RNA–Protein interactions for RNA: ENST00000516564.1

RNU6-358P-201, Transcript of RNA, U6 small nuclear 358, pseudogene, humanhuman

BASIC

Gene RNU6-358P, Length 75 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-358P-201ENST00000516564 POTEBQ6S5H4 581 aa10.33□□□□□ -0.76
RNU6-358P-201ENST00000516564 PPP1R37O75864 691 aa10.32□□□□□ -0.76
RNU6-358P-201ENST00000516564 CHGAP10645 457 aaKnown RBP10.32□□□□□ -0.76
RNU6-358P-201ENST00000516564 HOXB1P14653 301 aaPredicted RBP10.32□□□□□ -0.76
RNU6-358P-201ENST00000516564 HS6ST3Q8IZP7 471 aa10.32□□□□□ -0.76
RNU6-358P-201ENST00000516564 HS3ST6Q96QI5 342 aa10.31□□□□□ -0.76
RNU6-358P-201ENST00000516564 RIMBP2O15034 1052 aa10.3□□□□□ -0.76
RNU6-358P-201ENST00000516564 C2orf72A6NCS6 295 aa10.27□□□□□ -0.77
RNU6-358P-201ENST00000516564 KIF3CO14782 793 aa10.25□□□□□ -0.77
RNU6-358P-201ENST00000516564 ERBB3P21860 1342 aa10.25□□□□□ -0.77
RNU6-358P-201ENST00000516564 GPR153Q6NV75 609 aa10.24□□□□□ -0.77
RNU6-358P-201ENST00000516564 ZSWIM6Q9HCJ5 1215 aa10.24□□□□□ -0.77
RNU6-358P-201ENST00000516564 NKX1-1Q15270 411 aaPredicted RBP10.22□□□□□ -0.77
RNU6-358P-201ENST00000516564 ARSIQ5FYB1 569 aa10.22□□□□□ -0.77
RNU6-358P-201ENST00000516564 TMC2Q8TDI7 906 aa10.21□□□□□ -0.77
RNU6-358P-201ENST00000516564 KRTAP3-3Q9BYR6 98 aa10.21□□□□□ -0.77
RNU6-358P-201ENST00000516564 KRTAP3-2Q9BYR7 98 aa10.21□□□□□ -0.77
RNU6-358P-201ENST00000516564 SPNS2Q8IVW8 549 aa10.2□□□□□ -0.78
RNU6-358P-201ENST00000516564 KHSRPQ92945 711 aaKnown RBP eCLIP10.2□□□□□ -0.78
RNU6-358P-201ENST00000516564 VARS2Q5ST30 1063 aaKnown RBP10.19□□□□□ -0.78
RNU6-358P-201ENST00000516564 DNAJC5Q9H3Z4 198 aa10.17□□□□□ -0.78
RNU6-358P-201ENST00000516564 DCAF8L2P0C7V8 631 aa10.15□□□□□ -0.78
RNU6-358P-201ENST00000516564 MMRN1Q13201 1228 aa10.15□□□□□ -0.78
RNU6-358P-201ENST00000516564 NUDT7P0C024 238 aa10.11□□□□□ -0.79
RNU6-358P-201ENST00000516564 PCDHGA4Q9Y5G9 962 aa10.11□□□□□ -0.79
RNU6-358P-201ENST00000516564 ZNF316A6NFI3 1004 aaPredicted RBP10.1□□□□□ -0.79
RNU6-358P-201ENST00000516564 SLC34A2O95436 690 aa10.1□□□□□ -0.79
RNU6-358P-201ENST00000516564 ZNF687Q8N1G0 1237 aa10.1□□□□□ -0.79
RNU6-358P-201ENST00000516564 GPHNQ9NQX3 736 aaPredicted RBP10.09□□□□□ -0.79
RNU6-358P-201ENST00000516564 RYDENQ9NUL5 291 aaKnown RBP10.09□□□□□ -0.79
RNU6-358P-201ENST00000516564 FOXK1P85037 733 aa10.08□□□□□ -0.8
RNU6-358P-201ENST00000516564 PLPP6Q8IY26 295 aa10.08□□□□□ -0.8
RNU6-358P-201ENST00000516564 GTPBP6O43824 516 aaPredicted RBP10.07□□□□□ -0.8
RNU6-358P-201ENST00000516564 DSG2Q14126 1118 aa10.07□□□□□ -0.8
RNU6-358P-201ENST00000516564 LHX6Q9UPM6 363 aa10.05□□□□□ -0.8
RNU6-358P-201ENST00000516564 PTCD2Q8WV60 388 aaKnown RBP10.02□□□□□ -0.81
RNU6-358P-201ENST00000516564 CRISPLD2Q9H0B8 497 aa10□□□□□ -0.81
RNU6-358P-201ENST00000516564 KDM4FA0A1W2PPD8 638 aa9.98□□□□□ -0.81
RNU6-358P-201ENST00000516564 ANKRD13DQ6ZTN6 518 aa9.98□□□□□ -0.81
RNU6-358P-201ENST00000516564 NCKAP5LQ9HCH0 1330 aa9.98□□□□□ -0.81
RNU6-358P-201ENST00000516564 PDE4AP27815 886 aa9.96□□□□□ -0.82
RNU6-358P-201ENST00000516564 PPP1R15BQ5SWA1 713 aa9.96□□□□□ -0.82
RNU6-358P-201ENST00000516564 POTEEQ6S8J3 1075 aa9.96□□□□□ -0.82
RNU6-358P-201ENST00000516564 AXIN2Q9Y2T1 843 aa9.96□□□□□ -0.82
RNU6-358P-201ENST00000516564 TBC1D12O60347 775 aa9.95□□□□□ -0.82
RNU6-358P-201ENST00000516564 UPF1Q92900 1129 aaKnown RBP eCLIP9.95□□□□□ -0.82
RNU6-358P-201ENST00000516564 LSM11P83369 360 aaKnown RBP eCLIP9.94□□□□□ -0.82
RNU6-358P-201ENST00000516564 OXER1Q8TDS5 423 aa9.93□□□□□ -0.82
RNU6-358P-201ENST00000516564 LARP6Q9BRS8 491 aaKnown RBP9.93□□□□□ -0.82
RNU6-358P-201ENST00000516564 PBX2P40425 430 aa9.92□□□□□ -0.82
RNU6-358P-201ENST00000516564 MYT1LQ9UL68 1186 aa9.92□□□□□ -0.82
RNU6-358P-201ENST00000516564 PSDA5PKW4 1024 aaPredicted RBP9.9□□□□□ -0.82
RNU6-358P-201ENST00000516564 CADPS2Q86UW7 1296 aa9.9□□□□□ -0.82
RNU6-358P-201ENST00000516564 RNF166Q96A37 237 aaPredicted RBP9.9□□□□□ -0.82
RNU6-358P-201ENST00000516564 DDX27Q96GQ7 796 aaKnown RBP9.89□□□□□ -0.83
RNU6-358P-201ENST00000516564 RTN4Q9NQC3 1192 aaKnown RBP9.89□□□□□ -0.83
RNU6-358P-201ENST00000516564 AMER1Q5JTC6 1135 aaPredicted RBP9.88□□□□□ -0.83
RNU6-358P-201ENST00000516564 ARHGAP33O14559 1287 aa9.87□□□□□ -0.83
RNU6-358P-201ENST00000516564 BBXQ8WY36 941 aaPredicted RBP9.87□□□□□ -0.83
RNU6-358P-201ENST00000516564 PPP4R3BQ5MIZ7 849 aa9.86□□□□□ -0.83
RNU6-358P-201ENST00000516564 PTGER2P43116 358 aa9.85□□□□□ -0.83
RNU6-358P-201ENST00000516564 PSEN2P49810 448 aa9.85□□□□□ -0.83
RNU6-358P-201ENST00000516564 MFSD10Q14728 455 aa9.85□□□□□ -0.83
RNU6-358P-201ENST00000516564 DMRTA1Q5VZB9 504 aa9.83□□□□□ -0.84
RNU6-358P-201ENST00000516564 ZNF454Q8N9F8 522 aa9.82□□□□□ -0.84
RNU6-358P-201ENST00000516564 EVI5O60447 810 aa9.81□□□□□ -0.84
RNU6-358P-201ENST00000516564 ADGRD1Q6QNK2 874 aa9.81□□□□□ -0.84
RNU6-358P-201ENST00000516564 EMILIN3Q9NT22 766 aa9.81□□□□□ -0.84
RNU6-358P-201ENST00000516564 MAP3K9P80192 1104 aa9.8□□□□□ -0.84
RNU6-358P-201ENST00000516564 KCNK17Q96T54 332 aa9.79□□□□□ -0.84
RNU6-358P-201ENST00000516564 ANO8Q9HCE9 1232 aaPredicted RBP9.79□□□□□ -0.84
RNU6-358P-201ENST00000516564 FOSBP53539 338 aa9.77□□□□□ -0.85
RNU6-358P-201ENST00000516564 SPRYD3Q8NCJ5 442 aa9.77□□□□□ -0.85
RNU6-358P-201ENST00000516564 TK2O00142 265 aa9.76□□□□□ -0.85
RNU6-358P-201ENST00000516564 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.75□□□□□ -0.85
RNU6-358P-201ENST00000516564 KCNH8Q96L42 1107 aa9.74□□□□□ -0.85
RNU6-358P-201ENST00000516564 BCL2L12Q9HB09 334 aa9.74□□□□□ -0.85
RNU6-358P-201ENST00000516564 HRO43593 1189 aa9.73□□□□□ -0.85
RNU6-358P-201ENST00000516564 JPH4Q96JJ6 628 aa9.73□□□□□ -0.85
RNU6-358P-201ENST00000516564 CFAP44Q96MT7 982 aa9.72□□□□□ -0.85
RNU6-358P-201ENST00000516564 CAMK2BQ13554 666 aa9.71□□□□□ -0.86
RNU6-358P-201ENST00000516564 PAXIP1Q6ZW49 1069 aaPredicted RBP9.71□□□□□ -0.86
RNU6-358P-201ENST00000516564 ZDHHC16Q969W1 377 aa9.71□□□□□ -0.86
RNU6-358P-201ENST00000516564 ADAM33Q9BZ11 813 aa9.71□□□□□ -0.86
RNU6-358P-201ENST00000516564 PTPREP23469 700 aa9.7□□□□□ -0.86
RNU6-358P-201ENST00000516564 VPS9D1Q9Y2B5 631 aa9.7□□□□□ -0.86
RNU6-358P-201ENST00000516564 DPYSL4O14531 572 aa9.69□□□□□ -0.86
RNU6-358P-201ENST00000516564 STAC3Q96MF2 364 aa9.68□□□□□ -0.86
RNU6-358P-201ENST00000516564 PCDHGA10Q9Y5H3 936 aa9.68□□□□□ -0.86
RNU6-358P-201ENST00000516564 KCTD12Q96CX2 325 aaKnown RBP9.65□□□□□ -0.86
RNU6-358P-201ENST00000516564 ZBED2Q9BTP6 218 aa9.65□□□□□ -0.86
RNU6-358P-201ENST00000516564 SLC4A5Q9BY07 1137 aa9.65□□□□□ -0.86
RNU6-358P-201ENST00000516564 HCSTQ9UBK5 93 aa9.65□□□□□ -0.86
RNU6-358P-201ENST00000516564 PHF14O94880 888 aa9.63□□□□□ -0.87
RNU6-358P-201ENST00000516564 TYW1BQ6NUM6 668 aa9.63□□□□□ -0.87
RNU6-358P-201ENST00000516564 BHMG1C9JSJ3 638 aaPredicted RBP9.61□□□□□ -0.87
RNU6-358P-201ENST00000516564 COL9A1P20849 921 aa9.6□□□□□ -0.87
RNU6-358P-201ENST00000516564 DDX12PQ92771 950 aa9.6□□□□□ -0.87
RNU6-358P-201ENST00000516564 FBXW7Q969H0 707 aa9.6□□□□□ -0.87
RNU6-358P-201ENST00000516564 PPP1R3GB7ZBB8 358 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms