RNA–Protein interactions for RNA: ENST00000515863.1

ATR-210, Transcript of ATR serine/threonine kinase, humanhuman

TSL 2

Gene ATR, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-210ENST00000515863 EMP3P54852 163 aa12.43□□□□□ -0.42
ATR-210ENST00000515863 DOK7Q18PE1 504 aa12.42□□□□□ -0.42
ATR-210ENST00000515863 ZNF710Q8N1W2 664 aa12.42□□□□□ -0.42
ATR-210ENST00000515863 RIMBP2O15034 1052 aa12.37□□□□□ -0.43
ATR-210ENST00000515863 PPP1R37O75864 691 aa12.37□□□□□ -0.43
ATR-210ENST00000515863 FAM205CA6NFA0 338 aa12.35□□□□□ -0.43
ATR-210ENST00000515863 HOXB1P14653 301 aaPredicted RBP12.35□□□□□ -0.43
ATR-210ENST00000515863 HS3ST6Q96QI5 342 aa12.33□□□□□ -0.44
ATR-210ENST00000515863 C2orf72A6NCS6 295 aa12.32□□□□□ -0.44
ATR-210ENST00000515863 KIF3CO14782 793 aa12.31□□□□□ -0.44
ATR-210ENST00000515863 POTEB3A0JP26 581 aa12.3□□□□□ -0.44
ATR-210ENST00000515863 POTEBQ6S5H4 581 aa12.3□□□□□ -0.44
ATR-210ENST00000515863 NKX1-1Q15270 411 aaPredicted RBP12.29□□□□□ -0.44
ATR-210ENST00000515863 DNAJC5Q9H3Z4 198 aa12.29□□□□□ -0.44
ATR-210ENST00000515863 ZSWIM6Q9HCJ5 1215 aa12.29□□□□□ -0.44
ATR-210ENST00000515863 DCAF8L2P0C7V8 631 aa12.27□□□□□ -0.45
ATR-210ENST00000515863 TMC2Q8TDI7 906 aa12.27□□□□□ -0.45
ATR-210ENST00000515863 GPR153Q6NV75 609 aa12.26□□□□□ -0.45
ATR-210ENST00000515863 ERBB3P21860 1342 aa12.25□□□□□ -0.45
ATR-210ENST00000515863 ARSIQ5FYB1 569 aa12.23□□□□□ -0.45
ATR-210ENST00000515863 RYDENQ9NUL5 291 aaKnown RBP12.22□□□□□ -0.45
ATR-210ENST00000515863 VARS2Q5ST30 1063 aaKnown RBP12.19□□□□□ -0.46
ATR-210ENST00000515863 KHSRPQ92945 711 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■□□□ 14.3
ATR-210ENST00000515863 KRTAP3-3Q9BYR6 98 aa12.18□□□□□ -0.46
ATR-210ENST00000515863 KRTAP3-2Q9BYR7 98 aa12.18□□□□□ -0.46
ATR-210ENST00000515863 SPNS2Q8IVW8 549 aa12.15□□□□□ -0.46
ATR-210ENST00000515863 SLC34A2O95436 690 aa12.14□□□□□ -0.47
ATR-210ENST00000515863 GTPBP6O43824 516 aaPredicted RBP12.13□□□□□ -0.47
ATR-210ENST00000515863 GPHNQ9NQX3 736 aaPredicted RBP12.13□□□□□ -0.47
ATR-210ENST00000515863 PCDHGA4Q9Y5G9 962 aa12.12□□□□□ -0.47
ATR-210ENST00000515863 RB1CC1Q8TDY2 1594 aa12.12□□□□□ -0.47
ATR-210ENST00000515863 NUDT7P0C024 238 aa12.11□□□□□ -0.47
ATR-210ENST00000515863 FOXK1P85037 733 aa12.11□□□□□ -0.47
ATR-210ENST00000515863 ZNF316A6NFI3 1004 aaPredicted RBP12.1□□□□□ -0.47
ATR-210ENST00000515863 PLPP6Q8IY26 295 aa12.1□□□□□ -0.47
ATR-210ENST00000515863 MMRN1Q13201 1228 aa12.09□□□□□ -0.47
ATR-210ENST00000515863 DSG2Q14126 1118 aa12.09□□□□□ -0.47
ATR-210ENST00000515863 ZNF687Q8N1G0 1237 aa12.09□□□□□ -0.47
ATR-210ENST00000515863 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
ATR-210ENST00000515863 CRISPLD2Q9H0B8 497 aa12.04□□□□□ -0.48
ATR-210ENST00000515863 LHX6Q9UPM6 363 aa12.04□□□□□ -0.48
ATR-210ENST00000515863 NACADO15069 1562 aa12.04□□□□□ -0.48
ATR-210ENST00000515863 PTCD2Q8WV60 388 aaKnown RBP12.03□□□□□ -0.48
ATR-210ENST00000515863 NCKAP5LQ9HCH0 1330 aa12□□□□□ -0.49
ATR-210ENST00000515863 PDE4AP27815 886 aa11.99□□□□□ -0.49
ATR-210ENST00000515863 RTN4Q9NQC3 1192 aaKnown RBP11.99□□□□□ -0.49
ATR-210ENST00000515863 PPP1R15BQ5SWA1 713 aa11.98□□□□□ -0.49
ATR-210ENST00000515863 KDM4FA0A1W2PPD8 638 aa11.96□□□□□ -0.49
ATR-210ENST00000515863 TBC1D12O60347 775 aa11.96□□□□□ -0.49
ATR-210ENST00000515863 UPF1Q92900 1129 aaKnown RBP eCLIP11.95□□□□□ -0.5
ATR-210ENST00000515863 BBXQ8WY36 941 aaPredicted RBP11.94□□□□□ -0.5
ATR-210ENST00000515863 LARP6Q9BRS8 491 aaKnown RBP11.94□□□□□ -0.5
ATR-210ENST00000515863 MYO15BQ96JP2 1530 aa11.92□□□□□ -0.5
ATR-210ENST00000515863 PSDA5PKW4 1024 aaPredicted RBP11.92□□□□□ -0.5
ATR-210ENST00000515863 OXER1Q8TDS5 423 aa11.92□□□□□ -0.5
ATR-210ENST00000515863 PBX2P40425 430 aa11.91□□□□□ -0.5
ATR-210ENST00000515863 ANKRD13DQ6ZTN6 518 aa11.91□□□□□ -0.5
ATR-210ENST00000515863 DDX27Q96GQ7 796 aaKnown RBP11.91□□□□□ -0.5
ATR-210ENST00000515863 UNC13AQ9UPW8 1703 aa11.9□□□□□ -0.5
ATR-210ENST00000515863 AXIN2Q9Y2T1 843 aa11.9□□□□□ -0.5
ATR-210ENST00000515863 LSM11P83369 360 aaKnown RBP eCLIP11.89□□□□□ -0.51
ATR-210ENST00000515863 POTEEQ6S8J3 1075 aa11.89□□□□□ -0.51
ATR-210ENST00000515863 CADPS2Q86UW7 1296 aa11.89□□□□□ -0.51
ATR-210ENST00000515863 MFSD10Q14728 455 aa11.87□□□□□ -0.51
ATR-210ENST00000515863 MYT1LQ9UL68 1186 aa11.85□□□□□ -0.51
ATR-210ENST00000515863 PPP4R3BQ5MIZ7 849 aa11.84□□□□□ -0.51
ATR-210ENST00000515863 RNF166Q96A37 237 aaPredicted RBP11.84□□□□□ -0.51
ATR-210ENST00000515863 BICRAQ9NZM4 1560 aa11.84□□□□□ -0.51
ATR-210ENST00000515863 ARHGAP33O14559 1287 aa11.83□□□□□ -0.52
ATR-210ENST00000515863 PTGER2P43116 358 aa11.83□□□□□ -0.52
ATR-210ENST00000515863 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.82□□□□□ -0.52
ATR-210ENST00000515863 SPRYD3Q8NCJ5 442 aa11.81□□□□□ -0.52
ATR-210ENST00000515863 ZNF454Q8N9F8 522 aa11.79□□□□□ -0.52
ATR-210ENST00000515863 EMILIN3Q9NT22 766 aa11.79□□□□□ -0.52
ATR-210ENST00000515863 EVI5O60447 810 aa11.78□□□□□ -0.52
ATR-210ENST00000515863 PSEN2P49810 448 aa11.78□□□□□ -0.52
ATR-210ENST00000515863 MAP3K9P80192 1104 aa11.78□□□□□ -0.52
ATR-210ENST00000515863 DMRTA1Q5VZB9 504 aa11.76□□□□□ -0.53
ATR-210ENST00000515863 SHROOM4Q9ULL8 1493 aa11.76□□□□□ -0.53
ATR-210ENST00000515863 ADGRD1Q6QNK2 874 aa11.75□□□□□ -0.53
ATR-210ENST00000515863 ANO8Q9HCE9 1232 aaPredicted RBP11.75□□□□□ -0.53
ATR-210ENST00000515863 PAXIP1Q6ZW49 1069 aaPredicted RBP11.74□□□□□ -0.53
ATR-210ENST00000515863 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
ATR-210ENST00000515863 KCNK17Q96T54 332 aa11.74□□□□□ -0.53
ATR-210ENST00000515863 FOSBP53539 338 aa11.73□□□□□ -0.53
ATR-210ENST00000515863 KCNH8Q96L42 1107 aa11.72□□□□□ -0.53
ATR-210ENST00000515863 TK2O00142 265 aa11.71□□□□□ -0.53
ATR-210ENST00000515863 JPH4Q96JJ6 628 aa11.71□□□□□ -0.53
ATR-210ENST00000515863 CAMK2BQ13554 666 aa11.7□□□□□ -0.54
ATR-210ENST00000515863 BCL2L12Q9HB09 334 aa11.7□□□□□ -0.54
ATR-210ENST00000515863 DCAF1Q9Y4B6 1507 aa11.67□□□□□ -0.54
ATR-210ENST00000515863 ZDHHC16Q969W1 377 aa11.67□□□□□ -0.54
ATR-210ENST00000515863 DPYSL4O14531 572 aa11.66□□□□□ -0.54
ATR-210ENST00000515863 HRO43593 1189 aa11.65□□□□□ -0.54
ATR-210ENST00000515863 PTPREP23469 700 aa11.65□□□□□ -0.54
ATR-210ENST00000515863 ADAM33Q9BZ11 813 aa11.65□□□□□ -0.54
ATR-210ENST00000515863 PCDHGA10Q9Y5H3 936 aa11.63□□□□□ -0.55
ATR-210ENST00000515863 VPS9D1Q9Y2B5 631 aa11.62□□□□□ -0.55
ATR-210ENST00000515863 STAC3Q96MF2 364 aa11.61□□□□□ -0.55
ATR-210ENST00000515863 PHF14O94880 888 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms