RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 ARHGAP5Q13017 1502 aa31.56■■■□□ 2.64
DDR1-280ENST00000515881 MAGI2Q86UL8 1455 aa31.54■■■□□ 2.64
DDR1-280ENST00000515881 ARID4BQ4LE39 1312 aaPredicted RBP31.53■■■□□ 2.64
DDR1-280ENST00000515881 ZFYVE16Q7Z3T8 1539 aa31.53■■■□□ 2.64
DDR1-280ENST00000515881 YEATS2Q9ULM3 1422 aa31.52■■■□□ 2.64
DDR1-280ENST00000515881 CEP162Q5TB80 1403 aa31.51■■■□□ 2.64
DDR1-280ENST00000515881 ADAMTSL3P82987 1691 aa31.49■■■□□ 2.63
DDR1-280ENST00000515881 BCORL1Q5H9F3 1711 aa31.45■■■□□ 2.63
DDR1-280ENST00000515881 PREX2Q70Z35 1606 aa31.45■■■□□ 2.62
DDR1-280ENST00000515881 ZNF518AQ6AHZ1 1483 aa31.44■■■□□ 2.62
DDR1-280ENST00000515881 CDC42BPBQ9Y5S2 1711 aa31.42■■■□□ 2.62
DDR1-280ENST00000515881 PTPRMP28827 1452 aa31.41■■■□□ 2.62
DDR1-280ENST00000515881 AFAP1Q8N556 730 aa31.39■■■□□ 2.62
DDR1-280ENST00000515881 KDM5CP41229 1560 aa31.38■■■□□ 2.61
DDR1-280ENST00000515881 HECW2Q9P2P5 1572 aa31.38■■■□□ 2.61
DDR1-280ENST00000515881 MADDQ8WXG6 1647 aa31.37■■■□□ 2.61
DDR1-280ENST00000515881 ABCC1P33527 1531 aa31.36■■■□□ 2.61
DDR1-280ENST00000515881 ATP10AO60312 1499 aa31.36■■■□□ 2.61
DDR1-280ENST00000515881 LOC105371045A0A1W2PR82 267 aa31.35■■■□□ 2.61
DDR1-280ENST00000515881 MTUS2Q5JR59 1369 aa31.34■■■□□ 2.61
DDR1-280ENST00000515881 CDC42BPAQ5VT25 1732 aa31.34■■■□□ 2.61
DDR1-280ENST00000515881 SIGLEC1Q9BZZ2 1709 aa31.34■■■□□ 2.61
DDR1-280ENST00000515881 ARHGEF12Q9NZN5 1544 aa31.34■■■□□ 2.61
DDR1-280ENST00000515881 C9orf84Q5VXU9 1444 aa31.33■■■□□ 2.61
DDR1-280ENST00000515881 GPATCH8Q9UKJ3 1502 aaKnown RBP31.33■■■□□ 2.61
DDR1-280ENST00000515881 TRAPPC8Q9Y2L5 1435 aa31.31■■■□□ 2.6
DDR1-280ENST00000515881 MYT1LQ9UL68 1186 aa31.28■■■□□ 2.6
DDR1-280ENST00000515881 MLH3Q9UHC1 1453 aa31.27■■■□□ 2.6
DDR1-280ENST00000515881 CCNB3Q8WWL7 1395 aa31.27■■■□□ 2.6
DDR1-280ENST00000515881 ITSN2Q9NZM3 1697 aa31.26■■■□□ 2.6
DDR1-280ENST00000515881 MLECQ14165 292 aa31.26■■■□□ 2.59
DDR1-280ENST00000515881 ZNF777Q9ULD5 760 aaPredicted RBP31.26■■■□□ 2.59
DDR1-280ENST00000515881 EHBP1L1Q8N3D4 1523 aa31.25■■■□□ 2.59
DDR1-280ENST00000515881 SAMD9LQ8IVG5 1584 aa31.24■■■□□ 2.59
DDR1-280ENST00000515881 RIMS1Q86UR5 1692 aaKnown RBP31.24■■■□□ 2.59
DDR1-280ENST00000515881 DIP2CQ9Y2E4 1556 aa31.23■■■□□ 2.59
DDR1-280ENST00000515881 CFDP1Q9UEE9 299 aaPredicted RBP31.23■■■□□ 2.59
DDR1-280ENST00000515881 SYCP2Q9BX26 1530 aa31.19■■■□□ 2.58
DDR1-280ENST00000515881 ABCA6Q8N139 1617 aa31.19■■■□□ 2.58
DDR1-280ENST00000515881 REREQ9P2R6 1566 aa31.18■■■□□ 2.58
DDR1-280ENST00000515881 VPS8Q8N3P4 1428 aa31.17■■■□□ 2.58
DDR1-280ENST00000515881 PLEKHH2Q8IVE3 1493 aa31.17■■■□□ 2.58
DDR1-280ENST00000515881 KIAA1107Q9UPP5 1409 aa31.16■■■□□ 2.58
DDR1-280ENST00000515881 TIAM1Q13009 1591 aa31.16■■■□□ 2.58
DDR1-280ENST00000515881 HNRNPMP52272 730 aaKnown RBP eCLIP31.15■■■□□ 2.58
DDR1-280ENST00000515881 FER1L4A9Z1Z3 1794 aa31.12■■■□□ 2.57
DDR1-280ENST00000515881 KIDINS220Q9ULH0 1771 aa31.11■■■□□ 2.57
DDR1-280ENST00000515881 SPAG9O60271 1321 aaKnown RBP31.1■■■□□ 2.57
DDR1-280ENST00000515881 PLPPR3Q6T4P5 718 aa31.1■■■□□ 2.57
DDR1-280ENST00000515881 AGLP35573 1532 aa31.08■■■□□ 2.57
DDR1-280ENST00000515881 LMTK3Q96Q04 1460 aa31.08■■■□□ 2.57
DDR1-280ENST00000515881 NCOA2Q15596 1464 aa31.07■■■□□ 2.56
DDR1-280ENST00000515881 ZNF644Q9H582 1327 aaPredicted RBP31.06■■■□□ 2.56
DDR1-280ENST00000515881 SUPT6HQ7KZ85 1726 aaKnown RBP31.03■■■□□ 2.56
DDR1-280ENST00000515881 ATP7AQ04656 1500 aa31.02■■■□□ 2.56
DDR1-280ENST00000515881 INO80Q9ULG1 1556 aaPredicted RBP31■■■□□ 2.55
DDR1-280ENST00000515881 LRRC9Q6ZRR7 1453 aa31■■■□□ 2.55
DDR1-280ENST00000515881 MBD5Q9P267 1494 aa31■■■□□ 2.55
DDR1-280ENST00000515881 CEBPAP49715 358 aaPredicted RBP30.96■■■□□ 2.55
DDR1-280ENST00000515881 MAP3K1Q13233 1512 aa30.96■■■□□ 2.55
DDR1-280ENST00000515881 ESF1Q9H501 851 aaKnown RBP30.92■■■□□ 2.54
DDR1-280ENST00000515881 A2MP01023 1474 aa30.92■■■□□ 2.54
DDR1-280ENST00000515881 CAMSAP2Q08AD1 1489 aa30.92■■■□□ 2.54
DDR1-280ENST00000515881 HSPA2P54652 639 aa30.9■■■□□ 2.54
DDR1-280ENST00000515881 KANK4Q5T7N3 995 aaPredicted RBP30.9■■■□□ 2.54
DDR1-280ENST00000515881 PLXNC1O60486 1568 aa30.9■■■□□ 2.54
DDR1-280ENST00000515881 RTEL1-TNFRSF6BF6WH68 1400 aa30.88■■■□□ 2.53
DDR1-280ENST00000515881 CNTLNQ9NXG0 1405 aa30.88■■■□□ 2.53
DDR1-280ENST00000515881 CCDC141Q6ZP82 1450 aa30.87■■■□□ 2.53
DDR1-280ENST00000515881 RSPH4AQ5TD94 716 aa30.84■■■□□ 2.53
DDR1-280ENST00000515881 ADGBQ8N7X0 1667 aa30.81■■■□□ 2.52
DDR1-280ENST00000515881 PREX1Q8TCU6 1659 aa30.81■■■□□ 2.52
DDR1-280ENST00000515881 C3P01024 1663 aa30.81■■■□□ 2.52
DDR1-280ENST00000515881 UHRF1BP1Q6BDS2 1440 aa30.78■■■□□ 2.52
DDR1-280ENST00000515881 ARHGEF5Q12774 1597 aa30.78■■■□□ 2.52
DDR1-280ENST00000515881 APLP2Q06481 763 aa30.77■■■□□ 2.52
DDR1-280ENST00000515881 DHX29Q7Z478 1369 aaKnown RBP30.77■■■□□ 2.52
DDR1-280ENST00000515881 MYOM3Q5VTT5 1437 aa30.76■■■□□ 2.51
DDR1-280ENST00000515881 GGT6Q6P531 493 aa30.75■■■□□ 2.51
DDR1-280ENST00000515881 MIA2Q96PC5 1412 aa30.74■■■□□ 2.51
DDR1-280ENST00000515881 ILDR1Q86SU0 546 aaPredicted RBP30.74■■■□□ 2.51
DDR1-280ENST00000515881 ZMYM3Q14202 1370 aa30.73■■■□□ 2.51
DDR1-280ENST00000515881 MROH2AA6NES4 1674 aa30.73■■■□□ 2.51
DDR1-280ENST00000515881 TSPY4P0CV99 314 aa30.72■■■□□ 2.51
DDR1-280ENST00000515881 TSPY10P0CW01 314 aa30.72■■■□□ 2.51
DDR1-280ENST00000515881 PPP6R1Q9UPN7 881 aa30.7■■■□□ 2.51
DDR1-280ENST00000515881 NPATQ14207 1427 aa30.69■■■□□ 2.5
DDR1-280ENST00000515881 CLTCQ00610 1675 aaKnown RBP30.67■■■□□ 2.5
DDR1-280ENST00000515881 SETD1BQ9UPS6 1966 aaKnown RBP30.65■■■□□ 2.5
DDR1-280ENST00000515881 KIF3BO15066 747 aa30.64■■■□□ 2.5
DDR1-280ENST00000515881 MAST1Q9Y2H9 1570 aa30.62■■■□□ 2.49
DDR1-280ENST00000515881 PTPRKQ15262 1439 aa30.59■■■□□ 2.49
DDR1-280ENST00000515881 FAM135AQ9P2D6 1515 aa30.54■■■□□ 2.48
DDR1-280ENST00000515881 DMRT2Q9Y5R5 561 aa30.54■■■□□ 2.48
DDR1-280ENST00000515881 KDM5DQ9BY66 1539 aa30.53■■■□□ 2.48
DDR1-280ENST00000515881 PTPN23Q9H3S7 1636 aa30.53■■■□□ 2.48
DDR1-280ENST00000515881 FGD6Q6ZV73 1430 aa30.53■■■□□ 2.48
DDR1-280ENST00000515881 STRCQ7RTU9 1775 aa30.52■■■□□ 2.48
DDR1-280ENST00000515881 ABCC5O15440 1437 aa30.5■■■□□ 2.47
DDR1-280ENST00000515881 WASHC2CQ9Y4E1 1318 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms