RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ZBTB22O15209 634 aa4.4□□□□□ -1.71
RNU6-539P-201ENST00000516665 BOLA1Q9Y3E2 137 aa4.39□□□□□ -1.71
RNU6-539P-201ENST00000516665 MKRN3Q13064 507 aaKnown RBP4.38□□□□□ -1.71
RNU6-539P-201ENST00000516665 G3V3G9 751 aa4.35□□□□□ -1.71
RNU6-539P-201ENST00000516665 INSM1Q01101 510 aaPredicted RBP4.35□□□□□ -1.71
RNU6-539P-201ENST00000516665 DCAF8Q5TAQ9 597 aa4.35□□□□□ -1.71
RNU6-539P-201ENST00000516665 GOLGA2Q08379 1002 aa4.33□□□□□ -1.72
RNU6-539P-201ENST00000516665 TMEM92Q6UXU6 159 aa4.33□□□□□ -1.72
RNU6-539P-201ENST00000516665 ILDR1Q86SU0 546 aaPredicted RBP4.33□□□□□ -1.72
RNU6-539P-201ENST00000516665 PSMG3-AS1Q96PY0 264 aa4.33□□□□□ -1.72
RNU6-539P-201ENST00000516665 PCDHB8Q9UN66 801 aa4.33□□□□□ -1.72
RNU6-539P-201ENST00000516665 TK2O00142 265 aa4.32□□□□□ -1.72
RNU6-539P-201ENST00000516665 DMRTA1Q5VZB9 504 aa4.32□□□□□ -1.72
RNU6-539P-201ENST00000516665 ARHGAP33O14559 1287 aa4.31□□□□□ -1.72
RNU6-539P-201ENST00000516665 WIPF1O43516 503 aa4.31□□□□□ -1.72
RNU6-539P-201ENST00000516665 LCE3BQ5TA77 95 aa4.3□□□□□ -1.72
RNU6-539P-201ENST00000516665 THSD4Q6ZMP0 1018 aa4.3□□□□□ -1.72
RNU6-539P-201ENST00000516665 KRTAP4-8A0A0G2JLE6 195 aa4.29□□□□□ -1.72
RNU6-539P-201ENST00000516665 WFS1O76024 890 aa4.29□□□□□ -1.72
RNU6-539P-201ENST00000516665 ITGBL1O95965 494 aaPredicted RBP4.29□□□□□ -1.72
RNU6-539P-201ENST00000516665 STAC3Q96MF2 364 aa4.29□□□□□ -1.72
RNU6-539P-201ENST00000516665 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
RNU6-539P-201ENST00000516665 KRTAP9-4Q9BYQ2 154 aa4.28□□□□□ -1.72
RNU6-539P-201ENST00000516665 LHX6Q9UPM6 363 aa4.28□□□□□ -1.72
RNU6-539P-201ENST00000516665 NUDT7P0C024 238 aa4.27□□□□□ -1.73
RNU6-539P-201ENST00000516665 PSEN2P49810 448 aa4.27□□□□□ -1.73
RNU6-539P-201ENST00000516665 EHMT2Q96KQ7 1210 aa4.27□□□□□ -1.73
RNU6-539P-201ENST00000516665 SPDYE4A6NLX3 237 aa4.24□□□□□ -1.73
RNU6-539P-201ENST00000516665 NUBP1P53384 320 aa4.23□□□□□ -1.73
RNU6-539P-201ENST00000516665 LCE2CQ5TA81 110 aa4.23□□□□□ -1.73
RNU6-539P-201ENST00000516665 PRKD2Q9BZL6 878 aa4.23□□□□□ -1.73
RNU6-539P-201ENST00000516665 PDZRN3Q9UPQ7 1066 aa4.23□□□□□ -1.73
RNU6-539P-201ENST00000516665 PYGBP11216 843 aa4.22□□□□□ -1.73
RNU6-539P-201ENST00000516665 SLC4A1APQ9BWU0 796 aaKnown RBP4.22□□□□□ -1.73
RNU6-539P-201ENST00000516665 NFX1Q12986 1120 aaKnown RBP4.21□□□□□ -1.74
RNU6-539P-201ENST00000516665 MYT1Q01538 1121 aa4.19□□□□□ -1.74
RNU6-539P-201ENST00000516665 KCTD17Q8N5Z5 321 aa4.19□□□□□ -1.74
RNU6-539P-201ENST00000516665 KRTAP17-1Q9BYP8 105 aa4.19□□□□□ -1.74
RNU6-539P-201ENST00000516665 WNT2BQ93097 391 aa4.18□□□□□ -1.74
RNU6-539P-201ENST00000516665 FAM212AQ96EL1 285 aa4.18□□□□□ -1.74
RNU6-539P-201ENST00000516665 PLEKHG5O94827 1062 aa4.17□□□□□ -1.74
RNU6-539P-201ENST00000516665 ANO8Q9HCE9 1232 aaPredicted RBP4.17□□□□□ -1.74
RNU6-539P-201ENST00000516665 FAM181BA6NEQ2 426 aa4.16□□□□□ -1.74
RNU6-539P-201ENST00000516665 MIER1Q8N108 512 aa4.16□□□□□ -1.74
RNU6-539P-201ENST00000516665 KRTAP4-12Q9BQ66 201 aa4.16□□□□□ -1.74
RNU6-539P-201ENST00000516665 KRTAP4-7Q9BYR0 210 aa4.16□□□□□ -1.74
RNU6-539P-201ENST00000516665 BTBD11A6QL63 1104 aa4.14□□□□□ -1.75
RNU6-539P-201ENST00000516665 KCNC4Q03721 635 aa4.14□□□□□ -1.75
RNU6-539P-201ENST00000516665 VPS9D1Q9Y2B5 631 aa4.14□□□□□ -1.75
RNU6-539P-201ENST00000516665 LORP23490 312 aaPredicted RBP4.13□□□□□ -1.75
RNU6-539P-201ENST00000516665 MICALL2Q8IY33 904 aa4.13□□□□□ -1.75
RNU6-539P-201ENST00000516665 GOLGA8CPA6NN73 597 aa4.11□□□□□ -1.75
RNU6-539P-201ENST00000516665 V9GY48 417 aaPredicted RBP4.11□□□□□ -1.75
RNU6-539P-201ENST00000516665 PKDCCQ504Y2 493 aa4.1□□□□□ -1.75
RNU6-539P-201ENST00000516665 PSEN1P49768 467 aa4.09□□□□□ -1.75
RNU6-539P-201ENST00000516665 BHMG1C9JSJ3 638 aaPredicted RBP4.08□□□□□ -1.76
RNU6-539P-201ENST00000516665 ST8SIA5O15466 376 aa4.08□□□□□ -1.76
RNU6-539P-201ENST00000516665 KCNK17Q96T54 332 aa4.08□□□□□ -1.76
RNU6-539P-201ENST00000516665 CABP2Q9NPB3 220 aa4.08□□□□□ -1.76
RNU6-539P-201ENST00000516665 PCDHGA4Q9Y5G9 962 aa4.07□□□□□ -1.76
RNU6-539P-201ENST00000516665 GSK3AP49840 483 aa4.06□□□□□ -1.76
RNU6-539P-201ENST00000516665 ZSCAN1Q8NBB4 408 aa4.06□□□□□ -1.76
RNU6-539P-201ENST00000516665 PSDA5PKW4 1024 aaPredicted RBP4.05□□□□□ -1.76
RNU6-539P-201ENST00000516665 DGAT1O75907 488 aa4.05□□□□□ -1.76
RNU6-539P-201ENST00000516665 TRIM67Q6ZTA4 783 aa4.05□□□□□ -1.76
RNU6-539P-201ENST00000516665 ZNF467Q7Z7K2 595 aaPredicted RBP4.05□□□□□ -1.76
RNU6-539P-201ENST00000516665 MRPL50Q8N5N7 158 aaKnown RBP4.04□□□□□ -1.76
RNU6-539P-201ENST00000516665 AAASQ9NRG9 546 aa4.03□□□□□ -1.76
RNU6-539P-201ENST00000516665 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
RNU6-539P-201ENST00000516665 BCAMP50895 628 aa4.01□□□□□ -1.77
RNU6-539P-201ENST00000516665 GMPR2Q9P2T1 348 aaKnown RBP4□□□□□ -1.77
RNU6-539P-201ENST00000516665 DACH1Q9UI36 760 aa4□□□□□ -1.77
RNU6-539P-201ENST00000516665 C11orf95C9JLR9 678 aaPredicted RBP3.99□□□□□ -1.77
RNU6-539P-201ENST00000516665 TERTO14746 1132 aaKnown RBP3.99□□□□□ -1.77
RNU6-539P-201ENST00000516665 KCNMA1Q12791 1236 aa3.99□□□□□ -1.77
RNU6-539P-201ENST00000516665 LCE1DQ5T752 114 aa3.99□□□□□ -1.77
RNU6-539P-201ENST00000516665 PPP1R18Q6NYC8 613 aa3.99□□□□□ -1.77
RNU6-539P-201ENST00000516665 PLCD3Q8N3E9 789 aa3.99□□□□□ -1.77
RNU6-539P-201ENST00000516665 FAM187AA6NFU0 413 aa3.98□□□□□ -1.77
RNU6-539P-201ENST00000516665 PPP4R3BQ5MIZ7 849 aa3.98□□□□□ -1.77
RNU6-539P-201ENST00000516665 WBP1LQ9NX94 342 aa3.98□□□□□ -1.77
RNU6-539P-201ENST00000516665 KCNH8Q96L42 1107 aa3.97□□□□□ -1.77
RNU6-539P-201ENST00000516665 SLC4A5Q9BY07 1137 aa3.97□□□□□ -1.77
RNU6-539P-201ENST00000516665 KDM4FA0A1W2PPD8 638 aa3.96□□□□□ -1.78
RNU6-539P-201ENST00000516665 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.78
RNU6-539P-201ENST00000516665 PROM2Q8N271 834 aa3.96□□□□□ -1.78
RNU6-539P-201ENST00000516665 KRTAP4-9Q9BYQ8 210 aa3.96□□□□□ -1.78
RNU6-539P-201ENST00000516665 ZBTB47Q9UFB7 747 aaPredicted RBP3.96□□□□□ -1.78
RNU6-539P-201ENST00000516665 SLC34A2O95436 690 aa3.95□□□□□ -1.78
RNU6-539P-201ENST00000516665 GMPRP36959 345 aa3.95□□□□□ -1.78
RNU6-539P-201ENST00000516665 NYAP1Q6ZVC0 841 aa3.95□□□□□ -1.78
RNU6-539P-201ENST00000516665 TMEM151AQ8N4L1 468 aa3.95□□□□□ -1.78
RNU6-539P-201ENST00000516665 ANKK1Q8NFD2 765 aa3.95□□□□□ -1.78
RNU6-539P-201ENST00000516665 GDF11O95390 407 aa3.94□□□□□ -1.78
RNU6-539P-201ENST00000516665 PDAP1Q13442 181 aaKnown RBP3.94□□□□□ -1.78
RNU6-539P-201ENST00000516665 KRTAP19-1Q8IUB9 90 aa3.94□□□□□ -1.78
RNU6-539P-201ENST00000516665 GPAT2Q6NUI2 795 aa3.93□□□□□ -1.78
RNU6-539P-201ENST00000516665 Q8N3U1 123 aa3.93□□□□□ -1.78
RNU6-539P-201ENST00000516665 SOWAHBA6NEL2 793 aa3.92□□□□□ -1.78
RNU6-539P-201ENST00000516665 NBPF3Q9H094 633 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms