RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 VGFO15240 615 aaPredicted RBP4.29□□□□□ -1.72
RNU6-1258P-201ENST00000516911 NLRP6P59044 892 aa4.29□□□□□ -1.72
RNU6-1258P-201ENST00000516911 ARSIQ5FYB1 569 aa4.29□□□□□ -1.72
RNU6-1258P-201ENST00000516911 ZNF316A6NFI3 1004 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1258P-201ENST00000516911 GPR153Q6NV75 609 aa4.28□□□□□ -1.72
RNU6-1258P-201ENST00000516911 STAC3Q96MF2 364 aa4.28□□□□□ -1.72
RNU6-1258P-201ENST00000516911 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.27□□□□□ -1.73
RNU6-1258P-201ENST00000516911 ZFP91Q96JP5 570 aaPredicted RBP4.27□□□□□ -1.73
RNU6-1258P-201ENST00000516911 PHF8Q9UPP1 1060 aa4.27□□□□□ -1.73
RNU6-1258P-201ENST00000516911 PBX2P40425 430 aa4.25□□□□□ -1.73
RNU6-1258P-201ENST00000516911 LSM11P83369 360 aaKnown RBP eCLIP4.25□□□□□ -1.73
RNU6-1258P-201ENST00000516911 TMEM92Q6UXU6 159 aa4.25□□□□□ -1.73
RNU6-1258P-201ENST00000516911 HCSTQ9UBK5 93 aa4.25□□□□□ -1.73
RNU6-1258P-201ENST00000516911 TMC2Q8TDI7 906 aa4.24□□□□□ -1.73
RNU6-1258P-201ENST00000516911 PLA2G2EQ9NZK7 142 aa4.24□□□□□ -1.73
RNU6-1258P-201ENST00000516911 STK24Q9Y6E0 443 aa4.24□□□□□ -1.73
RNU6-1258P-201ENST00000516911 NUDT7P0C024 238 aa4.23□□□□□ -1.73
RNU6-1258P-201ENST00000516911 KCNH8Q96L42 1107 aa4.23□□□□□ -1.73
RNU6-1258P-201ENST00000516911 PSDA5PKW4 1024 aaPredicted RBP4.22□□□□□ -1.73
RNU6-1258P-201ENST00000516911 KHSRPQ92945 711 aaKnown RBP eCLIP4.22□□□□□ -1.73
RNU6-1258P-201ENST00000516911 BCL11BQ9C0K0 894 aaPredicted RBP4.22□□□□□ -1.73
RNU6-1258P-201ENST00000516911 STK25O00506 426 aa4.21□□□□□ -1.74
RNU6-1258P-201ENST00000516911 MS4A4AQ96JQ5 239 aa4.21□□□□□ -1.74
RNU6-1258P-201ENST00000516911 ARHGAP33O14559 1287 aa4.2□□□□□ -1.74
RNU6-1258P-201ENST00000516911 LHX6Q9UPM6 363 aa4.2□□□□□ -1.74
RNU6-1258P-201ENST00000516911 AXIN2Q9Y2T1 843 aa4.2□□□□□ -1.74
RNU6-1258P-201ENST00000516911 PCDHGA4Q9Y5G9 962 aa4.2□□□□□ -1.74
RNU6-1258P-201ENST00000516911 C2orf72A6NCS6 295 aa4.19□□□□□ -1.74
RNU6-1258P-201ENST00000516911 TBC1D12O60347 775 aa4.19□□□□□ -1.74
RNU6-1258P-201ENST00000516911 ECM2O94769 699 aaPredicted RBP4.17□□□□□ -1.74
RNU6-1258P-201ENST00000516911 ADGRD1Q6QNK2 874 aa4.17□□□□□ -1.74
RNU6-1258P-201ENST00000516911 RNF25Q96BH1 459 aaPredicted RBP4.17□□□□□ -1.74
RNU6-1258P-201ENST00000516911 KCTD12Q96CX2 325 aaKnown RBP4.17□□□□□ -1.74
RNU6-1258P-201ENST00000516911 GOLGA8CPA6NN73 597 aa4.16□□□□□ -1.74
RNU6-1258P-201ENST00000516911 SLC34A2O95436 690 aa4.16□□□□□ -1.74
RNU6-1258P-201ENST00000516911 PPP4R3BQ5MIZ7 849 aa4.16□□□□□ -1.74
RNU6-1258P-201ENST00000516911 FBXO22Q8NEZ5 403 aa4.16□□□□□ -1.74
RNU6-1258P-201ENST00000516911 TK2O00142 265 aa4.15□□□□□ -1.75
RNU6-1258P-201ENST00000516911 MFRPQ9BY79 579 aa4.15□□□□□ -1.75
RNU6-1258P-201ENST00000516911 KIF3CO14782 793 aa4.14□□□□□ -1.75
RNU6-1258P-201ENST00000516911 PTPN5P54829 565 aa4.14□□□□□ -1.75
RNU6-1258P-201ENST00000516911 PSEN2P49810 448 aa4.12□□□□□ -1.75
RNU6-1258P-201ENST00000516911 IRX2Q9BZI1 471 aaPredicted RBP4.12□□□□□ -1.75
RNU6-1258P-201ENST00000516911 POTEEQ6S8J3 1075 aa4.11□□□□□ -1.75
RNU6-1258P-201ENST00000516911 PLPP6Q8IY26 295 aa4.11□□□□□ -1.75
RNU6-1258P-201ENST00000516911 KCNK17Q96T54 332 aa4.11□□□□□ -1.75
RNU6-1258P-201ENST00000516911 RGS20O76081 388 aa4.1□□□□□ -1.75
RNU6-1258P-201ENST00000516911 DMRTA1Q5VZB9 504 aa4.1□□□□□ -1.75
RNU6-1258P-201ENST00000516911 PTCD2Q8WV60 388 aaKnown RBP4.1□□□□□ -1.75
RNU6-1258P-201ENST00000516911 HRO43593 1189 aa4.08□□□□□ -1.76
RNU6-1258P-201ENST00000516911 PTPREP23469 700 aa4.08□□□□□ -1.76
RNU6-1258P-201ENST00000516911 FOXK1P85037 733 aa4.08□□□□□ -1.76
RNU6-1258P-201ENST00000516911 MRPL50Q8N5N7 158 aaKnown RBP4.08□□□□□ -1.76
RNU6-1258P-201ENST00000516911 ZNF454Q8N9F8 522 aa4.08□□□□□ -1.76
RNU6-1258P-201ENST00000516911 WNT2BQ93097 391 aa4.07□□□□□ -1.76
RNU6-1258P-201ENST00000516911 NBPF3Q9H094 633 aa4.07□□□□□ -1.76
RNU6-1258P-201ENST00000516911 GPHNQ9NQX3 736 aaPredicted RBP4.07□□□□□ -1.76
RNU6-1258P-201ENST00000516911 PPP1R37O75864 691 aa4.06□□□□□ -1.76
RNU6-1258P-201ENST00000516911 UPF1Q92900 1129 aaKnown RBP eCLIP4.06□□□□□ -1.76
RNU6-1258P-201ENST00000516911 RYDENQ9NUL5 291 aaKnown RBP4.06□□□□□ -1.76
RNU6-1258P-201ENST00000516911 VPS9D1Q9Y2B5 631 aa4.06□□□□□ -1.76
RNU6-1258P-201ENST00000516911 RGL2O15211 777 aa4.05□□□□□ -1.76
RNU6-1258P-201ENST00000516911 DSG2Q14126 1118 aa4.04□□□□□ -1.76
RNU6-1258P-201ENST00000516911 THSD4Q6ZMP0 1018 aa4.04□□□□□ -1.76
RNU6-1258P-201ENST00000516911 KDM4FA0A1W2PPD8 638 aa4.03□□□□□ -1.76
RNU6-1258P-201ENST00000516911 IFFO2Q5TF58 517 aa4.03□□□□□ -1.76
RNU6-1258P-201ENST00000516911 Q6ZNB5 142 aa4.03□□□□□ -1.76
RNU6-1258P-201ENST00000516911 SLC4A5Q9BY07 1137 aa4.03□□□□□ -1.76
RNU6-1258P-201ENST00000516911 BCL2L12Q9HB09 334 aa4.03□□□□□ -1.76
RNU6-1258P-201ENST00000516911 A0A0G2JS52 829 aa4.02□□□□□ -1.77
RNU6-1258P-201ENST00000516911 PDE4AP27815 886 aa4.02□□□□□ -1.77
RNU6-1258P-201ENST00000516911 ANKK1Q8NFD2 765 aa4.02□□□□□ -1.77
RNU6-1258P-201ENST00000516911 CHGAP10645 457 aaKnown RBP4.01□□□□□ -1.77
RNU6-1258P-201ENST00000516911 MAP3K9P80192 1104 aa4.01□□□□□ -1.77
RNU6-1258P-201ENST00000516911 OXER1Q8TDS5 423 aa4.01□□□□□ -1.77
RNU6-1258P-201ENST00000516911 ZDHHC16Q969W1 377 aa4.01□□□□□ -1.77
RNU6-1258P-201ENST00000516911 PKD2Q13563 968 aa4□□□□□ -1.77
RNU6-1258P-201ENST00000516911 PPP1R15BQ5SWA1 713 aa4□□□□□ -1.77
RNU6-1258P-201ENST00000516911 BHMG1C9JSJ3 638 aaPredicted RBP3.99□□□□□ -1.77
RNU6-1258P-201ENST00000516911 EVI5O60447 810 aa3.99□□□□□ -1.77
RNU6-1258P-201ENST00000516911 FOSBP53539 338 aa3.99□□□□□ -1.77
RNU6-1258P-201ENST00000516911 NYAP1Q6ZVC0 841 aa3.99□□□□□ -1.77
RNU6-1258P-201ENST00000516911 ZBED2Q9BTP6 218 aa3.99□□□□□ -1.77
RNU6-1258P-201ENST00000516911 KCNC4Q03721 635 aa3.98□□□□□ -1.77
RNU6-1258P-201ENST00000516911 LAPTM4AQ15012 233 aa3.98□□□□□ -1.77
RNU6-1258P-201ENST00000516911 HS6ST3Q8IZP7 471 aa3.98□□□□□ -1.77
RNU6-1258P-201ENST00000516911 JPH4Q96JJ6 628 aa3.98□□□□□ -1.77
RNU6-1258P-201ENST00000516911 RABGEF1Q9UJ41 708 aa3.98□□□□□ -1.77
RNU6-1258P-201ENST00000516911 LAPTM4BQ86VI4 370 aa3.96□□□□□ -1.78
RNU6-1258P-201ENST00000516911 DDX27Q96GQ7 796 aaKnown RBP3.96□□□□□ -1.78
RNU6-1258P-201ENST00000516911 LARP6Q9BRS8 491 aaKnown RBP3.96□□□□□ -1.78
RNU6-1258P-201ENST00000516911 ADAM33Q9BZ11 813 aa3.96□□□□□ -1.78
RNU6-1258P-201ENST00000516911 PPP1R3GB7ZBB8 358 aa3.95□□□□□ -1.78
RNU6-1258P-201ENST00000516911 FBXW7Q969H0 707 aa3.95□□□□□ -1.78
RNU6-1258P-201ENST00000516911 ANO8Q9HCE9 1232 aaPredicted RBP3.95□□□□□ -1.78
RNU6-1258P-201ENST00000516911 SOWAHBA6NEL2 793 aa3.94□□□□□ -1.78
RNU6-1258P-201ENST00000516911 GFRA3O60609 400 aa3.94□□□□□ -1.78
RNU6-1258P-201ENST00000516911 ITGBL1O95965 494 aaPredicted RBP3.94□□□□□ -1.78
RNU6-1258P-201ENST00000516911 BCAMP50895 628 aa3.94□□□□□ -1.78
RNU6-1258P-201ENST00000516911 TYW1BQ6NUM6 668 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms