RNA–Protein interactions for RNA: ENST00000516328.1

RNU6-1338P-201, Transcript of RNA, U6 small nuclear 1338, pseudogene, humanhuman

BASIC

Gene RNU6-1338P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1338P-201ENST00000516328 ZSWIM6Q9HCJ5 1215 aa7.51□□□□□ -1.21
RNU6-1338P-201ENST00000516328 NLRP6P59044 892 aa7.5□□□□□ -1.21
RNU6-1338P-201ENST00000516328 VARS2Q5ST30 1063 aaKnown RBP7.5□□□□□ -1.21
RNU6-1338P-201ENST00000516328 BCL11BQ9C0K0 894 aaPredicted RBP7.5□□□□□ -1.21
RNU6-1338P-201ENST00000516328 STK24Q9Y6E0 443 aa7.5□□□□□ -1.21
RNU6-1338P-201ENST00000516328 GPR153Q6NV75 609 aa7.48□□□□□ -1.21
RNU6-1338P-201ENST00000516328 FBXO22Q8NEZ5 403 aa7.48□□□□□ -1.21
RNU6-1338P-201ENST00000516328 STK25O00506 426 aa7.45□□□□□ -1.22
RNU6-1338P-201ENST00000516328 ECM2O94769 699 aaPredicted RBP7.45□□□□□ -1.22
RNU6-1338P-201ENST00000516328 ZNF687Q8N1G0 1237 aa7.45□□□□□ -1.22
RNU6-1338P-201ENST00000516328 MFRPQ9BY79 579 aa7.45□□□□□ -1.22
RNU6-1338P-201ENST00000516328 ARSIQ5FYB1 569 aa7.44□□□□□ -1.22
RNU6-1338P-201ENST00000516328 KHSRPQ92945 711 aaKnown RBP eCLIP7.41□□□□□ -1.22
RNU6-1338P-201ENST00000516328 RNF166Q96A37 237 aaPredicted RBP7.41□□□□□ -1.22
RNU6-1338P-201ENST00000516328 C2orf72A6NCS6 295 aa7.39□□□□□ -1.23
RNU6-1338P-201ENST00000516328 ZNF316A6NFI3 1004 aaPredicted RBP7.39□□□□□ -1.23
RNU6-1338P-201ENST00000516328 KIF3CO14782 793 aa7.39□□□□□ -1.23
RNU6-1338P-201ENST00000516328 RGL2O15211 777 aa7.39□□□□□ -1.23
RNU6-1338P-201ENST00000516328 PKD2Q13563 968 aa7.39□□□□□ -1.23
RNU6-1338P-201ENST00000516328 MYT1LQ9UL68 1186 aa7.38□□□□□ -1.23
RNU6-1338P-201ENST00000516328 NUDT7P0C024 238 aa7.35□□□□□ -1.23
RNU6-1338P-201ENST00000516328 PTGER2P43116 358 aa7.35□□□□□ -1.23
RNU6-1338P-201ENST00000516328 ANKRD13DQ6ZTN6 518 aa7.34□□□□□ -1.23
RNU6-1338P-201ENST00000516328 TMC2Q8TDI7 906 aa7.34□□□□□ -1.23
RNU6-1338P-201ENST00000516328 SLC34A2O95436 690 aa7.32□□□□□ -1.24
RNU6-1338P-201ENST00000516328 LHX6Q9UPM6 363 aa7.32□□□□□ -1.24
RNU6-1338P-201ENST00000516328 PCDHGA4Q9Y5G9 962 aa7.32□□□□□ -1.24
RNU6-1338P-201ENST00000516328 PPP1R37O75864 691 aa7.31□□□□□ -1.24
RNU6-1338P-201ENST00000516328 LSM11P83369 360 aaKnown RBP eCLIP7.31□□□□□ -1.24
RNU6-1338P-201ENST00000516328 PBX2P40425 430 aa7.29□□□□□ -1.24
RNU6-1338P-201ENST00000516328 POTEEQ6S8J3 1075 aa7.27□□□□□ -1.25
RNU6-1338P-201ENST00000516328 AXIN2Q9Y2T1 843 aa7.27□□□□□ -1.25
RNU6-1338P-201ENST00000516328 PSDA5PKW4 1024 aaPredicted RBP7.23□□□□□ -1.25
RNU6-1338P-201ENST00000516328 FOXK1P85037 733 aa7.23□□□□□ -1.25
RNU6-1338P-201ENST00000516328 HS6ST3Q8IZP7 471 aa7.23□□□□□ -1.25
RNU6-1338P-201ENST00000516328 PTCD2Q8WV60 388 aaKnown RBP7.23□□□□□ -1.25
RNU6-1338P-201ENST00000516328 PLPP6Q8IY26 295 aa7.22□□□□□ -1.25
RNU6-1338P-201ENST00000516328 ARHGAP33O14559 1287 aa7.21□□□□□ -1.26
RNU6-1338P-201ENST00000516328 GPHNQ9NQX3 736 aaPredicted RBP7.21□□□□□ -1.26
RNU6-1338P-201ENST00000516328 KDM4FA0A1W2PPD8 638 aa7.2□□□□□ -1.26
RNU6-1338P-201ENST00000516328 CHGAP10645 457 aaKnown RBP7.19□□□□□ -1.26
RNU6-1338P-201ENST00000516328 DSG2Q14126 1118 aa7.19□□□□□ -1.26
RNU6-1338P-201ENST00000516328 ADGRD1Q6QNK2 874 aa7.19□□□□□ -1.26
RNU6-1338P-201ENST00000516328 TBC1D12O60347 775 aa7.18□□□□□ -1.26
RNU6-1338P-201ENST00000516328 PSEN2P49810 448 aa7.17□□□□□ -1.26
RNU6-1338P-201ENST00000516328 DMRTA1Q5VZB9 504 aa7.17□□□□□ -1.26
RNU6-1338P-201ENST00000516328 TK2O00142 265 aa7.16□□□□□ -1.26
RNU6-1338P-201ENST00000516328 PPP4R3BQ5MIZ7 849 aa7.16□□□□□ -1.26
RNU6-1338P-201ENST00000516328 HCSTQ9UBK5 93 aa7.15□□□□□ -1.26
RNU6-1338P-201ENST00000516328 HRO43593 1189 aa7.14□□□□□ -1.27
RNU6-1338P-201ENST00000516328 DNAJC5Q9H3Z4 198 aa7.14□□□□□ -1.27
RNU6-1338P-201ENST00000516328 NKX1-1Q15270 411 aaPredicted RBP7.13□□□□□ -1.27
RNU6-1338P-201ENST00000516328 PLA2G2EQ9NZK7 142 aa7.13□□□□□ -1.27
RNU6-1338P-201ENST00000516328 UPF1Q92900 1129 aaKnown RBP eCLIP7.12□□□□□ -1.27
RNU6-1338P-201ENST00000516328 RYDENQ9NUL5 291 aaKnown RBP7.12□□□□□ -1.27
RNU6-1338P-201ENST00000516328 OXER1Q8TDS5 423 aa7.11□□□□□ -1.27
RNU6-1338P-201ENST00000516328 CRISPLD2Q9H0B8 497 aa7.11□□□□□ -1.27
RNU6-1338P-201ENST00000516328 KCNH8Q96L42 1107 aa7.1□□□□□ -1.27
RNU6-1338P-201ENST00000516328 STAC3Q96MF2 364 aa7.1□□□□□ -1.27
RNU6-1338P-201ENST00000516328 KCNK17Q96T54 332 aa7.1□□□□□ -1.27
RNU6-1338P-201ENST00000516328 PPP1R15BQ5SWA1 713 aa7.09□□□□□ -1.27
RNU6-1338P-201ENST00000516328 KCTD12Q96CX2 325 aaKnown RBP7.09□□□□□ -1.27
RNU6-1338P-201ENST00000516328 ZNF454Q8N9F8 522 aa7.08□□□□□ -1.28
RNU6-1338P-201ENST00000516328 PDE4AP27815 886 aa7.07□□□□□ -1.28
RNU6-1338P-201ENST00000516328 VPS9D1Q9Y2B5 631 aa7.06□□□□□ -1.28
RNU6-1338P-201ENST00000516328 NCKAP5LQ9HCH0 1330 aa7.05□□□□□ -1.28
RNU6-1338P-201ENST00000516328 BCL2L12Q9HB09 334 aa7.05□□□□□ -1.28
RNU6-1338P-201ENST00000516328 FOSBP53539 338 aa7.04□□□□□ -1.28
RNU6-1338P-201ENST00000516328 PTPREP23469 700 aa7.03□□□□□ -1.28
RNU6-1338P-201ENST00000516328 SLC4A5Q9BY07 1137 aa7.03□□□□□ -1.28
RNU6-1338P-201ENST00000516328 GTPBP6O43824 516 aaPredicted RBP7.02□□□□□ -1.29
RNU6-1338P-201ENST00000516328 EVI5O60447 810 aa7.02□□□□□ -1.29
RNU6-1338P-201ENST00000516328 PTPN5P54829 565 aa7.02□□□□□ -1.29
RNU6-1338P-201ENST00000516328 ANO8Q9HCE9 1232 aaPredicted RBP7.02□□□□□ -1.29
RNU6-1338P-201ENST00000516328 DDX27Q96GQ7 796 aaKnown RBP7.01□□□□□ -1.29
RNU6-1338P-201ENST00000516328 JPH4Q96JJ6 628 aa7.01□□□□□ -1.29
RNU6-1338P-201ENST00000516328 LARP6Q9BRS8 491 aaKnown RBP7.01□□□□□ -1.29
RNU6-1338P-201ENST00000516328 BHMG1C9JSJ3 638 aaPredicted RBP7□□□□□ -1.29
RNU6-1338P-201ENST00000516328 ZDHHC16Q969W1 377 aa7□□□□□ -1.29
RNU6-1338P-201ENST00000516328 ZBED2Q9BTP6 218 aa7□□□□□ -1.29
RNU6-1338P-201ENST00000516328 MAP3K9P80192 1104 aa6.99□□□□□ -1.29
RNU6-1338P-201ENST00000516328 ADAM33Q9BZ11 813 aa6.99□□□□□ -1.29
RNU6-1338P-201ENST00000516328 GOLGA8CPA6NN73 597 aa6.98□□□□□ -1.29
RNU6-1338P-201ENST00000516328 MFSD10Q14728 455 aa6.98□□□□□ -1.29
RNU6-1338P-201ENST00000516328 THSD4Q6ZMP0 1018 aa6.98□□□□□ -1.29
RNU6-1338P-201ENST00000516328 MRPL50Q8N5N7 158 aaKnown RBP6.97□□□□□ -1.29
RNU6-1338P-201ENST00000516328 WNT2BQ93097 391 aa6.97□□□□□ -1.29
RNU6-1338P-201ENST00000516328 DCAF8L2P0C7V8 631 aa6.96□□□□□ -1.3
RNU6-1338P-201ENST00000516328 NBPF3Q9H094 633 aa6.95□□□□□ -1.3
RNU6-1338P-201ENST00000516328 EMILIN3Q9NT22 766 aa6.95□□□□□ -1.3
RNU6-1338P-201ENST00000516328 PCDHGA10Q9Y5H3 936 aa6.94□□□□□ -1.3
RNU6-1338P-201ENST00000516328 PPP1R3GB7ZBB8 358 aa6.93□□□□□ -1.3
RNU6-1338P-201ENST00000516328 IFFO2Q5TF58 517 aa6.93□□□□□ -1.3
RNU6-1338P-201ENST00000516328 TYW1BQ6NUM6 668 aa6.91□□□□□ -1.3
RNU6-1338P-201ENST00000516328 CADPS2Q86UW7 1296 aa6.91□□□□□ -1.3
RNU6-1338P-201ENST00000516328 RABGEF1Q9UJ41 708 aa6.91□□□□□ -1.3
RNU6-1338P-201ENST00000516328 RGS20O76081 388 aa6.9□□□□□ -1.3
RNU6-1338P-201ENST00000516328 PHF14O94880 888 aa6.9□□□□□ -1.3
RNU6-1338P-201ENST00000516328 PROX2Q3B8N5 592 aa6.9□□□□□ -1.3
RNU6-1338P-201ENST00000516328 A0A0G2JS52 829 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms