□□□□□ -1.04
RNU6-388P-201ENST00000517012 GPHNQ9NQX3 736 aaPredicted RBP8.58□□□□□ -1.04
RNU6-388P-201ENST00000517012 GOLGA8CPA6NN73 597 aa8.57□□□□□ -1.04
RNU6-388P-201ENST00000517012 BHMG1C9JSJ3 638 aaPredicted RBP8.57□□□□□ -1.04
RNU6-388P-201ENST00000517012 BCL2L12Q9HB09 334 aa8.56□□□□□ -1.04
RNU6-388P-201ENST00000517012 ECM2O94769 699 aaPredicted RBP8.54□□□□□ -1.04
RNU6-388P-201ENST00000517012 WNT2BQ93097 391 aa8.54□□□□□ -1.04
RNU6-388P-201ENST00000517012 DSG2Q14126 1118 aa8.53□□□□□ -1.04
RNU6-388P-201ENST00000517012 MRPL50Q8N5N7 158 aaKnown RBP8.53□□□□□ -1.04
RNU6-388P-201ENST00000517012 ZNF454Q8N9F8 522 aa8.53□□□□□ -1.04
RNU6-388P-201ENST00000517012 PTPREP23469 700 aa8.52□□□□□ -1.05
RNU6-388P-201ENST00000517012 ZBED2Q9BTP6 218 aa8.51□□□□□ -1.05
RNU6-388P-201ENST00000517012 NBPF3Q9H094 633 aa8.51□□□□□ -1.05
RNU6-388P-201ENST00000517012 OXER1Q8TDS5 423 aa8.5□□□□□ -1.05
RNU6-388P-201ENST00000517012 Q6ZNB5 142 aa8.49□□□□□ -1.05
RNU6-388P-201ENST00000517012 ITGBL1O95965 494 aaPredicted RBP8.47□□□□□ -1.05
RNU6-388P-201ENST00000517012 FOSBP53539 338 aa8.47□□□□□ -1.05
RNU6-388P-201ENST00000517012 RGL2O15211 777 aa8.46□□□□□ -1.06
RNU6-388P-201ENST00000517012 LAPTM4AQ15012 233 aa8.44□□□□□ -1.06
RNU6-388P-201ENST00000517012 UPF1Q92900 1129 aaKnown RBP eCLIP8.44□□□□□ -1.06
RNU6-388P-201ENST00000517012 JPH4Q96JJ6 628 aa8.43□□□□□ -1.06
RNU6-388P-201ENST00000517012 NYAP1Q6ZVC0 841 aa8.42□□□□□ -1.06
RNU6-388P-201ENST00000517012 ANKK1Q8NFD2 765 aa8.42□□□□□ -1.06
RNU6-388P-201ENST00000517012 ZDHHC16Q969W1 377 aa8.42□□□□□ -1.06
RNU6-388P-201ENST00000517012 ANO8Q9HCE9 1232 aaPredicted RBP8.42□□□□□ -1.06
RNU6-388P-201ENST00000517012 PKD2Q13563 968 aa8.39□□□□□ -1.07
RNU6-388P-201ENST00000517012 RABGEF1Q9UJ41 708 aa8.39□□□□□ -1.07
RNU6-388P-201ENST00000517012 ADAM33Q9BZ11 813 aa8.38□□□□□ -1.07
RNU6-388P-201ENST00000517012 KCNC4Q03721 635 aa8.37□□□□□ -1.07
RNU6-388P-201ENST00000517012 LAPTM4BQ86VI4 370 aa8.37□□□□□ -1.07
RNU6-388P-201ENST00000517012 PPP1R3GB7ZBB8 358 aa8.36□□□□□ -1.07
RNU6-388P-201ENST00000517012 PPP1R15BQ5SWA1 713 aa8.36□□□□□ -1.07
RNU6-388P-201ENST00000517012 CRISPLD2Q9H0B8 497 aa8.36□□□□□ -1.07
RNU6-388P-201ENST00000517012 SOWAHBA6NEL2 793 aa8.35□□□□□ -1.07
RNU6-388P-201ENST00000517012 EVI5O60447 810 aa8.35□□□□□ -1.07
RNU6-388P-201ENST00000517012 HS6ST3Q8IZP7 471 aa8.34□□□□□ -1.07
RNU6-388P-201ENST00000517012 TRAF7Q6Q0C0 670 aa8.33□□□□□ -1.08
RNU6-388P-201ENST00000517012 RYDENQ9NUL5 291 aaKnown RBP8.33□□□□□ -1.08
RNU6-388P-201ENST00000517012 BCAMP50895 628 aa8.32□□□□□ -1.08
RNU6-388P-201ENST00000517012 PDE4AP27815 886 aa8.3□□□□□ -1.08
RNU6-388P-201ENST00000517012 PROX2Q3B8N5 592 aa8.3□□□□□ -1.08
RNU6-388P-201ENST00000517012 ZFRQ96KR1 1074 aaKnown RBP8.3□□□□□ -1.08
RNU6-388P-201ENST00000517012 GFRA3O60609 400 aa8.29□□□□□ -1.08
RNU6-388P-201ENST00000517012 WBP1LQ9NX94 342 aa8.29□□□□□ -1.08
RNU6-388P-201ENST00000517012 ONECUT3O60422 494 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms