RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 SETD5Q9C0A6 1442 aa11.4□□□□□ -0.58
SCARNA20.1-201ENST00000516009 PTPRKQ15262 1439 aa11.39□□□□□ -0.59
SCARNA20.1-201ENST00000516009 CROCC2H7BZ55 1655 aa11.39□□□□□ -0.59
SCARNA20.1-201ENST00000516009 KCNH8Q96L42 1107 aa11.38□□□□□ -0.59
SCARNA20.1-201ENST00000516009 RAB3GAP2Q9H2M9 1393 aa11.38□□□□□ -0.59
SCARNA20.1-201ENST00000516009 ZNF644Q9H582 1327 aaPredicted RBP11.37□□□□□ -0.59
SCARNA20.1-201ENST00000516009 GCC2Q8IWJ2 1684 aa11.37□□□□□ -0.59
SCARNA20.1-201ENST00000516009 ADGBQ8N7X0 1667 aa11.37□□□□□ -0.59
SCARNA20.1-201ENST00000516009 DAPK1P53355 1430 aa11.37□□□□□ -0.59
SCARNA20.1-201ENST00000516009 ASXL2Q76L83 1435 aa11.37□□□□□ -0.59
SCARNA20.1-201ENST00000516009 ARHGAP5Q13017 1502 aa11.37□□□□□ -0.59
SCARNA20.1-201ENST00000516009 ZNF777Q9ULD5 760 aaPredicted RBP11.37□□□□□ -0.59
SCARNA20.1-201ENST00000516009 ABCA9Q8IUA7 1624 aa11.36□□□□□ -0.59
SCARNA20.1-201ENST00000516009 SAMD9LQ8IVG5 1584 aa11.36□□□□□ -0.59
SCARNA20.1-201ENST00000516009 HFM1A2PYH4 1435 aa11.35□□□□□ -0.59
SCARNA20.1-201ENST00000516009 ABCC5O15440 1437 aa11.35□□□□□ -0.59
SCARNA20.1-201ENST00000516009 AKNAQ7Z591 1439 aa11.35□□□□□ -0.59
SCARNA20.1-201ENST00000516009 ARHGEF5Q12774 1597 aa11.34□□□□□ -0.59
SCARNA20.1-201ENST00000516009 CYB5RLQ6IPT4 315 aa11.34□□□□□ -0.59
SCARNA20.1-201ENST00000516009 ARAP3Q8WWN8 1544 aa11.34□□□□□ -0.59
SCARNA20.1-201ENST00000516009 PLCH2O75038 1416 aa11.34□□□□□ -0.59
SCARNA20.1-201ENST00000516009 PLEKHH2Q8IVE3 1493 aa11.33□□□□□ -0.6
SCARNA20.1-201ENST00000516009 NAIPQ13075 1403 aa11.33□□□□□ -0.6
SCARNA20.1-201ENST00000516009 ROCK1Q13464 1354 aa11.32□□□□□ -0.6
SCARNA20.1-201ENST00000516009 CHIC2Q9UKJ5 165 aa11.32□□□□□ -0.6
SCARNA20.1-201ENST00000516009 SHANK2Q9UPX8 1470 aa11.32□□□□□ -0.6
SCARNA20.1-201ENST00000516009 DHX57Q6P158 1386 aaKnown RBP11.31□□□□□ -0.6
SCARNA20.1-201ENST00000516009 MAPKBP1O60336 1514 aa11.31□□□□□ -0.6
SCARNA20.1-201ENST00000516009 SYCP2Q9BX26 1530 aa11.3□□□□□ -0.6
SCARNA20.1-201ENST00000516009 EFCAB2Q5VUJ9 269 aa11.3□□□□□ -0.6
SCARNA20.1-201ENST00000516009 RRP7BPQ9NSQ0 103 aa11.3□□□□□ -0.6
SCARNA20.1-201ENST00000516009 ADGRL2O95490 1459 aa11.3□□□□□ -0.6
SCARNA20.1-201ENST00000516009 CCDC141Q6ZP82 1450 aa11.3□□□□□ -0.6
SCARNA20.1-201ENST00000516009 KIAA1107Q9UPP5 1409 aa11.29□□□□□ -0.6
SCARNA20.1-201ENST00000516009 RSPH4AQ5TD94 716 aa11.29□□□□□ -0.6
SCARNA20.1-201ENST00000516009 MBD5Q9P267 1494 aa11.29□□□□□ -0.6
SCARNA20.1-201ENST00000516009 CLSPNQ9HAW4 1339 aa11.29□□□□□ -0.6
SCARNA20.1-201ENST00000516009 ABCC1P33527 1531 aa11.29□□□□□ -0.6
SCARNA20.1-201ENST00000516009 C9orf84Q5VXU9 1444 aa11.28□□□□□ -0.6
SCARNA20.1-201ENST00000516009 HNRNPMP52272 730 aaKnown RBP eCLIP11.28□□□□□ -0.6
SCARNA20.1-201ENST00000516009 ANKRD30AQ9BXX3 1397 aa11.28□□□□□ -0.6
SCARNA20.1-201ENST00000516009 TSPY4P0CV99 314 aa11.27□□□□□ -0.61
SCARNA20.1-201ENST00000516009 TSPY10P0CW01 314 aa11.27□□□□□ -0.61
SCARNA20.1-201ENST00000516009 CFAP74Q9C0B2 1584 aa11.27□□□□□ -0.61
SCARNA20.1-201ENST00000516009 MAST1Q9Y2H9 1570 aa11.27□□□□□ -0.61
SCARNA20.1-201ENST00000516009 NCOA1Q15788 1441 aa11.26□□□□□ -0.61
SCARNA20.1-201ENST00000516009 FANCAO15360 1455 aa11.26□□□□□ -0.61
SCARNA20.1-201ENST00000516009 KDM6BO15054 1643 aa11.26□□□□□ -0.61
SCARNA20.1-201ENST00000516009 ACIN1Q9UKV3 1341 aaKnown RBP11.26□□□□□ -0.61
SCARNA20.1-201ENST00000516009 CD109Q6YHK3 1445 aa11.24□□□□□ -0.61
SCARNA20.1-201ENST00000516009 ARHGEF12Q9NZN5 1544 aa11.24□□□□□ -0.61
SCARNA20.1-201ENST00000516009 GLI2P10070 1586 aa11.24□□□□□ -0.61
SCARNA20.1-201ENST00000516009 PLXNC1O60486 1568 aa11.23□□□□□ -0.61
SCARNA20.1-201ENST00000516009 MAP3K4Q9Y6R4 1608 aa11.23□□□□□ -0.61
SCARNA20.1-201ENST00000516009 ADGRL1O94910 1474 aa11.22□□□□□ -0.61
SCARNA20.1-201ENST00000516009 DIP2BQ9P265 1576 aa11.21□□□□□ -0.61
SCARNA20.1-201ENST00000516009 ANKRD50Q9ULJ7 1429 aa11.2□□□□□ -0.62
SCARNA20.1-201ENST00000516009 TRAPPC8Q9Y2L5 1435 aa11.2□□□□□ -0.62
SCARNA20.1-201ENST00000516009 KIF15Q9NS87 1388 aa11.2□□□□□ -0.62
SCARNA20.1-201ENST00000516009 TRIM52Q96A61 297 aa11.2□□□□□ -0.62
SCARNA20.1-201ENST00000516009 NEO1Q92859 1461 aa11.19□□□□□ -0.62
SCARNA20.1-201ENST00000516009 SCAPERQ9BY12 1400 aa11.18□□□□□ -0.62
SCARNA20.1-201ENST00000516009 ZFYVE16Q7Z3T8 1539 aa11.18□□□□□ -0.62
SCARNA20.1-201ENST00000516009 SPAG9O60271 1321 aaKnown RBP11.17□□□□□ -0.62
SCARNA20.1-201ENST00000516009 INO80Q9ULG1 1556 aaPredicted RBP11.17□□□□□ -0.62
SCARNA20.1-201ENST00000516009 DUOX2Q9NRD8 1548 aa11.17□□□□□ -0.62
SCARNA20.1-201ENST00000516009 RTEL1-TNFRSF6BF6WH68 1400 aa11.17□□□□□ -0.62
SCARNA20.1-201ENST00000516009 TSPOAP1O95153 1857 aa11.17□□□□□ -0.62
SCARNA20.1-201ENST00000516009 KIF13AQ9H1H9 1805 aa11.16□□□□□ -0.62
SCARNA20.1-201ENST00000516009 ATP7AQ04656 1500 aa11.16□□□□□ -0.62
SCARNA20.1-201ENST00000516009 ZNF518AQ6AHZ1 1483 aa11.15□□□□□ -0.62
SCARNA20.1-201ENST00000516009 AFAP1Q8N556 730 aa11.15□□□□□ -0.62
SCARNA20.1-201ENST00000516009 FAM69CQ0P6D2 419 aa11.14□□□□□ -0.63
SCARNA20.1-201ENST00000516009 MPHOSPH9Q99550 1183 aa11.14□□□□□ -0.63
SCARNA20.1-201ENST00000516009 UNC13BO14795 1591 aa11.14□□□□□ -0.63
SCARNA20.1-201ENST00000516009 KDM5DQ9BY66 1539 aa11.14□□□□□ -0.63
SCARNA20.1-201ENST00000516009 KIDINS220Q9ULH0 1771 aa11.13□□□□□ -0.63
SCARNA20.1-201ENST00000516009 PZPP20742 1482 aa11.13□□□□□ -0.63
SCARNA20.1-201ENST00000516009 KDM5CP41229 1560 aa11.13□□□□□ -0.63
SCARNA20.1-201ENST00000516009 POGZQ7Z3K3 1410 aa11.13□□□□□ -0.63
SCARNA20.1-201ENST00000516009 ERBINQ96RT1 1412 aa11.13□□□□□ -0.63
SCARNA20.1-201ENST00000516009 PPRC1Q5VV67 1664 aaKnown RBP11.13□□□□□ -0.63
SCARNA20.1-201ENST00000516009 DENND4BO75064 1496 aaPredicted RBP11.12□□□□□ -0.63
SCARNA20.1-201ENST00000516009 HECW2Q9P2P5 1572 aa11.12□□□□□ -0.63
SCARNA20.1-201ENST00000516009 SLC4A1APQ9BWU0 796 aaKnown RBP11.12□□□□□ -0.63
SCARNA20.1-201ENST00000516009 RICTORQ6R327 1708 aa11.12□□□□□ -0.63
SCARNA20.1-201ENST00000516009 TEX14Q8IWB6 1497 aa11.12□□□□□ -0.63
SCARNA20.1-201ENST00000516009 MYT1LQ9UL68 1186 aa11.11□□□□□ -0.63
SCARNA20.1-201ENST00000516009 NUP155O75694 1391 aa11.11□□□□□ -0.63
SCARNA20.1-201ENST00000516009 EIF2AK4Q9P2K8 1649 aaKnown RBP11.1□□□□□ -0.63
SCARNA20.1-201ENST00000516009 NEUROD1Q13562 356 aa11.1□□□□□ -0.63
SCARNA20.1-201ENST00000516009 SIN3AQ96ST3 1273 aa11.1□□□□□ -0.63
SCARNA20.1-201ENST00000516009 MLH3Q9UHC1 1453 aa11.1□□□□□ -0.63
SCARNA20.1-201ENST00000516009 IQGAP3Q86VI3 1631 aa11.09□□□□□ -0.63
SCARNA20.1-201ENST00000516009 MAGI2Q86UL8 1455 aa11.08□□□□□ -0.64
SCARNA20.1-201ENST00000516009 TIMELESSQ9UNS1 1208 aa11.08□□□□□ -0.64
SCARNA20.1-201ENST00000516009 DEPDC5O75140 1603 aa11.08□□□□□ -0.64
SCARNA20.1-201ENST00000516009 FAM135AQ9P2D6 1515 aa11.08□□□□□ -0.64
SCARNA20.1-201ENST00000516009 ABCA6Q8N139 1617 aa11.07□□□□□ -0.64
SCARNA20.1-201ENST00000516009 DHX29Q7Z478 1369 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms